RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	PAM17	P36147	197 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	YIR016W	P40572	265 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	BAT2	P47176	376 aa	Known RBP	6.05	□□□□□ -1.44
MSB3	YNL293W	HPF1	Q05164	967 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	YFH1	Q07540	174 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	NPC2	Q12408	173 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	COX5A	P00424	153 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	YCR025C	P25352	136 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	FUN19	P28003	413 aa	Predicted RBP	6.05	□□□□□ -1.44
MSB3	YNL293W	AHT1	P29589	182 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	SFT1	P43682	97 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	GPI2	P46961	280 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	YGL118C	P53132	145 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	YLR152C	P54072	576 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	RAF1	Q06891	181 aa		6.05	□□□□□ -1.44
MSB3	YNL293W	PBI2	P0CT04	75 aa	Known RBP	6.04	□□□□□ -1.44
MSB3	YNL293W	LYS1	P38998	373 aa	RIP-Chip data	6.04	□□□□□ -1.44	RIP-Chip
MSB3	YNL293W	YGR219W	P53307	113 aa		6.04	□□□□□ -1.44
MSB3	YNL293W	SWT21	P53873	357 aa	Predicted RBP	6.04	□□□□□ -1.44
MSB3	YNL293W	GEP3	Q08622	556 aa		6.04	□□□□□ -1.44
MSB3	YNL293W	COA2	Q3E823	68 aa		6.04	□□□□□ -1.44
MSB3	YNL293W	SOD1	P00445	154 aa	Known RBP	6.03	□□□□□ -1.44
MSB3	YNL293W	FMP46	P36141	133 aa	Known RBP	6.03	□□□□□ -1.44
MSB3	YNL293W	YBR184W	P38299	523 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	RPS26A	P39938	119 aa	Known RBP	6.03	□□□□□ -1.44
MSB3	YNL293W	RPS26B	P39939	119 aa	Known RBP	6.03	□□□□□ -1.44
MSB3	YNL293W	YNL195C	P40168	261 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	BXI1	P48558	297 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	HSK3	P69852	69 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	IES4	Q08561	116 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	DFM1	Q12743	341 aa	Known RBP	6.03	□□□□□ -1.44
MSB3	YNL293W	YNL277W-A	Q3E7Z0	62 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	YOL162W	P0CF19	215 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	MDM10	P18409	493 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	YCR050C	P25630	102 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	not detected
MSB3	YNL293W	AUR1	P36107	401 aa	Predicted RBP	6.03	□□□□□ -1.44
MSB3	YNL293W	MST28	P39552	234 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	not detected
MSB3	YNL293W	BRR6	P53062	197 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	PIR3	Q03180	325 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	ERF2	Q06551	359 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	YDL180W	Q12301	547 aa		6.03	□□□□□ -1.44
MSB3	YNL293W	PMD1	P32634	1753 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	TRP1	P00912	224 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	YPT10	P38146	199 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	MRX11	Q03079	207 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	GPI19	Q04082	140 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	AYT1	Q12226	474 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	DAD1	Q12248	94 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	SMT3	Q12306	101 aa	Known RBP	6.02	□□□□□ -1.45
MSB3	YNL293W	YCL021W-A	Q96VH3	125 aa		6.02	□□□□□ -1.45
MSB3	YNL293W	MTC7	P32633	139 aa		6.01	□□□□□ -1.45
MSB3	YNL293W	YBL059W	P34224	193 aa		6.01	□□□□□ -1.45
MSB3	YNL293W	DSK2	P48510	373 aa		6.01	□□□□□ -1.45
MSB3	YNL293W	TPC1	P53257	314 aa		6.01	□□□□□ -1.45
MSB3	YNL293W	POP3	P53833	195 aa	Predicted RBP	6.01	□□□□□ -1.45
MSB3	YNL293W	RPS22A	P0C0W1	130 aa	Known RBP	6.01	□□□□□ -1.45
MSB3	YNL293W	TOM40	P23644	387 aa	Known RBP	6.01	□□□□□ -1.45
MSB3	YNL293W	YOR292C	Q08743	309 aa		6.01	□□□□□ -1.45
MSB3	YNL293W	RPL2A	P0CX45	254 aa	Known RBP	6	□□□□□ -1.45
MSB3	YNL293W	RPL2B	P0CX46	254 aa	Known RBP	6	□□□□□ -1.45
MSB3	YNL293W	ECM34	P38728	170 aa		6	□□□□□ -1.45
MSB3	YNL293W	YGR164W	P53291	111 aa		6	□□□□□ -1.45
MSB3	YNL293W	MIX17	Q03667	156 aa		6	□□□□□ -1.45
MSB3	YNL293W	RFM1	Q12192	310 aa		6	□□□□□ -1.45
MSB3	YNL293W	MPD1	Q12404	318 aa	Known RBP	6	□□□□□ -1.45
MSB3	YNL293W	TOM6	P33448	61 aa		5.99	□□□□□ -1.45
MSB3	YNL293W	YER079W	P40052	210 aa	Known RBP	5.99	□□□□□ -1.45
MSB3	YNL293W	YNL200C	P40165	246 aa	Known RBP	5.99	□□□□□ -1.45
MSB3	YNL293W	MZM1	Q03429	123 aa	Predicted RBP	5.99	□□□□□ -1.45
MSB3	YNL293W	KSH1	Q8TGJ3	72 aa		5.99	□□□□□ -1.45
MSB3	YNL293W	YHL018W	P38744	120 aa	Predicted RBP	5.99	□□□□□ -1.45
MSB3	YNL293W	TDA4	P47153	279 aa		5.99	□□□□□ -1.45
MSB3	YNL293W	BRP1	P53194	125 aa		5.99	□□□□□ -1.45
MSB3	YNL293W	COX12	Q01519	83 aa		5.99	□□□□□ -1.45
MSB3	YNL293W	GSC2	P40989	1895 aa		5.99	□□□□□ -1.45
MSB3	YNL293W	YPS1	P32329	569 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	MRPS5	P33759	307 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	NRG2	P38082	220 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	DFG10	P40526	253 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	CRH1	P53301	507 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	SLG1	P54867	378 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	MSA1	Q08471	629 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	YBR126W-A	Q8TGU7	68 aa		5.98	□□□□□ -1.45
MSB3	YNL293W	YHL042W	P38729	150 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	PEX22	P39718	180 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	YER181C	P40097	107 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	HST4	P53688	370 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	YDR042C	Q03205	200 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	YHM2	Q04013	314 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	IRC25	Q07951	179 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	RPL28	P02406	149 aa	Known RBP	5.97	□□□□□ -1.45
MSB3	YNL293W	GPI18	P38211	433 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	SVP26	P38869	228 aa		5.97	□□□□□ -1.45
MSB3	YNL293W	MRS3	P10566	314 aa		5.96	□□□□□ -1.46
MSB3	YNL293W	YKL044W	P36092	106 aa		5.96	□□□□□ -1.46
MSB3	YNL293W	YCR006C	P25350	157 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	VMA3	P25515	160 aa		5.95	□□□□□ -1.46
MSB3	YNL293W	IES6	P32617	166 aa		5.95	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms