RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 IL9P15248 144 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
UBR4-208ENST00000459947 ZNF165P49910 485 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 CYP27A1Q02318 531 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 ANO6Q4KMQ2 910 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 SPATA31D4Q6ZUB0 917 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 GJD3Q8N144 294 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 ATAD1Q8NBU5 361 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 SEMA4DQ92854 862 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 TMEM176AQ96HP8 235 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 POMKQ9H5K3 350 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 CRTAC1Q9NQ79 661 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 CISHQ9NSE2 258 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 GTF3C4Q9UKN8 822 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 GOLGA6L19H0YKK7 550 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 RFPL2O75678 378 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 RHOP08100 348 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 FAM200BP0CF97 657 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 ALADP13716 330 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 GBP2P32456 591 aaPredicted RBP11.37□□□□□ -0.59
UBR4-208ENST00000459947 SNX16P57768 344 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 FAM35AQ86V20 835 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 MYRFLQ96LU7 910 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 FBXO44Q9H4M3 255 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 OBP2AQ9NY56 170 aa11.37□□□□□ -0.59
UBR4-208ENST00000459947 PDGFRBP09619 1106 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 ACAT1P24752 427 aaKnown RBP11.36□□□□□ -0.59
UBR4-208ENST00000459947 KCNQ1P51787 676 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 SGO2Q562F6 1265 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 IRF2BP1Q8IU81 584 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 UBALD2Q8IYN6 164 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 PPM1KQ8N3J5 372 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 MRPS31Q92665 395 aaKnown RBP11.36□□□□□ -0.59
UBR4-208ENST00000459947 PGLYRP2Q96PD5 576 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 PLCB1Q9NQ66 1216 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 APEX2Q9UBZ4 518 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 BRCA2P51587 3418 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 TPM3P06753 285 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 SETSIPP0DME0 302 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 GRIK1P39086 918 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 CORO1BQ9BR76 489 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 PI4K2AQ9BTU6 479 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 TTLL2Q9BWV7 592 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 MYBPHLA2RUH7 354 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 C11orf57Q6ZUT1 292 aaPredicted RBP11.36□□□□□ -0.59
UBR4-208ENST00000459947 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
UBR4-208ENST00000459947 DNAJB7Q7Z6W7 309 aaPredicted RBP11.36□□□□□ -0.59
UBR4-208ENST00000459947 LRRTM3Q86VH5 581 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 SCN4BQ8IWT1 228 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 ARHGAP18Q8N392 663 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 UBR7Q8N806 425 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 SLITRK1Q96PX8 696 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 TMEM209Q96SK2 561 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 CEP72Q9P209 647 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 PCDHB4Q9Y5E5 795 aa11.36□□□□□ -0.59
UBR4-208ENST00000459947 SLC38A8A6NNN8 435 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 PES1O00541 588 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 PSMC1P62191 440 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 SPOPLQ6IQ16 392 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 TADA2BQ86TJ2 420 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 AOPEPQ8N6M6 819 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 EEF2KMTQ96G04 330 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CDK5RAP1Q96SZ6 601 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 APOL5Q9BWW9 433 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 TMEM51Q9NW97 253 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 DNMT3BQ9UBC3 853 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 CNTN6Q9UQ52 1028 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 WEE2P0C1S8 567 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CCDC172P0C7W6 258 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 BCAT1P54687 386 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 RBM10P98175 930 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 TRIM65Q6PJ69 517 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 DENND5BQ6ZUT9 1274 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 ACOT1Q86TX2 421 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 FAM84AQ96KN4 292 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 MED15Q96RN5 788 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 B3GNT5Q9BYG0 378 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 LGALS16A8MUM7 142 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 VNN2O95498 520 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 MYL4P12829 197 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 LMO2P25791 158 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 RAP1GAPP47736 663 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 PSEN1P49768 467 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CDH8P55286 799 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 PRSS36Q5K4E3 855 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 GET4Q7L5D6 327 aaPredicted RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 TMEM130Q8N3G9 435 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 STKLD1Q8NE28 680 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 LMO3Q8TAP4 145 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 DEPDC1BQ8WUY9 529 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 TRIM62Q9BVG3 475 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 TASP1Q9H6P5 420 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 TRPM5Q9NZQ8 1165 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 DNAH12Q6ZR08 3092 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms