RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C SDH4P37298 181 aa3.34□□□□□ -1.87
SRP40YKR092C SDS24P38314 527 aa3.34□□□□□ -1.87
SRP40YKR092C ATX1P38636 73 aa3.34□□□□□ -1.87
SRP40YKR092C SPO73P40031 143 aa3.34□□□□□ -1.87
SRP40YKR092C YIL029CP40538 142 aa3.34□□□□□ -1.87
SRP40YKR092C SAS2P40963 338 aa3.34□□□□□ -1.87
SRP40YKR092C CAX4P53223 239 aa3.34□□□□□ -1.87
SRP40YKR092C YGR164WP53291 111 aa3.34□□□□□ -1.87
SRP40YKR092C LSM7P53905 115 aaKnown RBP3.34□□□□□ -1.87
SRP40YKR092C YPL039WQ03080 316 aa3.34□□□□□ -1.87
SRP40YKR092C EMI1Q04406 187 aa3.34□□□□□ -1.87
SRP40YKR092C YPL162CQ12042 273 aa3.34□□□□□ -1.87
SRP40YKR092C YOR097CQ12274 175 aaPredicted RBP3.34□□□□□ -1.87
SRP40YKR092C TRP1P00912 224 aa3.33□□□□□ -1.88
SRP40YKR092C RPL16BP26785 198 aaKnown RBP3.33□□□□□ -1.88
SRP40YKR092C UTR5P32630 166 aa3.33□□□□□ -1.88
SRP40YKR092C CSE2P33308 149 aa3.33□□□□□ -1.88
SRP40YKR092C RPL14AP36105 138 aaKnown RBP3.33□□□□□ -1.88
SRP40YKR092C YKR070WP36151 352 aaKnown RBP3.33□□□□□ -1.88
SRP40YKR092C YAR029WP39549 74 aa3.33□□□□□ -1.88
SRP40YKR092C MPM1P40364 252 aa3.33□□□□□ -1.88
SRP40YKR092C VMA21P41806 77 aa3.33□□□□□ -1.88
SRP40YKR092C CWP2P43497 92 aa3.33□□□□□ -1.88
SRP40YKR092C KEG1P43614 200 aa3.33□□□□□ -1.88
SRP40YKR092C AIM25P47140 327 aa3.33□□□□□ -1.88
SRP40YKR092C TDA4P47153 279 aa3.33□□□□□ -1.88
SRP40YKR092C TOS8P53147 276 aa3.33□□□□□ -1.88
SRP40YKR092C MRPS16Q02608 121 aa3.33□□□□□ -1.88
SRP40YKR092C FCF1Q05498 189 aaPredicted RBP3.33□□□□□ -1.88
SRP40YKR092C YLR012CQ07927 99 aa3.33□□□□□ -1.88
SRP40YKR092C NAT5Q08689 176 aa3.33□□□□□ -1.88
SRP40YKR092C YPL245WQ12179 454 aaKnown RBP3.33□□□□□ -1.88
SRP40YKR092C YDL009CQ12210 107 aa3.33□□□□□ -1.88
SRP40YKR092C YPR064WQ12492 139 aa3.33□□□□□ -1.88
SRP40YKR092C VMA9Q3E7B6 73 aa3.33□□□□□ -1.88
SRP40YKR092C OPI3P05375 206 aa3.32□□□□□ -1.88
SRP40YKR092C CPA1P07258 411 aaKnown RBP3.32□□□□□ -1.88
SRP40YKR092C FMP46P36141 133 aaKnown RBP3.32□□□□□ -1.88
SRP40YKR092C IRC22P40006 225 aa3.32□□□□□ -1.88
SRP40YKR092C YER181CP40097 107 aa3.32□□□□□ -1.88
SRP40YKR092C CYB5P40312 120 aa3.32□□□□□ -1.88
SRP40YKR092C FLX1P40464 311 aa3.32□□□□□ -1.88
SRP40YKR092C YJL218WP40892 196 aaKnown RBP3.32□□□□□ -1.88
SRP40YKR092C UBC13P52490 153 aa3.32□□□□□ -1.88
SRP40YKR092C YGL260WP53056 76 aa3.32□□□□□ -1.88
SRP40YKR092C YGL034CP53186 121 aa3.32□□□□□ -1.88
SRP40YKR092C SPG4Q04438 115 aa3.32□□□□□ -1.88
SRP40YKR092C IZH2Q12442 317 aa3.32□□□□□ -1.88
SRP40YKR092C TSC3Q3E790 80 aa3.32□□□□□ -1.88
SRP40YKR092C MBF1O14467 151 aaKnown RBP3.31□□□□□ -1.88
SRP40YKR092C GEP4P38812 185 aa3.31□□□□□ -1.88
SRP40YKR092C YHR140WP38842 239 aa3.31□□□□□ -1.88
SRP40YKR092C YGL088WP53151 121 aa3.31□□□□□ -1.88
SRP40YKR092C MPC1P53157 130 aaKnown RBP3.31□□□□□ -1.88
SRP40YKR092C ALG9P53868 555 aaKnown RBP3.31□□□□□ -1.88
SRP40YKR092C IGO1P53897 168 aa3.31□□□□□ -1.88
SRP40YKR092C ADD37Q03233 198 aa3.31□□□□□ -1.88
SRP40YKR092C BET5Q03630 159 aa3.31□□□□□ -1.88
SRP40YKR092C YPR174CQ06616 221 aaPredicted RBP3.31□□□□□ -1.88
SRP40YKR092C PRM3Q08931 133 aa3.31□□□□□ -1.88
SRP40YKR092C YPR145C-AQ2V2P0 78 aa3.31□□□□□ -1.88
SRP40YKR092C YAL064W-BO13512 126 aa3.3□□□□□ -1.88
SRP40YKR092C RPS25BP0C0T4 108 aaKnown RBP3.3□□□□□ -1.88
SRP40YKR092C YAR066WP0CX18 203 aa3.3□□□□□ -1.88
SRP40YKR092C YHR214WP0CX19 203 aa3.3□□□□□ -1.88
SRP40YKR092C SPT4P32914 102 aaPredicted RBP3.3□□□□□ -1.88
SRP40YKR092C MRPL39P36533 70 aa3.3□□□□□ -1.88
SRP40YKR092C MIX23P38162 196 aa3.3□□□□□ -1.88
SRP40YKR092C TRS20P38334 175 aa3.3□□□□□ -1.88
SRP40YKR092C YHR138CP38841 114 aaPredicted RBP3.3□□□□□ -1.88
SRP40YKR092C PEX17P40155 199 aa3.3□□□□□ -1.88
SRP40YKR092C SWS2P53937 143 aa3.3□□□□□ -1.88
SRP40YKR092C RNH201P53942 307 aa3.3□□□□□ -1.88
SRP40YKR092C MET31Q03081 177 aa3.3□□□□□ -1.88
SRP40YKR092C YML079WQ03629 201 aa3.3□□□□□ -1.88
SRP40YKR092C YMR082CQ04276 118 aa3.3□□□□□ -1.88
SRP40YKR092C RPS25AQ3E792 108 aaPredicted RBP3.3□□□□□ -1.88
SRP40YKR092C HTL1Q9URQ5 78 aa3.3□□□□□ -1.88
SRP40YKR092C TOM40P23644 387 aaKnown RBP3.29□□□□□ -1.88
SRP40YKR092C SFT2P38166 215 aa3.29□□□□□ -1.88
SRP40YKR092C CUP9P41817 306 aa3.29□□□□□ -1.88
SRP40YKR092C EMC4P53073 190 aa3.29□□□□□ -1.88
SRP40YKR092C ERV29P53337 310 aa3.29□□□□□ -1.88
SRP40YKR092C BUD25P85052 153 aa3.29□□□□□ -1.88
SRP40YKR092C YPR096CO13587 100 aa3.28□□□□□ -1.88
SRP40YKR092C MIG1P27705 504 aa3.28□□□□□ -1.88
SRP40YKR092C GLC7P32598 312 aaKnown RBP3.28□□□□□ -1.88
SRP40YKR092C YRA2P36036 203 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SRP40YKR092C NRG2P38082 220 aa3.28□□□□□ -1.88
SRP40YKR092C CCS1P40202 249 aaKnown RBP3.28□□□□□ -1.88
SRP40YKR092C EMC5P40540 141 aa3.28□□□□□ -1.88
SRP40YKR092C PAU15P40585 124 aa3.28□□□□□ -1.88
SRP40YKR092C PHS1P40857 217 aa3.28□□□□□ -1.88
SRP40YKR092C FIP1P45976 327 aa3.28□□□□□ -1.88
SRP40YKR092C YPS5P53057 165 aa3.28□□□□□ -1.88
SRP40YKR092C VHT1P53241 593 aa3.28□□□□□ -1.88
SRP40YKR092C PET191Q02772 108 aa3.28□□□□□ -1.88
SRP40YKR092C AVO2Q04749 426 aa3.28□□□□□ -1.88
SRP40YKR092C TIM18Q08749 192 aa3.28□□□□□ -1.88
SRP40YKR092C ECM29P38737 1868 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms