RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUP1	YOR138C	FZF1	P32805	299 aa		6.13	□□□□□ -1.43
RUP1	YOR138C	UME6	P39001	836 aa		6.13	□□□□□ -1.43
RUP1	YOR138C	HAC1	P41546	238 aa		6.13	□□□□□ -1.43
RUP1	YOR138C	YGL118C	P53132	145 aa		6.13	□□□□□ -1.43
RUP1	YOR138C	RPL23A	P0CX41	137 aa	Known RBP	6.13	□□□□□ -1.43
RUP1	YOR138C	RPL23B	P0CX42	137 aa	Known RBP	6.13	□□□□□ -1.43
RUP1	YOR138C	YBL071C	P38185	102 aa		6.13	□□□□□ -1.43
RUP1	YOR138C	LSM2	P38203	95 aa	Known RBP	6.13	□□□□□ -1.43
RUP1	YOR138C	DOG2	P38773	246 aa		6.13	□□□□□ -1.43
RUP1	YOR138C	THG1	P53215	237 aa	Known RBP	6.13	□□□□□ -1.43
RUP1	YOR138C	ARC18	Q05933	178 aa	Known RBP	6.13	□□□□□ -1.43
RUP1	YOR138C	FPR2	P32472	135 aa		6.12	□□□□□ -1.43
RUP1	YOR138C	YNL200C	P40165	246 aa	Known RBP	6.12	□□□□□ -1.43
RUP1	YOR138C	MSL1	P40567	111 aa	Predicted RBP	6.12	□□□□□ -1.43
RUP1	YOR138C	YGR151C	P53287	111 aa		6.12	□□□□□ -1.43
RUP1	YOR138C	CRZ1	P53968	678 aa		6.12	□□□□□ -1.43
RUP1	YOR138C	YPL162C	Q12042	273 aa		6.12	□□□□□ -1.43
RUP1	YOR138C	YDR215C	Q12240	137 aa		6.12	□□□□□ -1.43
RUP1	YOR138C	RPS23A	P0CX29	145 aa	Known RBP	6.11	□□□□□ -1.43
RUP1	YOR138C	RPS23B	P0CX30	145 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	ATP10	P18496	279 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	BDH1	P39714	382 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	YER188W	P40103	239 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	MIC26	P50087	233 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	YGL230C	P53074	147 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	YNR064C	P53750	290 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	GAT3	Q07928	141 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	FSF1	Q12029	327 aa	Known RBP	6.11	□□□□□ -1.43
RUP1	YOR138C	YMR105W-A	Q8TGS8	64 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	SEN1	Q00416	2231 aa	Known RBP	6.11	□□□□□ -1.43
RUP1	YOR138C	TIR1	P10863	254 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	SEC11	P15367	167 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	YCR022C	P25620	114 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	ELF1	P36053	145 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	SFT2	P38166	215 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	YFL054C	P43549	646 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	IRA2	P19158	3079 aa		6.11	□□□□□ -1.43
RUP1	YOR138C	ADE8	P04161	214 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	YPT10	P38146	199 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	ICS2	P38284	255 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	CSH1	P38287	376 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	LST8	P41318	303 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	YJL118W	P47022	219 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	YGR018C	P53211	109 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	MRX11	Q03079	207 aa		6.1	□□□□□ -1.43
RUP1	YOR138C	COX2	P00410	251 aa		6.09	□□□□□ -1.43
RUP1	YOR138C	MRPL31	P14063	131 aa	Predicted RBP	6.09	□□□□□ -1.43
RUP1	YOR138C	RPI1	P23250	407 aa	Known RBP	6.09	□□□□□ -1.43
RUP1	YOR138C	YCR007C	P25354	239 aa		6.09	□□□□□ -1.43
RUP1	YOR138C	LDB16	P25587	256 aa		6.09	□□□□□ -1.43
RUP1	YOR138C	YFL051C	P43552	160 aa		6.09	□□□□□ -1.43
RUP1	YOR138C	YFR045W	P43617	309 aa		6.09	□□□□□ -1.43
RUP1	YOR138C	MRS1	P07266	363 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	YBR220C	P38318	560 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	CTR2	P38865	189 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	POP3	P53833	195 aa	Predicted RBP	6.08	□□□□□ -1.44
RUP1	YOR138C	UPS3	Q04006	179 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	SOR1	P35497	357 aa	Known RBP	6.08	□□□□□ -1.44
RUP1	YOR138C	MOH1	P38191	138 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	RPF1	P38805	295 aa	Known RBP	6.08	□□□□□ -1.44
RUP1	YOR138C	PAU7	P39545	55 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	DAD4	P69851	72 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	SDH7	Q04401	133 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	DPP1	Q05521	289 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	SOR2	Q07786	357 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	AYT1	Q12226	474 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	ATO3	Q12359	275 aa		6.08	□□□□□ -1.44
RUP1	YOR138C	MTR2	P34232	184 aa	Known RBP	6.07	□□□□□ -1.44
RUP1	YOR138C	COX16	P47081	118 aa		6.07	□□□□□ -1.44
RUP1	YOR138C	BRP1	P53194	125 aa		6.07	□□□□□ -1.44
RUP1	YOR138C	RUB1	Q03919	77 aa		6.07	□□□□□ -1.44
RUP1	YOR138C	IRC25	Q07951	179 aa		6.07	□□□□□ -1.44
RUP1	YOR138C	TIM18	Q08749	192 aa		6.07	□□□□□ -1.44
RUP1	YOR138C	MDM10	P18409	493 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	FEN2	P25621	512 aa	Known RBP	6.06	□□□□□ -1.44
RUP1	YOR138C	TIR2	P33890	251 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	YMR141C	P40211	102 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	HST4	P53688	370 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	SWT21	P53873	357 aa	Predicted RBP	6.06	□□□□□ -1.44
RUP1	YOR138C	GRH1	Q04410	372 aa	Known RBP	6.06	□□□□□ -1.44
RUP1	YOR138C	HTB2	P02294	131 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	ALG14	P38242	237 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	GZF3	P42944	551 aa	Known RBP	6.06	□□□□□ -1.44
RUP1	YOR138C	YGR017W	P53210	297 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	SED1	Q01589	338 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	RXT3	Q07458	294 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	DAD1	Q12248	94 aa		6.06	□□□□□ -1.44
RUP1	YOR138C	YFL068W	P0CX99	160 aa		6.05	□□□□□ -1.44
RUP1	YOR138C	YLL066W-A	P0CY00	160 aa		6.05	□□□□□ -1.44
RUP1	YOR138C	YLL067W-A	P0CY01	160 aa		6.05	□□□□□ -1.44
RUP1	YOR138C	YKR070W	P36151	352 aa	Known RBP	6.05	□□□□□ -1.44
RUP1	YOR138C	YER121W	P40076	114 aa		6.05	□□□□□ -1.44
RUP1	YOR138C	YPI1	P43587	155 aa		6.05	□□□□□ -1.44
RUP1	YOR138C	YLR050C	Q12155	161 aa	Known RBP	6.05	□□□□□ -1.44
RUP1	YOR138C	YDL009C	Q12210	107 aa		6.05	□□□□□ -1.44
RUP1	YOR138C	ADH2	P00331	348 aa	Known RBP	6.04	□□□□□ -1.44
RUP1	YOR138C	YPR170W-B	P0C5R9	85 aa		6.04	□□□□□ -1.44
RUP1	YOR138C	PRE1	P22141	198 aa	Known RBP	6.04	□□□□□ -1.44
RUP1	YOR138C	GTO3	Q04806	366 aa		6.04	□□□□□ -1.44
RUP1	YOR138C	PIN2	Q12057	282 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms