RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 GREB1Q4ZG55 1949 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ZNF638Q14966 1978 aaKnown RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 TM4SF5O14894 197 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 HUS1O60921 280 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 CCDC192P0DO97 292 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 GJA4P35212 333 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 CASP5P51878 434 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 LIMK1P53667 647 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 RPL10AP62906 217 aaKnown RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 AMPD2Q01433 879 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 MTF1Q14872 753 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 PDGFRLQ15198 375 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 INTS6LQ5JSJ4 861 aaKnown RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 OSTM1Q86WC4 334 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 LRRC52Q8N7C0 313 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 DDX1Q92499 740 aaKnown RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 EZH1Q92800 747 aaPredicted RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 MYRFLQ96LU7 910 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 ACCSQ96QU6 501 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 SLC22A12Q96S37 553 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 CYP2S1Q96SQ9 504 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 P2RY13Q9BPV8 354 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 RBAKQ9NYW8 714 aaPredicted RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 UXTQ9UBK9 157 aaPredicted RBP14.82□□□□□ -0.04
CXCL12-202ENST00000374426 GTF3C4Q9UKN8 822 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 EXOC7Q9UPT5 735 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 CLIC4Q9Y696 253 aa14.82□□□□□ -0.04
CXCL12-202ENST00000374426 TULP1O00294 542 aaPredicted RBP14.81□□□□□ -0.04
CXCL12-202ENST00000374426 HCRTO43612 131 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 AKAP3O75969 853 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 GCNT3O95395 438 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 GAP43P17677 238 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 DRD1P21728 446 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 KCNA4P22459 653 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 FAM160A1Q05DH4 1040 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 ZNF77Q15935 545 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 PLA2G2CQ5R387 149 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 IL31Q6EBC2 164 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 TMEM86AQ8N2M4 240 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 CAMKK1Q8N5S9 505 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 CSGALNACT2Q8N6G5 542 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 C12orf50Q8NA57 414 aaPredicted RBP14.81□□□□□ -0.04
CXCL12-202ENST00000374426 ZC3H10Q96K80 434 aaKnown RBP14.81□□□□□ -0.04
CXCL12-202ENST00000374426 HHIPQ96QV1 700 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 FGFBP2Q9BYJ0 223 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 SMOC1Q9H4F8 434 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 ECT2Q9H8V3 914 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 TRPC7Q9HCX4 862 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 OLFML3Q9NRN5 406 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 GDAP2Q9NXN4 497 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 SIX4Q9UIU6 781 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 FBXO2Q9UK22 296 aaPredicted RBP14.81□□□□□ -0.04
CXCL12-202ENST00000374426 ITGA11Q9UKX5 1188 aa14.81□□□□□ -0.04
CXCL12-202ENST00000374426 EML5Q05BV3 1969 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 GOLGA8IPA6NC78 632 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 GABRDO14764 452 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 GARTP22102 1010 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 MYL7Q01449 175 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 USP4Q13107 963 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 ST3GAL2Q16842 350 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 PLK5Q496M5 336 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 CFAP221Q4G0U5 840 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 FBXO43Q4G163 708 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 RRAGBQ5VZM2 374 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 SV2BQ7L1I2 683 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 ADGRF2Q8IZF7 708 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 CPA6Q8N4T0 437 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 TTC16Q8NEE8 873 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 RPLP0P6Q8NHW5 317 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 CACTINQ8WUQ7 758 aaKnown RBP14.8□□□□□ -0.04
CXCL12-202ENST00000374426 OSCP1Q8WVF1 389 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 CLIC6Q96NY7 704 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 CBWD1Q9BRT8 395 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 MTMR12Q9C0I1 747 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 TMEM206Q9H813 350 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 PDE11AQ9HCR9 933 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 DUS2Q9NX74 493 aaKnown RBP14.8□□□□□ -0.04
CXCL12-202ENST00000374426 CCDC39Q9UFE4 941 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 PCDHGA5Q9Y5G8 931 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 SRPRBQ9Y5M8 271 aaKnown RBP14.8□□□□□ -0.04
CXCL12-202ENST00000374426 SNX9Q9Y5X1 595 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 WNT6Q9Y6F9 365 aa14.8□□□□□ -0.04
CXCL12-202ENST00000374426 TRAV19A0A0A6YYK7 116 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 VPS37CA5D8V6 355 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 LDHAP00338 332 aaKnown RBP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 CKMP06732 381 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 KRT19P08727 400 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 USP17L7P0C7H9 530 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 MPLP40238 635 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 SOWAHAQ2M3V2 549 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 EML3Q32P44 896 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 N4BP2L1Q5TBK1 243 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 STPG1Q5TH74 334 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 SYT13Q7L8C5 426 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 SPATA2LQ8IUW3 424 aaPredicted RBP14.79□□□□□ -0.04
CXCL12-202ENST00000374426 ASPMQ8IZT6 3477 aa14.79□□□□□ -0.04
CXCL12-202ENST00000374426 TOP6BLQ8N6T0 577 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms