RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 GLB1LQ6UWU2 654 aa23.94■■□□□ 1.42
CDX1-201ENST00000231656 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.94■■□□□ 1.42
CDX1-201ENST00000231656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.93■■□□□ 1.42
CDX1-201ENST00000231656 PYGMP11217 842 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 GRIK3Q13003 919 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 SND1Q7KZF4 910 aaKnown RBP eCLIP23.93■■□□□ 1.42
CDX1-201ENST00000231656 FGFR1P11362 822 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 RAG1P15918 1043 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 PNPLA4P41247 253 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 SLC1A1P43005 524 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 PPP2R5EQ16537 467 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 SEL1L2Q5TEA6 688 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 CNKSR3Q6P9H4 555 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 ZNF560Q96MR9 790 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 SMYD3Q9H7B4 428 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 MRPL47Q9HD33 250 aaKnown RBP23.93■■□□□ 1.42
CDX1-201ENST00000231656 CACNG4Q9UBN1 327 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 AMACRQ9UHK6 382 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 NFU1Q9UMS0 254 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 PCDHB7Q9Y5E2 793 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 SCINQ9Y6U3 715 aa23.93■■□□□ 1.42
CDX1-201ENST00000231656 MYO1FO00160 1098 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 PROSCO94903 275 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 CDH8P55286 799 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 RWDD2BP57060 319 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 NNTQ13423 1086 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 TRADDQ15628 312 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 WDTC1Q8N5D0 677 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 EIF1ADQ8N9N8 165 aaKnown RBP23.92■■□□□ 1.42
CDX1-201ENST00000231656 TMEM35BQ8NCS4 154 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 C1orf131Q8NDD1 294 aaKnown RBP23.92■■□□□ 1.42
CDX1-201ENST00000231656 CCDC26Q8TAB7 109 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 ZNF518BQ9C0D4 1074 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 ACBD3Q9H3P7 528 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 CYP3A43Q9HB55 503 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 SNX9Q9Y5X1 595 aa23.92■■□□□ 1.42
CDX1-201ENST00000231656 GOLGA6L10A0A0M3HER8 536 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 SPTLC1O15269 473 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 AARSP49588 968 aaKnown RBP eCLIP23.91■■□□□ 1.42
CDX1-201ENST00000231656 TAF6P49848 677 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 RAD23BP54727 409 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 GPS2Q13227 327 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 ADAT2Q7Z6V5 191 aaKnown RBP23.91■■□□□ 1.42
CDX1-201ENST00000231656 CRIPAKQ8N1N5 446 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 WHAMMQ8TF30 809 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 IFT81Q8WYA0 676 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 KPNA7A9QM74 516 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 PAEPP09466 180 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 CSF2RAP15509 400 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 CLCNKBP51801 687 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 LILRA4P59901 499 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 IKBKEQ14164 716 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 NOMO2Q5JPE7 1267 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 MFSD5Q6N075 450 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 MAATS1Q7Z4T9 603 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 ZDHHC14Q8IZN3 488 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 PARVAQ9NVD7 372 aa23.91■■□□□ 1.42
CDX1-201ENST00000231656 TCRBV5S1A1TA0A578 114 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 CASTOR2A6NHX0 329 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 CALB1P05937 261 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 RPL9P32969 192 aaKnown RBP23.9■■□□□ 1.42
CDX1-201ENST00000231656 GABPB1Q06547 395 aaPredicted RBP23.9■■□□□ 1.42
CDX1-201ENST00000231656 TUSC3Q13454 348 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 SV2CQ496J9 727 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 SLC13A5Q86YT5 568 aaPredicted RBP23.9■■□□□ 1.42
CDX1-201ENST00000231656 SEC14L1Q92503 715 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 PAAF1Q9BRP4 392 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 LRFN2Q9ULH4 789 aa23.9■■□□□ 1.42
CDX1-201ENST00000231656 PODXLO00592 558 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 TTI1O43156 1089 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 CILPO75339 1184 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 IGFBP6P24592 240 aaPredicted RBP23.89■■□□□ 1.42
CDX1-201ENST00000231656 CUL1Q13616 776 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 UPP1Q16831 310 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 DENND1BQ6P3S1 775 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 TMEM199Q8N511 208 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 PRELID2Q8N945 189 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 SLC4A11Q8NBS3 891 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 FEZF2Q8TBJ5 459 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 URGCPQ8TCY9 931 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 TWNKQ96RR1 684 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 ELOVL4Q9GZR5 314 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.89■■□□□ 1.42
CDX1-201ENST00000231656 GDAP2Q9NXN4 497 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 PCDH10Q9P2E7 1040 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 HMGXB4Q9UGU5 601 aa23.89■■□□□ 1.42
CDX1-201ENST00000231656 LTBP2Q14767 1821 aa23.89■■□□□ 1.41
CDX1-201ENST00000231656 PHF2O75151 1096 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 FAM153BP0C7A2 387 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 ECHS1P30084 290 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 FAM153CQ494X1 144 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.88■■□□□ 1.41
CDX1-201ENST00000231656 LHX5Q9H2C1 402 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 FAM124BQ9H5Z6 455 aaPredicted RBP23.88■■□□□ 1.41
CDX1-201ENST00000231656 KANSL3Q9P2N6 904 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 FAM153AQ9UHL3 310 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 MED7O43513 233 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 GJB6O95452 261 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 CD19P15391 556 aa23.88■■□□□ 1.41
CDX1-201ENST00000231656 MAN1A1P33908 653 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms