RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	FMP23	P38231	175 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	TTI2	P47168	421 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	SPG1	P50088	95 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	NUP49	Q02199	472 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
YCS4	YLR272C	MOT1	P32333	1867 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	SOD1	P00445	154 aa	Known RBP	0.71	□□□□□ -2.3
YCS4	YLR272C	HSP150	P32478	413 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	UPS2	P35200	230 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	RFC2	P40348	353 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	CIN5	P40917	295 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	YNL140C	P53910	189 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	YNL033W	P53964	284 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	SPC24	Q04477	213 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	SHH3	Q04487	196 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	YPR114W	Q06107	315 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	NMT1	P14743	455 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	ERD2	P18414	219 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	SPT14	P32363	452 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	SFT2	P38166	215 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	YFL019C	P43576	117 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	VMA10	P48836	114 aa	Known RBP	0.71	□□□□□ -2.3
YCS4	YLR272C	ACT1	P60010	375 aa	Known RBP	0.71	□□□□□ -2.3
YCS4	YLR272C	MZM1	Q03429	123 aa	Predicted RBP	0.71	□□□□□ -2.3
YCS4	YLR272C	NHP10	Q03435	203 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	RAF1	Q06891	181 aa		0.71	□□□□□ -2.3
YCS4	YLR272C	PRP11	Q07350	266 aa	Predicted RBP	0.71	□□□□□ -2.3
YCS4	YLR272C	YLR236C	A0A023PZG4	107 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	RPS1A	P33442	255 aa	Known RBP	0.7	□□□□□ -2.3
YCS4	YLR272C	YBR219C	P38317	127 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	AIM18	P38884	321 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	UBC7	Q02159	165 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	SWP1	Q02795	286 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	AIM36	Q03798	255 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	LDB18	Q07887	179 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	NSL1	Q12143	216 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	YOR214C	Q12282	236 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	HUT1	Q12520	339 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	YLR361C-A	Q3E795	98 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	ECM29	P38737	1868 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	RPL35A	P0CX84	120 aa	Known RBP	0.7	□□□□□ -2.3
YCS4	YLR272C	RPL35B	P0CX85	120 aa	Known RBP	0.7	□□□□□ -2.3
YCS4	YLR272C	FPR1	P20081	114 aa	Known RBP	0.7	□□□□□ -2.3
YCS4	YLR272C	ARO7	P32178	256 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	ACP1	P32463	125 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	YJL218W	P40892	196 aa	Known RBP	0.7	□□□□□ -2.3
YCS4	YLR272C	YJR146W	P47174	117 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	CUE4	Q04201	117 aa	Predicted RBP	0.7	□□□□□ -2.3
YCS4	YLR272C	YNL277W-A	Q3E7Z0	62 aa		0.7	□□□□□ -2.3
YCS4	YLR272C	COX8	P04039	78 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	SUA7	P29055	345 aa	Predicted RBP	0.69	□□□□□ -2.3
YCS4	YLR272C	YKL075C	P36083	450 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	YEL028W	P39989	153 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	PHB1	P40961	287 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	YFR045W	P43617	309 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	RBL2	P48606	106 aa	Known RBP	0.69	□□□□□ -2.3
YCS4	YLR272C	CGI121	Q03705	181 aa	Known RBP	0.69	□□□□□ -2.3
YCS4	YLR272C	FMN1	Q03778	218 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	YDR249C	Q03787	373 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	UPS1	Q05776	175 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	ATP5	P09457	212 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	TFC1	P32367	649 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	AGA2	P32781	87 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	UMP1	P38293	148 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	DAN1	P47178	298 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	EMC4	P53073	190 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	YNL019C	P53975	284 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	SMT3	Q12306	101 aa	Known RBP	0.69	□□□□□ -2.3
YCS4	YLR272C	SPO13	P23624	291 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	YOR062C	P36025	268 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	AYR1	P40471	297 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	FIP1	P45976	327 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	RSM10	Q03201	203 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	PKR1	Q03880	122 aa	Known RBP	0.69	□□□□□ -2.3
YCS4	YLR272C	AVO2	Q04749	426 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	YDL180W	Q12301	547 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	RDI1	Q12434	202 aa		0.69	□□□□□ -2.3
YCS4	YLR272C	AHT1	P29589	182 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	NUF2	P33895	451 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	SRL3	P36167	246 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	RPS20	P38701	121 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	NSA2	P40078	261 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	SWM2	P40342	146 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	YMR315W	Q04869	349 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	YMR321C	Q04898	105 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	ATG40	Q99325	256 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	COX5B	P00425	151 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	RSA4	P25382	515 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	TCA17	P32613	152 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	MPD1	Q12404	318 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	YDL012C	Q12489	107 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	LAA1	P39526	2014 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	HAP3	P13434	144 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	KNH1	P50112	268 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	MPC1	P53157	130 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	HSK3	P69852	69 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	HPT1	Q04178	221 aa	Known RBP	0.68	□□□□□ -2.3
YCS4	YLR272C	SDH7	Q04401	133 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	VPS68	Q12016	184 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	YDR524C-B	Q3E6R4	66 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms