RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	NMA1	Q06178	401 aa	Known RBP	0.9	□□□□□ -2.27
TIF11	YMR260C	KEI1	Q06346	221 aa		0.9	□□□□□ -2.27
TIF11	YMR260C	RFU1	Q08003	200 aa		0.9	□□□□□ -2.27
TIF11	YMR260C	TAR1	Q8TGM6	124 aa		0.9	□□□□□ -2.27
TIF11	YMR260C	SPT14	P32363	452 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	MRPL15	P36523	253 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	ECM31	P38122	312 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	YEL014C	P39999	101 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	YGR201C	P42936	225 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	YGR039W	P53225	103 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	COF1	Q03048	143 aa	Known RBP	0.89	□□□□□ -2.27
TIF11	YMR260C	FIT1	Q04433	528 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	AVO2	Q04749	426 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	SCS22	Q6Q595	175 aa		0.89	□□□□□ -2.27
TIF11	YMR260C	DDR48	P18899	430 aa	Known RBP	0.88	□□□□□ -2.27
TIF11	YMR260C	SUI1	P32911	108 aa	Known RBP	0.88	□□□□□ -2.27
TIF11	YMR260C	SHB17	P36136	271 aa	Known RBP	0.88	□□□□□ -2.27
TIF11	YMR260C	GIM4	P40005	111 aa	Known RBP	0.88	□□□□□ -2.27
TIF11	YMR260C	APS3	P47064	194 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	SPG1	P50088	95 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	YGL230C	P53074	147 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	YGR042W	P53227	271 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	YMR007W	Q03675	126 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	YMR320W	Q04897	101 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	IRC19	Q07843	230 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	VAM10	Q08474	114 aa		0.88	□□□□□ -2.27
TIF11	YMR260C	KIN28	P06242	306 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	AQY2	P0CD90	149 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	HYP2	P23301	157 aa	Known RBP	0.87	□□□□□ -2.27
TIF11	YMR260C	CYC2	P38909	366 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	YFL051C	P43552	160 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	VMA10	P48836	114 aa	Known RBP	0.87	□□□□□ -2.27
TIF11	YMR260C	YGL204C	P53089	101 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	CSN9	Q03981	162 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	YPR153W	Q06537	140 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	YPR203W	Q08994	102 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	SPC3	Q12133	184 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	FCY1	Q12178	158 aa		0.87	□□□□□ -2.27
TIF11	YMR260C	HSP150	P32478	413 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	YKR070W	P36151	352 aa	Known RBP	0.86	□□□□□ -2.27
TIF11	YMR260C	POP7	P38291	140 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	IPT1	P38954	527 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	PHB1	P40961	287 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	GLC8	P41818	229 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	LSM8	P47093	109 aa	Known RBP	0.86	□□□□□ -2.27
TIF11	YMR260C	DIE2	P50076	525 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	SPC2	Q04969	178 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	RAF1	Q06891	181 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	CMC4	Q3E7A9	73 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	RIB3	Q99258	208 aa		0.86	□□□□□ -2.27
TIF11	YMR260C	NHP6A	P11632	93 aa	Known RBP	0.85	□□□□□ -2.27
TIF11	YMR260C	SUA7	P29055	345 aa	Predicted RBP	0.85	□□□□□ -2.27
TIF11	YMR260C	YBR027C	P38220	110 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	YHL037C	P38733	133 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	DCV1	P43595	202 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	EMC4	P53073	190 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	YNL019C	P53975	284 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	GPI11	Q06636	219 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	ATP14	Q12349	124 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	HUT1	Q12520	339 aa		0.85	□□□□□ -2.27
TIF11	YMR260C	DDP1	Q99321	188 aa	Known RBP	0.85	□□□□□ -2.27
TIF11	YMR260C	RPS1B	P23248	255 aa	Known RBP	0.84	□□□□□ -2.27
TIF11	YMR260C	YHR140W	P38842	239 aa		0.84	□□□□□ -2.27
TIF11	YMR260C	YDR278C	Q05612	105 aa		0.84	□□□□□ -2.27
TIF11	YMR260C	UBR1	P19812	1950 aa		0.84	□□□□□ -2.28
TIF11	YMR260C	COX5B	P00425	151 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	MRPL44	P19956	98 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	FYV5	P25585	152 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	ACP1	P32463	125 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	SRL3	P36167	246 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	YAR064W	P39563	99 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	HUA1	P40325	198 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	YIL102C	P40488	101 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	YCL001W-A	P87012	153 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	SOM1	Q05676	74 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	YLR361C-A	Q3E795	98 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	YNL277W-A	Q3E7Z0	62 aa		0.83	□□□□□ -2.28
TIF11	YMR260C	RIF1	P29539	1916 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	RPS20	P38701	121 aa	Known RBP	0.82	□□□□□ -2.28
TIF11	YMR260C	HPM1	P40481	377 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	YGR017W	P53210	297 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	SED1	Q01589	338 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	ELC1	Q03071	99 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	NAT5	Q08689	176 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	YOR385W	Q08909	290 aa		0.82	□□□□□ -2.28
TIF11	YMR260C	FMP49	A0A023PZB3	126 aa		0.81	□□□□□ -2.28
TIF11	YMR260C	RPL33A	P05744	107 aa	Known RBP	0.81	□□□□□ -2.28
TIF11	YMR260C	RPS1A	P33442	255 aa	Known RBP	0.81	□□□□□ -2.28
TIF11	YMR260C	RPL14A	P36105	138 aa	Known RBP	0.81	□□□□□ -2.28
TIF11	YMR260C	ATG8	P38182	117 aa	RIP-Chip data	0.81	□□□□□ -2.28	not detected
TIF11	YMR260C	PRS3	P38689	320 aa	Known RBP	0.81	□□□□□ -2.28
TIF11	YMR260C	RPL14B	P38754	138 aa	Known RBP	0.81	□□□□□ -2.28
TIF11	YMR260C	MPC1	P53157	130 aa	Known RBP	0.81	□□□□□ -2.28
TIF11	YMR260C	CNL1	Q06333	122 aa		0.81	□□□□□ -2.28
TIF11	YMR260C	Q0144	Q9ZZW2	109 aa		0.81	□□□□□ -2.28
TIF11	YMR260C	RPL37A	P49166	88 aa	Known RBP	0.8	□□□□□ -2.28
TIF11	YMR260C	DYN2	Q02647	92 aa		0.8	□□□□□ -2.28
TIF11	YMR260C	TMA23	Q03525	211 aa		0.8	□□□□□ -2.28
TIF11	YMR260C	CCW12	Q12127	133 aa		0.8	□□□□□ -2.28
TIF11	YMR260C	MHF1	Q3E835	90 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms