RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	AQY2	P0CD90	149 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	AHT1	P29589	182 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	SHB17	P36136	271 aa	Known RBP	0.86	□□□□□ -2.27
RLM1	YPL089C	GIM4	P40005	111 aa	Known RBP	0.86	□□□□□ -2.27
RLM1	YPL089C	YGL204C	P53089	101 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	YGR039W	P53225	103 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	HHO1	P53551	258 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	RCF2	P53721	224 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	FMN1	Q03778	218 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	IRC19	Q07843	230 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	SCS22	Q6Q595	175 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	ACC1	Q00955	2233 aa	Known RBP	0.86	□□□□□ -2.27
RLM1	YPL089C	SPA2	P23201	1466 aa	Known RBP	0.85	□□□□□ -2.27
RLM1	YPL089C	YBR242W	P38331	238 aa		0.85	□□□□□ -2.27
RLM1	YPL089C	YGR042W	P53227	271 aa		0.85	□□□□□ -2.27
RLM1	YPL089C	ATP19	P81451	68 aa		0.85	□□□□□ -2.27
RLM1	YPL089C	NMA1	Q06178	401 aa	Known RBP	0.85	□□□□□ -2.27
RLM1	YPL089C	CMC4	Q3E7A9	73 aa		0.85	□□□□□ -2.27
RLM1	YPL089C	RPC19	P28000	142 aa	Known RBP	0.84	□□□□□ -2.27
RLM1	YPL089C	POP7	P38291	140 aa		0.84	□□□□□ -2.27
RLM1	YPL089C	YEL014C	P39999	101 aa		0.84	□□□□□ -2.27
RLM1	YPL089C	KEI1	Q06346	221 aa		0.84	□□□□□ -2.27
RLM1	YPL089C	SPC3	Q12133	184 aa		0.84	□□□□□ -2.27
RLM1	YPL089C	UBR2	Q07963	1872 aa		0.84	□□□□□ -2.27
RLM1	YPL089C	YGL041W-A	P0C5N3	154 aa		0.84	□□□□□ -2.28
RLM1	YPL089C	YHR212W-A	P0CX91	67 aa		0.84	□□□□□ -2.28
RLM1	YPL089C	HSP150	P32478	413 aa		0.84	□□□□□ -2.28
RLM1	YPL089C	SUI1	P32911	108 aa	Known RBP	0.84	□□□□□ -2.28
RLM1	YPL089C	YHR140W	P38842	239 aa		0.84	□□□□□ -2.28
RLM1	YPL089C	YLR361C-A	Q3E795	98 aa		0.84	□□□□□ -2.28
RLM1	YPL089C	MRPL15	P36523	253 aa		0.83	□□□□□ -2.28
RLM1	YPL089C	PHB1	P40961	287 aa		0.83	□□□□□ -2.28
RLM1	YPL089C	GLC8	P41818	229 aa		0.83	□□□□□ -2.28
RLM1	YPL089C	YPR203W	Q08994	102 aa		0.83	□□□□□ -2.28
RLM1	YPL089C	PRE1	P22141	198 aa	Known RBP	0.82	□□□□□ -2.28
RLM1	YPL089C	SUA7	P29055	345 aa	Predicted RBP	0.82	□□□□□ -2.28
RLM1	YPL089C	YGL230C	P53074	147 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	YCL001W-A	P87012	153 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	FIT1	Q04433	528 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	YDR278C	Q05612	105 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	TAF2	P23255	1407 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	VAR1	P02381	398 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	PRS3	P38689	320 aa	Known RBP	0.82	□□□□□ -2.28
RLM1	YPL089C	YHL037C	P38733	133 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	IPT1	P38954	527 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	DIE2	P50076	525 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	YNL019C	P53975	284 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	YPR153W	Q06537	140 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	FCY1	Q12178	158 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	UBR1	P19812	1950 aa		0.82	□□□□□ -2.28
RLM1	YPL089C	COX5B	P00425	151 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	RPS1B	P23248	255 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	TRS20	P38334	175 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	RPS20	P38701	121 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	HPM1	P40481	377 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	LSM8	P47093	109 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	SPG1	P50088	95 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	EMC4	P53073	190 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	TIM8	P57744	87 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	GPI11	Q06636	219 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	YOR385W	Q08909	290 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	YNL277W-A	Q3E7Z0	62 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	KIN28	P06242	306 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	FYV5	P25585	152 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	RPL14A	P36105	138 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	YKR070W	P36151	352 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	ECM31	P38122	312 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	YBR027C	P38220	110 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	RPL14B	P38754	138 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	YFL051C	P43552	160 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	VMA10	P48836	114 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	SOM1	Q05676	74 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	ATP14	Q12349	124 aa		0.81	□□□□□ -2.28
RLM1	YPL089C	DDP1	Q99321	188 aa	Known RBP	0.81	□□□□□ -2.28
RLM1	YPL089C	NHP6A	P11632	93 aa	Known RBP	0.8	□□□□□ -2.28
RLM1	YPL089C	RPS1A	P33442	255 aa	Known RBP	0.8	□□□□□ -2.28
RLM1	YPL089C	APS3	P47064	194 aa		0.8	□□□□□ -2.28
RLM1	YPL089C	DYN2	Q02647	92 aa		0.8	□□□□□ -2.28
RLM1	YPL089C	RAF1	Q06891	181 aa		0.8	□□□□□ -2.28
RLM1	YPL089C	HUT1	Q12520	339 aa		0.8	□□□□□ -2.28
RLM1	YPL089C	DNA2	P38859	1522 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	RAD50	P12753	1312 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	FMP49	A0A023PZB3	126 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	YCR050C	P25630	102 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	TVP18	Q04767	167 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	HYP2	P23301	157 aa	Known RBP	0.79	□□□□□ -2.28
RLM1	YPL089C	DCV1	P43595	202 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	YGR017W	P53210	297 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	ELC1	Q03071	99 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	TMA23	Q03525	211 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	CNL1	Q06333	122 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	VAM10	Q08474	114 aa		0.79	□□□□□ -2.28
RLM1	YPL089C	CDC39	P25655	2108 aa	Known RBP	0.79	□□□□□ -2.28
RLM1	YPL089C	HYM1	P32464	399 aa		0.78	□□□□□ -2.28
RLM1	YPL089C	ATG8	P38182	117 aa	RIP-Chip data	0.78	□□□□□ -2.28	not detected
RLM1	YPL089C	YAL064W	P39711	94 aa		0.78	□□□□□ -2.28
RLM1	YPL089C	PHS1	P40857	217 aa		0.78	□□□□□ -2.28
RLM1	YPL089C	SFT1	P43682	97 aa		0.78	□□□□□ -2.28
RLM1	YPL089C	NKP2	Q06162	153 aa		0.78	□□□□□ -2.28
RLM1	YPL089C	NAT5	Q08689	176 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms