RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C YPD1Q07688 167 aa3.27□□□□□ -1.89
ATG17YLR423C USO1P25386 1790 aa3.27□□□□□ -1.89
ATG17YLR423C MAK31P23059 88 aa3.26□□□□□ -1.89
ATG17YLR423C CCS1P40202 249 aaKnown RBP3.26□□□□□ -1.89
ATG17YLR423C SOK1P40317 901 aa3.26□□□□□ -1.89
ATG17YLR423C MPM1P40364 252 aa3.26□□□□□ -1.89
ATG17YLR423C UBC7Q02159 165 aa3.26□□□□□ -1.89
ATG17YLR423C SEN2P16658 377 aa3.25□□□□□ -1.89
ATG17YLR423C YAP3P38749 330 aa3.25□□□□□ -1.89
ATG17YLR423C YNR064CP53750 290 aa3.25□□□□□ -1.89
ATG17YLR423C PKR1Q03880 122 aaKnown RBP3.25□□□□□ -1.89
ATG17YLR423C TY1B-JR2P47100 1755 aaKnown RBP3.25□□□□□ -1.89
ATG17YLR423C TY1B-ER2Q03619 1755 aa3.25□□□□□ -1.89
ATG17YLR423C TY1B-MR1Q04214 1755 aa3.25□□□□□ -1.89
ATG17YLR423C TY1B-MR2Q04670 1755 aaKnown RBP3.25□□□□□ -1.89
ATG17YLR423C TY1B-LR1Q12088 1755 aaKnown RBP3.25□□□□□ -1.89
ATG17YLR423C TY1B-NL1Q12112 1755 aa3.25□□□□□ -1.89
ATG17YLR423C TY1B-GR1Q12141 1755 aa3.25□□□□□ -1.89
ATG17YLR423C TY1B-BLQ12490 1755 aa3.25□□□□□ -1.89
ATG17YLR423C SIN3P22579 1536 aa3.24□□□□□ -1.89
ATG17YLR423C SPO14P36126 1683 aa3.24□□□□□ -1.89
ATG17YLR423C YHL042WP38729 150 aa3.24□□□□□ -1.89
ATG17YLR423C YEL067CP39978 195 aa3.24□□□□□ -1.89
ATG17YLR423C VPS15P22219 1454 aa3.23□□□□□ -1.89
ATG17YLR423C YOR1P53049 1477 aa3.23□□□□□ -1.89
ATG17YLR423C YBL010CP32788 280 aa3.23□□□□□ -1.89
ATG17YLR423C MOG1P47123 218 aa3.23□□□□□ -1.89
ATG17YLR423C MET31Q03081 177 aa3.23□□□□□ -1.89
ATG17YLR423C YMR252CQ04814 134 aa3.23□□□□□ -1.89
ATG17YLR423C ELP6Q04868 273 aa3.23□□□□□ -1.89
ATG17YLR423C ATG10Q07879 167 aa3.23□□□□□ -1.89
ATG17YLR423C YDL157CQ12082 118 aa3.23□□□□□ -1.89
ATG17YLR423C RPO21P04050 1733 aaKnown RBP3.22□□□□□ -1.89
ATG17YLR423C YGR269WP40326 108 aa3.22□□□□□ -1.89
ATG17YLR423C PDR15Q04182 1529 aaKnown RBP3.22□□□□□ -1.89
ATG17YLR423C SCC2Q04002 1493 aa3.22□□□□□ -1.89
ATG17YLR423C LSM1P47017 172 aaKnown RBP3.21□□□□□ -1.9
ATG17YLR423C YJR015WP47090 510 aa3.21□□□□□ -1.9
ATG17YLR423C YDR102CQ03864 110 aa3.21□□□□□ -1.9
ATG17YLR423C YPK9Q12697 1472 aa3.21□□□□□ -1.9
ATG17YLR423C DNF3Q12674 1656 aa3.2□□□□□ -1.9
ATG17YLR423C NUP170P38181 1502 aa3.2□□□□□ -1.9
ATG17YLR423C SPS2P08459 502 aa3.19□□□□□ -1.9
ATG17YLR423C YPT31P38555 223 aaKnown RBP3.19□□□□□ -1.9
ATG17YLR423C IPI1P38803 334 aaPredicted RBP3.19□□□□□ -1.9
ATG17YLR423C YEL008WP40001 126 aa3.19□□□□□ -1.9
ATG17YLR423C YER181CP40097 107 aa3.19□□□□□ -1.9
ATG17YLR423C YPR114WQ06107 315 aa3.19□□□□□ -1.9
ATG17YLR423C YCL042WP25572 119 aa3.18□□□□□ -1.9
ATG17YLR423C YDC1Q02896 317 aa3.18□□□□□ -1.9
ATG17YLR423C UBC8P28263 218 aa3.17□□□□□ -1.9
ATG17YLR423C ADE6P38972 1358 aaKnown RBP3.16□□□□□ -1.9
ATG17YLR423C PHO13P19881 312 aa3.16□□□□□ -1.9
ATG17YLR423C YLR422WQ06409 1932 aa3.16□□□□□ -1.9
ATG17YLR423C ULS1Q08562 1619 aa3.15□□□□□ -1.9
ATG17YLR423C ETR1P38071 380 aa3.15□□□□□ -1.91
ATG17YLR423C YJL218WP40892 196 aaKnown RBP3.15□□□□□ -1.91
ATG17YLR423C CIN5P40917 295 aa3.15□□□□□ -1.91
ATG17YLR423C YFL065CP43539 102 aa3.15□□□□□ -1.91
ATG17YLR423C RRT7Q07829 113 aa3.15□□□□□ -1.91
ATG17YLR423C PDR10P51533 1564 aa3.15□□□□□ -1.91
ATG17YLR423C NUP159P40477 1460 aa3.15□□□□□ -1.91
ATG17YLR423C MRPL24P36525 258 aaPredicted RBP3.14□□□□□ -1.91
ATG17YLR423C FAS1P07149 2051 aaKnown RBP3.13□□□□□ -1.91
ATG17YLR423C TRM732Q03496 1420 aa3.13□□□□□ -1.91
ATG17YLR423C RPS25BP0C0T4 108 aaKnown RBP3.13□□□□□ -1.91
ATG17YLR423C INO4P13902 151 aa3.13□□□□□ -1.91
ATG17YLR423C RPS25AQ3E792 108 aaPredicted RBP3.13□□□□□ -1.91
ATG17YLR423C CHC1P22137 1653 aaKnown RBP3.12□□□□□ -1.91
ATG17YLR423C YDL241WQ07738 123 aa3.12□□□□□ -1.91
ATG17YLR423C COA3Q3E7B2 85 aa3.12□□□□□ -1.91
ATG17YLR423C SPT14P32363 452 aa3.11□□□□□ -1.91
ATG17YLR423C TAR1Q8TGM6 124 aa3.11□□□□□ -1.91
ATG17YLR423C ARO1P08566 1588 aaKnown RBP3.11□□□□□ -1.91
ATG17YLR423C MLP2P40457 1679 aa3.11□□□□□ -1.91
ATG17YLR423C MMS22Q06164 1454 aa3.1□□□□□ -1.91
ATG17YLR423C DUR1,2P32528 1835 aaKnown RBP3.1□□□□□ -1.91
ATG17YLR423C MRS4P23500 304 aa3.1□□□□□ -1.91
ATG17YLR423C GEP7P53171 287 aa3.1□□□□□ -1.91
ATG17YLR423C YGL041W-AP0C5N3 154 aa3.08□□□□□ -1.92
ATG17YLR423C AHT1P29589 182 aa3.08□□□□□ -1.92
ATG17YLR423C ATP19P81451 68 aa3.08□□□□□ -1.92
ATG17YLR423C EST3Q03096 181 aa3.08□□□□□ -1.92
ATG17YLR423C AVO2Q04749 426 aa3.08□□□□□ -1.92
ATG17YLR423C UBR2Q07963 1872 aa3.07□□□□□ -1.92
ATG17YLR423C YHR212W-AP0CX91 67 aa3.07□□□□□ -1.92
ATG17YLR423C GPI2P46961 280 aa3.07□□□□□ -1.92
ATG17YLR423C RBL2P48606 106 aaKnown RBP3.07□□□□□ -1.92
ATG17YLR423C YDR366CP87287 132 aa3.07□□□□□ -1.92
ATG17YLR423C FMN1Q03778 218 aa3.07□□□□□ -1.92
ATG17YLR423C RFU1Q08003 200 aa3.07□□□□□ -1.92
ATG17YLR423C BEM2P39960 2167 aaKnown RBP3.07□□□□□ -1.92
ATG17YLR423C RCF2P53721 224 aa3.05□□□□□ -1.92
ATG17YLR423C NMA1Q06178 401 aaKnown RBP3.05□□□□□ -1.92
ATG17YLR423C KEI1Q06346 221 aa3.05□□□□□ -1.92
ATG17YLR423C BUD3P25558 1636 aa3.04□□□□□ -1.92
ATG17YLR423C PRE1P22141 198 aaKnown RBP3.04□□□□□ -1.92
ATG17YLR423C HSP12P22943 109 aaKnown RBP3.04□□□□□ -1.92
ATG17YLR423C YGR201CP42936 225 aa3.04□□□□□ -1.92
ATG17YLR423C CYR1P08678 2026 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms