RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 USP18Q9UMW8 372 aa12.89□□□□□ -0.35
TTC3-208ENST00000428693 CCL26Q9Y258 94 aa12.89□□□□□ -0.35
TTC3-208ENST00000428693 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
TTC3-208ENST00000428693 GPR179Q6PRD1 2367 aa12.89□□□□□ -0.35
TTC3-208ENST00000428693 FANCMQ8IYD8 2048 aa12.89□□□□□ -0.35
TTC3-208ENST00000428693 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 OTOGLQ3ZCN5 2332 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 MYBPHLA2RUH7 354 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 PHACTR2O75167 634 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 ATP2C2O75185 946 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 F13A1P00488 732 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 F11P03951 625 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
TTC3-208ENST00000428693 GRIK1P39086 918 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 TRPC3Q13507 836 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 SNRNP35Q16560 246 aaKnown RBP12.88□□□□□ -0.35
TTC3-208ENST00000428693 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 Q6ZS52 159 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 WDR49Q8IV35 697 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
TTC3-208ENST00000428693 SNX21Q969T3 373 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 MSANTD3Q96H12 275 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 SYT15Q9BQS2 421 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 KIAA1586Q9HCI6 787 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 AGPAT3Q9NRZ7 376 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 GDAP2Q9NXN4 497 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 MAGEC2Q9UBF1 373 aaPredicted RBP12.88□□□□□ -0.35
TTC3-208ENST00000428693 UXTQ9UBK9 157 aaPredicted RBP12.88□□□□□ -0.35
TTC3-208ENST00000428693 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
TTC3-208ENST00000428693 NUP210Q8TEM1 1887 aaPredicted RBP12.88□□□□□ -0.35
TTC3-208ENST00000428693 KIF26AQ9ULI4 1882 aaPredicted RBP12.87□□□□□ -0.35
TTC3-208ENST00000428693 CHURC1-FNTBB4DL54 471 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
TTC3-208ENST00000428693 ABL1P00519 1130 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 CKMP06732 381 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 BDNFP23560 247 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 LMO2P25791 158 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 DDX6P26196 483 aaKnown RBP eCLIP12.87□□□□□ -0.35
TTC3-208ENST00000428693 ANXA13P27216 316 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 FNTBP49356 437 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 TNNC1P63316 161 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 GAS6Q14393 721 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 DGKKQ5KSL6 1271 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 XXYLT1Q8NBI6 393 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 ZNF507Q8TCN5 953 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 LEO1Q8WVC0 666 aaPredicted RBP12.87□□□□□ -0.35
TTC3-208ENST00000428693 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 CYP2S1Q96SQ9 504 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 IER2Q9BTL4 223 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 FAM126AQ9BYI3 521 aaPredicted RBP12.87□□□□□ -0.35
TTC3-208ENST00000428693 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
TTC3-208ENST00000428693 ZMYM5Q9UJ78 669 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 CFAP45Q9UL16 551 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 ATG2BQ96BY7 2078 aa12.87□□□□□ -0.35
TTC3-208ENST00000428693 COL4A2P08572 1712 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 TRAV19A0A0A6YYK7 116 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 EXOC3O60645 756 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 ARSAP15289 507 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 HOXD13P35453 343 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 GNL1P36915 607 aaPredicted RBP12.86□□□□□ -0.35
TTC3-208ENST00000428693 MLLT6P55198 1093 aaPredicted RBP12.86□□□□□ -0.35
TTC3-208ENST00000428693 DNM1Q05193 864 aaKnown RBP12.86□□□□□ -0.35
TTC3-208ENST00000428693 DMWDQ09019 674 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.35
TTC3-208ENST00000428693 IFRD2Q12894 506 aaPredicted RBP12.86□□□□□ -0.35
TTC3-208ENST00000428693 BIRC3Q13489 604 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 CUL4BQ13620 913 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 RUNX3Q13761 415 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 PKP1Q13835 747 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 SIM2Q14190 667 aaPredicted RBP12.86□□□□□ -0.35
TTC3-208ENST00000428693 KCNB1Q14721 858 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 CEP68Q76N32 757 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 DGLUCYQ7Z3D6 616 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 MON1AQ86VX9 555 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 CGRRF1Q99675 332 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 SERTAD1Q9UHV2 236 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 CDH9Q9ULB4 789 aa12.86□□□□□ -0.35
TTC3-208ENST00000428693 DMXL1Q9Y485 3027 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 GABRDO14764 452 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 TGFB1I1O43294 461 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 LILRB5O75023 590 aa12.85□□□□□ -0.35
TTC3-208ENST00000428693 NOL4O94818 638 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms