RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W TTI2P47168 421 aa1.19□□□□□ -2.22
CTF4YPR135W RSM27P53305 110 aa1.19□□□□□ -2.22
CTF4YPR135W MAK3Q03503 176 aa1.19□□□□□ -2.22
CTF4YPR135W TVP15Q03860 143 aa1.19□□□□□ -2.22
CTF4YPR135W NAT3Q06504 195 aa1.19□□□□□ -2.22
CTF4YPR135W DGK1Q12382 290 aa1.19□□□□□ -2.22
CTF4YPR135W RPL39P04650 51 aa1.19□□□□□ -2.22
CTF4YPR135W OCH1P31755 480 aa1.19□□□□□ -2.22
CTF4YPR135W RPS1AP33442 255 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W RFC2P40348 353 aa1.19□□□□□ -2.22
CTF4YPR135W HYR1P40581 163 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W CIN5P40917 295 aa1.19□□□□□ -2.22
CTF4YPR135W YFL019CP43576 117 aa1.19□□□□□ -2.22
CTF4YPR135W MIC19P43594 170 aa1.19□□□□□ -2.22
CTF4YPR135W YGL088WP53151 121 aa1.19□□□□□ -2.22
CTF4YPR135W YDR476CQ03362 224 aa1.19□□□□□ -2.22
CTF4YPR135W FCF1Q05498 189 aaPredicted RBP1.19□□□□□ -2.22
CTF4YPR135W YPL264CQ08980 353 aa1.19□□□□□ -2.22
CTF4YPR135W PST2Q12335 198 aaKnown RBP1.19□□□□□ -2.22
CTF4YPR135W TSC3Q3E790 80 aa1.19□□□□□ -2.22
CTF4YPR135W YPR096CO13587 100 aa1.18□□□□□ -2.22
CTF4YPR135W UGX2P32772 223 aa1.18□□□□□ -2.22
CTF4YPR135W AIM2P39721 246 aa1.18□□□□□ -2.22
CTF4YPR135W VTC1P40046 129 aaRIP-Chip data1.18□□□□□ -2.22not detected
CTF4YPR135W CAX4P53223 239 aa1.18□□□□□ -2.22
CTF4YPR135W UBC7Q02159 165 aa1.18□□□□□ -2.22
CTF4YPR135W YHR212W-AP0CX91 67 aa1.18□□□□□ -2.22
CTF4YPR135W SPT14P32363 452 aa1.18□□□□□ -2.22
CTF4YPR135W MRPS9P38120 278 aa1.18□□□□□ -2.22
CTF4YPR135W POP4P38336 279 aa1.18□□□□□ -2.22
CTF4YPR135W FYV4P38783 130 aaPredicted RBP1.18□□□□□ -2.22
CTF4YPR135W YGR219WP53307 113 aa1.18□□□□□ -2.22
CTF4YPR135W NEJ1Q06148 342 aa1.18□□□□□ -2.22
CTF4YPR135W YPD1Q07688 167 aa1.18□□□□□ -2.22
CTF4YPR135W YOR020W-AQ3E824 90 aa1.18□□□□□ -2.22
CTF4YPR135W NHP6AP11632 93 aaKnown RBP1.17□□□□□ -2.22
CTF4YPR135W RCN1P36054 211 aa1.17□□□□□ -2.22
CTF4YPR135W YHR180WP38868 163 aa1.17□□□□□ -2.22
CTF4YPR135W SER2P42941 309 aa1.17□□□□□ -2.22
CTF4YPR135W YFR035CP43608 114 aa1.17□□□□□ -2.22
CTF4YPR135W TDA4P47153 279 aa1.17□□□□□ -2.22
CTF4YPR135W SMD1Q02260 146 aaPredicted RBP1.17□□□□□ -2.22
CTF4YPR135W MRPS16Q02608 121 aa1.17□□□□□ -2.22
CTF4YPR135W PLP1Q04004 230 aa1.17□□□□□ -2.22
CTF4YPR135W YDR391CQ04170 232 aa1.17□□□□□ -2.22
CTF4YPR135W ATG39Q06159 398 aa1.17□□□□□ -2.22
CTF4YPR135W YOL014WQ08110 124 aa1.17□□□□□ -2.22
CTF4YPR135W FYV12Q08559 129 aa1.17□□□□□ -2.22
CTF4YPR135W YML100W-AQ8TGT0 57 aa1.17□□□□□ -2.22
CTF4YPR135W RPL9AP05738 191 aaKnown RBP1.17□□□□□ -2.22
CTF4YPR135W BET1P22804 142 aa1.17□□□□□ -2.22
CTF4YPR135W RNP1P32385 249 aa1.17□□□□□ -2.22
CTF4YPR135W UTR5P32630 166 aa1.17□□□□□ -2.22
CTF4YPR135W YPL073CP40323 161 aa1.17□□□□□ -2.22
CTF4YPR135W YJL218WP40892 196 aaKnown RBP1.17□□□□□ -2.22
CTF4YPR135W PFS2P42841 465 aaKnown RBP1.17□□□□□ -2.22
CTF4YPR135W RPL9BP51401 191 aaKnown RBP1.17□□□□□ -2.22
CTF4YPR135W HAL1Q01766 294 aa1.17□□□□□ -2.22
CTF4YPR135W YMD8Q03697 442 aa1.17□□□□□ -2.22
CTF4YPR135W RAV2Q03956 351 aa1.17□□□□□ -2.22
CTF4YPR135W IRC19Q07843 230 aa1.17□□□□□ -2.22
CTF4YPR135W YOR268CQ08734 132 aa1.17□□□□□ -2.22
CTF4YPR135W YMR030W-AQ3E760 96 aa1.17□□□□□ -2.22
CTF4YPR135W RPS1BP23248 255 aaKnown RBP1.16□□□□□ -2.22
CTF4YPR135W ROX3P25046 220 aa1.16□□□□□ -2.22
CTF4YPR135W LHP1P33399 275 aaKnown RBP1.16□□□□□ -2.22
CTF4YPR135W MID2P36027 376 aa1.16□□□□□ -2.22
CTF4YPR135W PRE5P40302 234 aaKnown RBP1.16□□□□□ -2.22
CTF4YPR135W DLS1P40366 167 aa1.16□□□□□ -2.22
CTF4YPR135W ISD11Q6Q560 94 aa1.16□□□□□ -2.22
CTF4YPR135W ADK1P07170 222 aaKnown RBP1.16□□□□□ -2.22
CTF4YPR135W HYM1P32464 399 aa1.16□□□□□ -2.22
CTF4YPR135W CCC1P47818 322 aa1.16□□□□□ -2.22
CTF4YPR135W SLM2P53955 656 aa1.16□□□□□ -2.22
CTF4YPR135W COF1Q03048 143 aaKnown RBP1.16□□□□□ -2.22
CTF4YPR135W MET31Q03081 177 aa1.16□□□□□ -2.22
CTF4YPR135W YML108WQ03759 105 aa1.16□□□□□ -2.22
CTF4YPR135W YOR214CQ12282 236 aa1.16□□□□□ -2.22
CTF4YPR135W YOR343CQ12484 108 aa1.16□□□□□ -2.22
CTF4YPR135W CDC8P00572 216 aa1.15□□□□□ -2.22
CTF4YPR135W YHR032W-AP0C5N6 59 aa1.15□□□□□ -2.22
CTF4YPR135W URA5P13298 226 aaKnown RBP1.15□□□□□ -2.22
CTF4YPR135W HSP30P25619 332 aa1.15□□□□□ -2.22
CTF4YPR135W MRPL17P36528 281 aa1.15□□□□□ -2.22
CTF4YPR135W COS8P38723 381 aa1.15□□□□□ -2.22
CTF4YPR135W YHR125WP38831 101 aa1.15□□□□□ -2.22
CTF4YPR135W YAR068WP39564 161 aa1.15□□□□□ -2.22
CTF4YPR135W YER181CP40097 107 aa1.15□□□□□ -2.22
CTF4YPR135W HPM1P40481 377 aa1.15□□□□□ -2.22
CTF4YPR135W MPC3P53311 146 aa1.15□□□□□ -2.22
CTF4YPR135W HHT1P61830 136 aa1.15□□□□□ -2.22
CTF4YPR135W YDR274CP87283 123 aa1.15□□□□□ -2.22
CTF4YPR135W RUB1Q03919 77 aa1.15□□□□□ -2.22
CTF4YPR135W FRQ1Q06389 190 aa1.15□□□□□ -2.22
CTF4YPR135W YPR014CQ6B0W2 109 aa1.15□□□□□ -2.22
CTF4YPR135W YAR023CD6VPM8 179 aa1.15□□□□□ -2.23
CTF4YPR135W ATP5P09457 212 aa1.15□□□□□ -2.23
CTF4YPR135W PBI2P0CT04 75 aaKnown RBP1.15□□□□□ -2.23
CTF4YPR135W GPA2P10823 449 aa1.15□□□□□ -2.23
CTF4YPR135W PTC1P35182 281 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms