RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 PRE1P22141 198 aaKnown RBP1.51□□□□□ -2.17
snR35snR35 HSP12P22943 109 aaKnown RBP1.51□□□□□ -2.17
snR35snR35 SHB17P36136 271 aaKnown RBP1.51□□□□□ -2.17
snR35snR35 APS3P47064 194 aa1.51□□□□□ -2.17
snR35snR35 RCF2P53721 224 aa1.51□□□□□ -2.17
snR35snR35 YDR366CP87287 132 aa1.51□□□□□ -2.17
snR35snR35 YMR320WQ04897 101 aa1.51□□□□□ -2.17
snR35snR35 SCS22Q6Q595 175 aa1.51□□□□□ -2.17
snR35snR35 DUR1,2P32528 1835 aaKnown RBP1.51□□□□□ -2.17
snR35snR35 VMA10P48836 114 aaKnown RBP1.5□□□□□ -2.17
snR35snR35 EST3Q03096 181 aa1.5□□□□□ -2.17
snR35snR35 YMR007WQ03675 126 aa1.5□□□□□ -2.17
snR35snR35 FIT1Q04433 528 aa1.5□□□□□ -2.17
snR35snR35 AVO2Q04749 426 aa1.5□□□□□ -2.17
snR35snR35 KEI1Q06346 221 aa1.5□□□□□ -2.17
snR35snR35 TAF2P23255 1407 aa1.49□□□□□ -2.17
snR35snR35 KIN28P06242 306 aa1.49□□□□□ -2.17
snR35snR35 YGL041W-AP0C5N3 154 aa1.49□□□□□ -2.17
snR35snR35 GPI2P46961 280 aa1.49□□□□□ -2.17
snR35snR35 IRC19Q07843 230 aa1.49□□□□□ -2.17
snR35snR35 YKR070WP36151 352 aaKnown RBP1.48□□□□□ -2.17
snR35snR35 ECM31P38122 312 aa1.48□□□□□ -2.17
snR35snR35 YGR201CP42936 225 aa1.48□□□□□ -2.17
snR35snR35 YGR039WP53225 103 aa1.48□□□□□ -2.17
snR35snR35 COF1Q03048 143 aaKnown RBP1.48□□□□□ -2.17
snR35snR35 YEL014CP39999 101 aa1.47□□□□□ -2.17
snR35snR35 DCV1P43595 202 aa1.47□□□□□ -2.17
snR35snR35 HHO1P53551 258 aa1.47□□□□□ -2.17
snR35snR35 SUI1P32911 108 aaKnown RBP1.46□□□□□ -2.18
snR35snR35 CSN9Q03981 162 aa1.46□□□□□ -2.18
snR35snR35 CMC4Q3E7A9 73 aa1.46□□□□□ -2.18
snR35snR35 YHL037CP38733 133 aa1.45□□□□□ -2.18
snR35snR35 YFL051CP43552 160 aa1.45□□□□□ -2.18
snR35snR35 HYP2P23301 157 aaKnown RBP1.44□□□□□ -2.18
snR35snR35 IPT1P38954 527 aa1.44□□□□□ -2.18
snR35snR35 YPR153WQ06537 140 aa1.44□□□□□ -2.18
snR35snR35 VAM10Q08474 114 aa1.44□□□□□ -2.18
snR35snR35 HSP150P32478 413 aa1.43□□□□□ -2.18
snR35snR35 PHB1P40961 287 aa1.43□□□□□ -2.18
snR35snR35 LSM8P47093 109 aaKnown RBP1.43□□□□□ -2.18
snR35snR35 SPG1P50088 95 aa1.43□□□□□ -2.18
snR35snR35 YCL001W-AP87012 153 aa1.43□□□□□ -2.18
snR35snR35 GPI11Q06636 219 aa1.43□□□□□ -2.18
snR35snR35 FCY1Q12178 158 aa1.43□□□□□ -2.18
snR35snR35 COX5BP00425 151 aa1.42□□□□□ -2.18
snR35snR35 NHP6AP11632 93 aaKnown RBP1.42□□□□□ -2.18
snR35snR35 ATG8P38182 117 aaRIP-Chip data1.42□□□□□ -2.18not detected
snR35snR35 YBR027CP38220 110 aa1.42□□□□□ -2.18
snR35snR35 DIE2P50076 525 aa1.42□□□□□ -2.18
snR35snR35 SPC3Q12133 184 aa1.42□□□□□ -2.18
snR35snR35 ATP14Q12349 124 aa1.42□□□□□ -2.18
snR35snR35 RPS1BP23248 255 aaKnown RBP1.41□□□□□ -2.18
snR35snR35 FYV5P25585 152 aa1.41□□□□□ -2.18
snR35snR35 ACP1P32463 125 aa1.41□□□□□ -2.18
snR35snR35 CYC2P38909 366 aa1.41□□□□□ -2.18
snR35snR35 YGR042WP53227 271 aa1.41□□□□□ -2.18
snR35snR35 YNL019CP53975 284 aa1.41□□□□□ -2.18
snR35snR35 LCL2Q08045 131 aa1.41□□□□□ -2.18
snR35snR35 HUT1Q12520 339 aa1.41□□□□□ -2.18
snR35snR35 MHF1Q3E835 90 aa1.41□□□□□ -2.18
snR35snR35 RIB3Q99258 208 aa1.41□□□□□ -2.18
snR35snR35 YHR140WP38842 239 aa1.4□□□□□ -2.19
snR35snR35 YAR064WP39563 99 aa1.4□□□□□ -2.19
snR35snR35 GIM4P40005 111 aaKnown RBP1.4□□□□□ -2.19
snR35snR35 CCW12Q12127 133 aa1.4□□□□□ -2.19
snR35snR35 RIF1P29539 1916 aa1.39□□□□□ -2.19
snR35snR35 HUA1P40325 198 aa1.39□□□□□ -2.19
snR35snR35 YIL102CP40488 101 aa1.39□□□□□ -2.19
snR35snR35 EMC4P53073 190 aa1.39□□□□□ -2.19
snR35snR35 YGL204CP53089 101 aa1.39□□□□□ -2.19
snR35snR35 YGR017WP53210 297 aa1.39□□□□□ -2.19
snR35snR35 SPC2Q04969 178 aa1.39□□□□□ -2.19
snR35snR35 SOM1Q05676 74 aa1.39□□□□□ -2.19
snR35snR35 RAF1Q06891 181 aa1.39□□□□□ -2.19
snR35snR35 SUA7P29055 345 aaPredicted RBP1.38□□□□□ -2.19
snR35snR35 RPL14AP36105 138 aaKnown RBP1.38□□□□□ -2.19
snR35snR35 POP7P38291 140 aa1.38□□□□□ -2.19
snR35snR35 RPL14BP38754 138 aaKnown RBP1.38□□□□□ -2.19
snR35snR35 ELC1Q03071 99 aa1.38□□□□□ -2.19
snR35snR35 SEN15Q04675 128 aa1.38□□□□□ -2.19
snR35snR35 DDP1Q99321 188 aaKnown RBP1.38□□□□□ -2.19
snR35snR35 RPS1AP33442 255 aaKnown RBP1.37□□□□□ -2.19
snR35snR35 HPM1P40481 377 aa1.37□□□□□ -2.19
snR35snR35 SED1Q01589 338 aa1.37□□□□□ -2.19
snR35snR35 TMA23Q03525 211 aa1.37□□□□□ -2.19
snR35snR35 NAT5Q08689 176 aa1.37□□□□□ -2.19
snR35snR35 YOR385WQ08909 290 aa1.37□□□□□ -2.19
snR35snR35 UBR1P19812 1950 aa1.37□□□□□ -2.19
snR35snR35 RPL33AP05744 107 aaKnown RBP1.36□□□□□ -2.19
snR35snR35 MRPL44P19956 98 aa1.36□□□□□ -2.19
snR35snR35 CNL1Q06333 122 aa1.36□□□□□ -2.19
snR35snR35 FMP49A0A023PZB3 126 aa1.35□□□□□ -2.19
snR35snR35 YCR050CP25630 102 aa1.35□□□□□ -2.19
snR35snR35 RPL37AP49166 88 aaKnown RBP1.35□□□□□ -2.19
snR35snR35 YLR361C-AQ3E795 98 aa1.35□□□□□ -2.19
snR35snR35 HYM1P32464 399 aa1.34□□□□□ -2.19
snR35snR35 UGX2P32772 223 aa1.34□□□□□ -2.19
snR35snR35 SFT2P38166 215 aa1.34□□□□□ -2.19
snR35snR35 YGL149WP53116 101 aa1.34□□□□□ -2.19
snR35snR35 YPL067CQ02754 198 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms