RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C TY1A-ML2P0CX76 440 aa8.12□□□□□ -1.11
SHM2YLR058C ERS1P17261 260 aa8.12□□□□□ -1.11
SHM2YLR058C NTF2P33331 125 aaKnown RBP8.12□□□□□ -1.11
SHM2YLR058C PHD1P36093 366 aa8.12□□□□□ -1.11
SHM2YLR058C CYB5P40312 120 aa8.12□□□□□ -1.11
SHM2YLR058C AIM24P47127 394 aa8.12□□□□□ -1.11
SHM2YLR058C TIM21P53220 239 aa8.12□□□□□ -1.11
SHM2YLR058C CAX4P53223 239 aa8.12□□□□□ -1.11
SHM2YLR058C UBC7Q02159 165 aa8.12□□□□□ -1.11
SHM2YLR058C RAV2Q03956 351 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-GR1Q12085 440 aa8.12□□□□□ -1.11
SHM2YLR058C YPR145C-AQ2V2P0 78 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.12□□□□□ -1.11
SHM2YLR058C TY1A-OLQ92392 440 aaKnown RBP8.12□□□□□ -1.11
SHM2YLR058C ADH3P07246 375 aaKnown RBP8.12□□□□□ -1.11
SHM2YLR058C MRS1P07266 363 aa8.12□□□□□ -1.11
SHM2YLR058C YHR212W-AP0CX91 67 aa8.12□□□□□ -1.11
SHM2YLR058C SNF11P38956 169 aa8.12□□□□□ -1.11
SHM2YLR058C HUA1P40325 198 aa8.12□□□□□ -1.11
SHM2YLR058C HIT1P46973 164 aa8.12□□□□□ -1.11
SHM2YLR058C TOM7P53507 60 aa8.12□□□□□ -1.11
SHM2YLR058C ATG39Q06159 398 aa8.12□□□□□ -1.11
SHM2YLR058C ATX2Q12067 313 aa8.12□□□□□ -1.11
SHM2YLR058C COX2P00410 251 aa8.11□□□□□ -1.11
SHM2YLR058C MRPL4P36517 319 aa8.11□□□□□ -1.11
SHM2YLR058C MRPS9P38120 278 aa8.11□□□□□ -1.11
SHM2YLR058C ATG8P38182 117 aaRIP-Chip data8.1□□□□□ -1.11not detected
SHM2YLR058C MBB1P39534 108 aa8.1□□□□□ -1.11
SHM2YLR058C GPI2P46961 280 aa8.1□□□□□ -1.11
SHM2YLR058C LCB3P47013 409 aa8.1□□□□□ -1.11
SHM2YLR058C YLR302CO13544 120 aa8.09□□□□□ -1.11
SHM2YLR058C VMA21P41806 77 aa8.09□□□□□ -1.11
SHM2YLR058C DAD3P69850 94 aa8.09□□□□□ -1.11
SHM2YLR058C IZH1Q03419 316 aa8.09□□□□□ -1.11
SHM2YLR058C LRS4Q04087 347 aaKnown RBP8.09□□□□□ -1.11
SHM2YLR058C YOL160WQ08321 113 aa8.09□□□□□ -1.11
SHM2YLR058C RPB3P16370 318 aaKnown RBP8.08□□□□□ -1.12
SHM2YLR058C CMC1P36064 111 aa8.08□□□□□ -1.12
SHM2YLR058C MST28P39552 234 aa8.08□□□□□ -1.12
SHM2YLR058C PGD1P40356 397 aa8.08□□□□□ -1.12
SHM2YLR058C MST27P53176 234 aa8.08□□□□□ -1.12
SHM2YLR058C YGR025WP53216 100 aa8.08□□□□□ -1.12
SHM2YLR058C TIM11P81449 96 aaPredicted RBP8.08□□□□□ -1.12
SHM2YLR058C NAT3Q06504 195 aa8.08□□□□□ -1.12
SHM2YLR058C MRPL49P40858 161 aaPredicted RBP8.07□□□□□ -1.12
SHM2YLR058C HHO1P53551 258 aa8.07□□□□□ -1.12
SHM2YLR058C YLR118CQ12354 227 aa8.07□□□□□ -1.12
SHM2YLR058C FMP49A0A023PZB3 126 aa8.06□□□□□ -1.12
SHM2YLR058C HTB2P02294 131 aa8.06□□□□□ -1.12
SHM2YLR058C SRP21P32342 167 aa8.06□□□□□ -1.12
SHM2YLR058C UTR5P32630 166 aa8.06□□□□□ -1.12
SHM2YLR058C YBR090CP38253 122 aa8.06□□□□□ -1.12
SHM2YLR058C STP4Q07351 490 aa8.06□□□□□ -1.12
SHM2YLR058C DAN1P47178 298 aa8.05□□□□□ -1.12
SHM2YLR058C YML108WQ03759 105 aa8.05□□□□□ -1.12
SHM2YLR058C TAR1Q8TGM6 124 aa8.05□□□□□ -1.12
SHM2YLR058C MSN1P22148 382 aa8.04□□□□□ -1.12
SHM2YLR058C YBR144CP34215 104 aa8.04□□□□□ -1.12
SHM2YLR058C HSP10P38910 106 aa8.04□□□□□ -1.12
SHM2YLR058C SRP14P38985 146 aa8.04□□□□□ -1.12
SHM2YLR058C PAU15P40585 124 aa8.04□□□□□ -1.12
SHM2YLR058C MGA1P53050 456 aa8.04□□□□□ -1.12
SHM2YLR058C RRG8Q06109 277 aa8.04□□□□□ -1.12
SHM2YLR058C SMT3Q12306 101 aaKnown RBP8.04□□□□□ -1.12
SHM2YLR058C MRPL20P22354 195 aaPredicted RBP8.03□□□□□ -1.12
SHM2YLR058C SDH4P37298 181 aa8.03□□□□□ -1.12
SHM2YLR058C YPT10P38146 199 aa8.03□□□□□ -1.12
SHM2YLR058C ATP19P81451 68 aa8.03□□□□□ -1.12
SHM2YLR058C IZH3Q07959 543 aa8.03□□□□□ -1.12
SHM2YLR058C GEP3Q08622 556 aa8.03□□□□□ -1.12
SHM2YLR058C RPL31BP0C2H9 113 aaKnown RBP8.03□□□□□ -1.12
SHM2YLR058C YMR141CP40211 102 aa8.03□□□□□ -1.12
SHM2YLR058C SIM1P40472 476 aa8.03□□□□□ -1.12
SHM2YLR058C TDA4P47153 279 aa8.03□□□□□ -1.12
SHM2YLR058C COX18P53239 316 aa8.03□□□□□ -1.12
SHM2YLR058C DCN1Q12395 269 aa8.03□□□□□ -1.12
SHM2YLR058C YOR011W-AQ3E807 68 aa8.03□□□□□ -1.12
SHM2YLR058C NHP6AP11632 93 aaKnown RBP8.02□□□□□ -1.13
SHM2YLR058C RTG1P32607 177 aa8.02□□□□□ -1.13
SHM2YLR058C AME1P38313 324 aa8.02□□□□□ -1.13
SHM2YLR058C NSE4P43124 402 aa8.02□□□□□ -1.13
SHM2YLR058C YIP3P53633 176 aa8.02□□□□□ -1.13
SHM2YLR058C ZEO1Q08245 113 aa8.02□□□□□ -1.13
SHM2YLR058C YOP1Q12402 180 aa8.02□□□□□ -1.13
SHM2YLR058C PRM7Q12459 698 aa8.02□□□□□ -1.13
SHM2YLR058C POF1P25576 258 aa8.01□□□□□ -1.13
SHM2YLR058C MOG1P47123 218 aa8.01□□□□□ -1.13
SHM2YLR058C DAD4P69851 72 aa8.01□□□□□ -1.13
SHM2YLR058C TIR1P10863 254 aa8□□□□□ -1.13
SHM2YLR058C PRE9P23638 258 aaKnown RBP8□□□□□ -1.13
SHM2YLR058C MIG1P27705 504 aa8□□□□□ -1.13
SHM2YLR058C FZF1P32805 299 aa8□□□□□ -1.13
SHM2YLR058C PRE5P40302 234 aaKnown RBP8□□□□□ -1.13
SHM2YLR058C YGL185CP53100 379 aa8□□□□□ -1.13
SHM2YLR058C FYV6P53913 173 aa8□□□□□ -1.13
SHM2YLR058C YOR105WQ08504 108 aa8□□□□□ -1.13
SHM2YLR058C SNU23Q12368 194 aaPredicted RBP8□□□□□ -1.13
SHM2YLR058C YNL146C-AQ3E7Z1 64 aa8□□□□□ -1.13
SHM2YLR058C YGL010WP25338 174 aa7.99□□□□□ -1.13
SHM2YLR058C ECM33P38248 429 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms