RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 GABRDO14764 452 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 PSTPIP1O43586 416 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 NBNO60934 754 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 PFKMP08237 780 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 KRT3P12035 628 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 ZNF211Q13398 564 aaPredicted RBP19.16■□□□□ 0.66
VIM-201ENST00000224237 TUSC3Q13454 348 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 BRD3Q15059 726 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 C8orf74Q6P047 294 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 WDR93Q6P2C0 686 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 TTC30AQ86WT1 665 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 RUBCNQ92622 972 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 CRISPLD2Q9H0B8 497 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 ST7Q9NRC1 585 aa19.16■□□□□ 0.66
VIM-201ENST00000224237 KRIT1O00522 736 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 HCRTO43612 131 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 PAX3P23760 479 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 AARSP49588 968 aaKnown RBP eCLIP19.15■□□□□ 0.66
VIM-201ENST00000224237 CLCN6P51797 869 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 LBX1P52954 281 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 FAM189BP81408 668 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 PIGHQ14442 188 aaPredicted RBP19.15■□□□□ 0.66
VIM-201ENST00000224237 LONRF2Q1L5Z9 754 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 WSCD1Q658N2 575 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 GLB1LQ6UWU2 654 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 DSTYKQ6XUX3 929 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 OSTM1Q86WC4 334 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 RHOT1Q8IXI2 618 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 B3GALNT2Q8NCR0 500 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 C3orf58Q8NDZ4 430 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 FNIP1Q8TF40 1166 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 MCRS1Q96EZ8 462 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 LRRC1Q9BTT6 524 aa19.15■□□□□ 0.66
VIM-201ENST00000224237 GOLGA8SH3BPF8 625 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 CAPN15O75808 1086 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 LHX1P48742 406 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 BCAT1P54687 386 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 SNX16P57768 344 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 FBXO46Q6PJ61 603 aaPredicted RBP19.14■□□□□ 0.65
VIM-201ENST00000224237 NIPA2Q8N8Q9 360 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 ANKRD52Q8NB46 1076 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 STK32AQ8WU08 396 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 PAAF1Q9BRP4 392 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 TET1Q8NFU7 2136 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 GOLGA6L10A0A0M3HER8 536 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 PYGMP11217 842 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 CCDC130P13994 396 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 BST2Q10589 180 aaKnown RBP19.14■□□□□ 0.65
VIM-201ENST00000224237 PLEKHG4Q58EX7 1191 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 SLC39A5Q6ZMH5 540 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 SLC35F5Q8WV83 523 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 KRT12Q99456 494 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 AP1M1Q9BXS5 423 aa19.14■□□□□ 0.65
VIM-201ENST00000224237 E5RJQ4 531 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 B3GAT3O94766 335 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 VSNL1P62760 191 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 ZNF252P-AS1Q0IIN9 211 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 TRIM60Q495X7 471 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 PMF1Q6P1K2 205 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 ANKRD33Q7Z3H0 272 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 SPATA18Q8TC71 538 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 URGCPQ8TCY9 931 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 APBB2Q92870 758 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 SLC4A5Q9BY07 1137 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 METTL5Q9NRN9 209 aaKnown RBP19.13■□□□□ 0.65
VIM-201ENST00000224237 DDX43Q9NXZ2 648 aaKnown RBP19.13■□□□□ 0.65
VIM-201ENST00000224237 USTQ9Y2C2 406 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 SCN5AQ14524 2016 aa19.13■□□□□ 0.65
VIM-201ENST00000224237 ERLIN1O75477 346 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 ODC1P11926 461 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 COL6A1P12109 1028 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 ADORA2BP29275 332 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 RFC1P35251 1148 aaPredicted RBP19.12■□□□□ 0.65
VIM-201ENST00000224237 OGDHQ02218 1023 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 PDE4CQ08493 712 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 PPP2R5EQ16537 467 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 TCTN1Q2MV58 587 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 FAM102AQ5T9C2 384 aaPredicted RBP19.12■□□□□ 0.65
VIM-201ENST00000224237 TMCO3Q6UWJ1 677 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 TMEM110Q86TL2 294 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 SLC2A14Q8TDB8 520 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 SCLYQ96I15 445 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 LPIN3Q9BQK8 851 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 TMEM161AQ9NX61 479 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 TANC1Q9C0D5 1861 aa19.12■□□□□ 0.65
VIM-201ENST00000224237 PTPN1P18031 435 aaKnown RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 PSMA2P25787 234 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 TLE2Q04725 743 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 TIGD5Q53EQ6 642 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 DAB2IPQ5VWQ8 1189 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 AADACL2Q6P093 401 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 ZDHHC17Q8IUH5 632 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 JOSD2Q8TAC2 188 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 HNRNPLLQ8WVV9 542 aaKnown RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 SEPT8Q92599 483 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 HNRNPABQ99729 332 aaKnown RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 PPP1R12CQ9BZL4 782 aa19.11■□□□□ 0.65
VIM-201ENST00000224237 ELAC1Q9H777 363 aaKnown RBP19.11■□□□□ 0.65
VIM-201ENST00000224237 CYLDQ9NQC7 956 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms