RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G UBC4P15731 148 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G ERV15P38312 142 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G RTC3P38804 111 aaPredicted RBP1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G SPI1P40092 148 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G HUA1P40325 198 aa1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G CWC23P52868 283 aaPredicted RBP1.79□□□□□ -2.12
tC(GCA)GtC(GCA)G YPR010C-AA5Z2X5 72 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G RPS25BP0C0T4 108 aaKnown RBP1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G ATR1P13090 542 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G YCR023CP25351 611 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G NNK1P36003 928 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G EGD2P38879 174 aaKnown RBP1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G PET100P38958 111 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G YAL064WP39711 94 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G BRP1P53194 125 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G YDR366CP87287 132 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G KEI1Q06346 221 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G RRT7Q07829 113 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G YLR125WQ12138 136 aa1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G RPS25AQ3E792 108 aaPredicted RBP1.78□□□□□ -2.12
tC(GCA)GtC(GCA)G RPS2P25443 254 aaKnown RBP1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G YKL162CP36052 402 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G YKL070WP36087 169 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G KEG1P43614 200 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G ERI1P62651 68 aaKnown RBP1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G VPS28Q02767 242 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G AIM34Q03673 198 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G SHH3Q04487 196 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G DXO1Q06349 442 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G GPN3Q06543 272 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G RBD2Q12270 262 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G YBR200W-AQ3E755 54 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G YPR053CQ6Q5F3 151 aa1.77□□□□□ -2.13
tC(GCA)GtC(GCA)G SEC22P22214 214 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G SEC66P33754 206 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G PAN3P36102 679 aaPredicted RBP1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G LAG1P38703 411 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G CIN5P40917 295 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G YGL185CP53100 379 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G ATG33Q06485 197 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G ARR3Q06598 404 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G YMR122W-AQ3E842 84 aa1.76□□□□□ -2.13
tC(GCA)GtC(GCA)G QCR2P07257 368 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G CPT1P17898 393 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G MRP17P28778 131 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G YMR141CP40211 102 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G SNL1P40548 159 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G MIC27P50945 234 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G SPC24Q04477 213 aa1.75□□□□□ -2.13
tC(GCA)GtC(GCA)G HTB2P02294 131 aa1.74□□□□□ -2.13
tC(GCA)GtC(GCA)G CPR4P25334 318 aa1.74□□□□□ -2.13
tC(GCA)GtC(GCA)G YHR122WP38829 231 aa1.74□□□□□ -2.13
tC(GCA)GtC(GCA)G YOR268CQ08734 132 aa1.74□□□□□ -2.13
tC(GCA)GtC(GCA)G TAF3Q12297 353 aa1.74□□□□□ -2.13
tC(GCA)GtC(GCA)G GCN3P14741 305 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G SEC59P20048 519 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G POG1P40473 351 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G PDR17P53844 350 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G YLR179CQ06252 201 aaKnown RBP1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G CTR3Q06686 241 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G PEX27Q08580 376 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G AIM45Q12480 344 aaKnown RBP1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G COA2Q3E823 68 aa1.73□□□□□ -2.13
tC(GCA)GtC(GCA)G YLR415CO13578 112 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-LR4P0C2I8 440 aaKnown RBP1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-DR6P0CX70 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-ER1P0CX71 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-LR2P0CX72 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-PLP0CX73 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-JR1P0CX74 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-LR3P0CX75 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-ML2P0CX76 440 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G UBC5P15732 148 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G YGR269WP40326 108 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G ARC15P40518 154 aaRIP-Chip data1.72□□□□□ -2.13not detected
tC(GCA)GtC(GCA)G CPR8P53728 308 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G BOR1P53838 576 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G GIM3P53900 129 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G PMP3P87284 55 aa1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-PR3Q6Q5H1 440 aaKnown RBP1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G TY1A-OLQ92392 440 aaKnown RBP1.72□□□□□ -2.13
tC(GCA)GtC(GCA)G ECM12O13529 151 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G HOT13P36078 116 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G YPC1P38298 316 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G ERG28P40030 148 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G RPS29AP41057 56 aaKnown RBP1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G SER2P42941 309 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G IGD1P43598 195 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G RAI1P53063 387 aaKnown RBP1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G FIT2Q08906 153 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G YCT1Q12235 531 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G PRR2Q12310 699 aa1.71□□□□□ -2.14
tC(GCA)GtC(GCA)G YDR157WA0A023PZE8 133 aa1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G MIX23P38162 196 aa1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G SWM2P40342 146 aa1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G FMP33P46998 180 aa1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G YMR007WQ03675 126 aa1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G YMR090WQ04304 227 aaKnown RBP1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G NKP1Q12493 238 aa1.7□□□□□ -2.14
tC(GCA)GtC(GCA)G TPI1P00942 248 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms