RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YLR302CO13544 120 aa2.38□□□□□ -2.03
snR42snR42 CKS1P20486 150 aaKnown RBP2.38□□□□□ -2.03
snR42snR42 YCR025CP25352 136 aa2.38□□□□□ -2.03
snR42snR42 CDC50P25656 391 aa2.38□□□□□ -2.03
snR42snR42 LSM2P38203 95 aaKnown RBP2.38□□□□□ -2.03
snR42snR42 PET100P38958 111 aa2.38□□□□□ -2.03
snR42snR42 YER135CP40082 130 aa2.38□□□□□ -2.03
snR42snR42 YGR269WP40326 108 aa2.38□□□□□ -2.03
snR42snR42 SAS2P40963 338 aa2.38□□□□□ -2.03
snR42snR42 LCB3P47013 409 aa2.38□□□□□ -2.03
snR42snR42 JAC1P53193 184 aa2.38□□□□□ -2.03
snR42snR42 YGR025WP53216 100 aa2.38□□□□□ -2.03
snR42snR42 YNR066CP53752 436 aa2.38□□□□□ -2.03
snR42snR42 IZH1Q03419 316 aa2.38□□□□□ -2.03
snR42snR42 ATC1Q04005 294 aa2.38□□□□□ -2.03
snR42snR42 YDL242WQ07746 117 aa2.38□□□□□ -2.03
snR42snR42 YOL160WQ08321 113 aa2.38□□□□□ -2.03
snR42snR42 ERG27Q12452 347 aaKnown RBP2.38□□□□□ -2.03
snR42snR42 RPB3P16370 318 aaKnown RBP2.37□□□□□ -2.03
snR42snR42 QCR9P22289 66 aa2.37□□□□□ -2.03
snR42snR42 HSP12P22943 109 aaKnown RBP2.37□□□□□ -2.03
snR42snR42 YBL059WP34224 193 aa2.37□□□□□ -2.03
snR42snR42 MIG3P39943 394 aa2.37□□□□□ -2.03
snR42snR42 PRE5P40302 234 aaKnown RBP2.37□□□□□ -2.03
snR42snR42 TAD2P47058 250 aa2.37□□□□□ -2.03
snR42snR42 HAL1Q01766 294 aa2.37□□□□□ -2.03
snR42snR42 MRPS17Q03246 237 aaPredicted RBP2.37□□□□□ -2.03
snR42snR42 MRPS8Q03799 155 aa2.37□□□□□ -2.03
snR42snR42 YMR244WQ04018 355 aa2.37□□□□□ -2.03
snR42snR42 ANT1Q06497 328 aa2.37□□□□□ -2.03
snR42snR42 LOA1Q06508 300 aa2.37□□□□□ -2.03
snR42snR42 ERV2Q12284 196 aa2.37□□□□□ -2.03
snR42snR42 YPR145C-AQ2V2P0 78 aa2.37□□□□□ -2.03
snR42snR42 YGL194C-AQ2V2P6 80 aa2.37□□□□□ -2.03
snR42snR42 YNL146C-AQ3E7Z1 64 aa2.37□□□□□ -2.03
snR42snR42 UBI4P0CG63 381 aaKnown RBP2.36□□□□□ -2.03
snR42snR42 DDI2P0CH63 225 aa2.36□□□□□ -2.03
snR42snR42 DDI3P0CH64 225 aa2.36□□□□□ -2.03
snR42snR42 YCR001WP25347 104 aa2.36□□□□□ -2.03
snR42snR42 ACP1P32463 125 aa2.36□□□□□ -2.03
snR42snR42 EMP24P32803 203 aaKnown RBP2.36□□□□□ -2.03
snR42snR42 SDH8P38345 138 aa2.36□□□□□ -2.03
snR42snR42 YBR292CP38357 123 aa2.36□□□□□ -2.03
snR42snR42 VMA22P38784 181 aa2.36□□□□□ -2.03
snR42snR42 ASP1P38986 381 aaPredicted RBP2.36□□□□□ -2.03
snR42snR42 MBB1P39534 108 aa2.36□□□□□ -2.03
snR42snR42 GLE2P40066 365 aa2.36□□□□□ -2.03
snR42snR42 EMC5P40540 141 aa2.36□□□□□ -2.03
snR42snR42 YFR035CP43608 114 aa2.36□□□□□ -2.03
snR42snR42 IMP2P46972 177 aa2.36□□□□□ -2.03
snR42snR42 DSK2P48510 373 aa2.36□□□□□ -2.03
snR42snR42 MRPL50P53724 139 aa2.36□□□□□ -2.03
snR42snR42 CAF40P53829 373 aa2.36□□□□□ -2.03
snR42snR42 SGF11Q03067 99 aa2.36□□□□□ -2.03
snR42snR42 AVO2Q04749 426 aa2.36□□□□□ -2.03
snR42snR42 YPR063CQ12160 140 aa2.36□□□□□ -2.03
snR42snR42 YOR015WQ12169 119 aa2.36□□□□□ -2.03
snR42snR42 YDR157WA0A023PZE8 133 aa2.35□□□□□ -2.03
snR42snR42 RPL2AP0CX45 254 aaKnown RBP2.35□□□□□ -2.03
snR42snR42 RPL2BP0CX46 254 aaKnown RBP2.35□□□□□ -2.03
snR42snR42 RPS11AP0CX47 156 aaKnown RBP2.35□□□□□ -2.03
snR42snR42 RPS11BP0CX48 156 aaKnown RBP2.35□□□□□ -2.03
snR42snR42 AHT1P29589 182 aa2.35□□□□□ -2.03
snR42snR42 GCV3P39726 170 aaPredicted RBP2.35□□□□□ -2.03
snR42snR42 HUA1P40325 198 aa2.35□□□□□ -2.03
snR42snR42 SNX4P47057 423 aa2.35□□□□□ -2.03
snR42snR42 AIM24P47127 394 aa2.35□□□□□ -2.03
snR42snR42 RIB4P50861 169 aaPredicted RBP2.35□□□□□ -2.03
snR42snR42 MRX11Q03079 207 aa2.35□□□□□ -2.03
snR42snR42 ADD37Q03233 198 aa2.35□□□□□ -2.03
snR42snR42 PLP1Q04004 230 aa2.35□□□□□ -2.03
snR42snR42 SME1Q12330 94 aaPredicted RBP2.35□□□□□ -2.03
snR42snR42 YCR075W-AQ3E830 75 aa2.35□□□□□ -2.03
snR42snR42 YBR126W-AQ8TGU7 68 aa2.35□□□□□ -2.03
snR42snR42 HTB2P02294 131 aa2.34□□□□□ -2.03
snR42snR42 MRP2P10663 115 aaPredicted RBP2.34□□□□□ -2.03
snR42snR42 HMX1P32339 317 aa2.34□□□□□ -2.03
snR42snR42 ELF1P36053 145 aa2.34□□□□□ -2.03
snR42snR42 RPL14AP36105 138 aaKnown RBP2.34□□□□□ -2.03
snR42snR42 TRS20P38334 175 aa2.34□□□□□ -2.03
snR42snR42 RPL14BP38754 138 aaKnown RBP2.34□□□□□ -2.03
snR42snR42 TOM7P53507 60 aa2.34□□□□□ -2.03
snR42snR42 FMP41P53889 259 aaKnown RBP2.34□□□□□ -2.03
snR42snR42 FIT2Q08906 153 aa2.34□□□□□ -2.03
snR42snR42 YOL085CQ99345 113 aa2.34□□□□□ -2.03
snR42snR42 MRS1P07266 363 aa2.33□□□□□ -2.04
snR42snR42 RPL31BP0C2H9 113 aaKnown RBP2.33□□□□□ -2.04
snR42snR42 MRPL20P22354 195 aaPredicted RBP2.33□□□□□ -2.04
snR42snR42 RPS0AP32905 252 aaKnown RBP2.33□□□□□ -2.04
snR42snR42 RIB5P38145 238 aa2.33□□□□□ -2.04
snR42snR42 YPT10P38146 199 aa2.33□□□□□ -2.04
snR42snR42 YHR022CP38763 256 aa2.33□□□□□ -2.04
snR42snR42 SMD3P43321 101 aaKnown RBP2.33□□□□□ -2.04
snR42snR42 KEG1P43614 200 aa2.33□□□□□ -2.04
snR42snR42 YCL001W-AP87012 153 aa2.33□□□□□ -2.04
snR42snR42 TMA23Q03525 211 aa2.33□□□□□ -2.04
snR42snR42 SDO1Q07953 250 aaKnown RBP2.33□□□□□ -2.04
snR42snR42 VAM10Q08474 114 aa2.33□□□□□ -2.04
snR42snR42 ATX2Q12067 313 aa2.33□□□□□ -2.04
snR42snR42 YER175W-AQ8TGU4 54 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms