RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	OST1	P41543	476 aa	Known RBP	4.12	□□□□□ -1.75
DOA1	YKL213C	HNT2	P49775	206 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	VHT1	P53241	593 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	WSC2	P53832	503 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	BUD25	P85052	153 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	MRPS16	Q02608	121 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	UPS1	Q05776	175 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	LOA1	Q06508	300 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	RRS1	Q08746	203 aa	Known RBP	4.12	□□□□□ -1.75
DOA1	YKL213C	YPR145C-A	Q2V2P0	78 aa		4.12	□□□□□ -1.75
DOA1	YKL213C	TY1A-H	P0C2I4	478 aa	Known RBP	4.11	□□□□□ -1.75
DOA1	YKL213C	MTR2	P34232	184 aa	Known RBP	4.11	□□□□□ -1.75
DOA1	YKL213C	ECM33	P38248	429 aa	Known RBP	4.11	□□□□□ -1.75
DOA1	YKL213C	UMP1	P38293	148 aa		4.11	□□□□□ -1.75
DOA1	YKL213C	ARC40	P38328	384 aa	Known RBP	4.11	□□□□□ -1.75
DOA1	YKL213C	KEI1	Q06346	221 aa		4.11	□□□□□ -1.75
DOA1	YKL213C	PIN3	Q06449	215 aa		4.11	□□□□□ -1.75
DOA1	YKL213C	PAU23	Q07987	124 aa		4.11	□□□□□ -1.75
DOA1	YKL213C	NCE102	Q12207	173 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
DOA1	YKL213C	PAU17	Q12370	124 aa		4.11	□□□□□ -1.75
DOA1	YKL213C	MSI1	P13712	422 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	MTC7	P32633	139 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YND1	P40009	630 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YIL029C	P40538	142 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YFR045W	P43617	309 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	POS5	Q06892	414 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YLR042C	Q07990	161 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YOR097C	Q12274	175 aa	Predicted RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	YLR412C-A	Q3E742	68 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YOS1	Q3E834	85 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	CYC1	P00044	109 aa	Predicted RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	RPS23A	P0CX29	145 aa	Known RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	RPS23B	P0CX30	145 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	RPL2A	P0CX45	254 aa	Known RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	RPL2B	P0CX46	254 aa	Known RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	HMRA1	P0CY11	126 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	NOP1	P15646	327 aa	Known RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	SDH4	P37298	181 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	SAS2	P40963	338 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	BXI1	P48558	297 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	PDR17	P53844	350 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	YIF1	P53845	314 aa	Known RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	YPR098C	Q06089	161 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	ERV2	Q12284	196 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	UTP23	Q12339	254 aa	Known RBP	4.1	□□□□□ -1.75
DOA1	YKL213C	ODC2	Q99297	307 aa		4.1	□□□□□ -1.75
DOA1	YKL213C	GAR1	P28007	205 aa	Known RBP	4.09	□□□□□ -1.75
DOA1	YKL213C	TEM1	P38987	245 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	YER079W	P40052	210 aa	Known RBP	4.09	□□□□□ -1.75
DOA1	YKL213C	GET2	P40056	285 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	CAT5	P41735	233 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	VMA21	P41806	77 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	EGT2	P42835	1041 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	YGR219W	P53307	113 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	LSM7	P53905	115 aa	Known RBP	4.09	□□□□□ -1.75
DOA1	YKL213C	GAT3	Q07928	141 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	YNL277W-A	Q3E7Z0	62 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	IGO2	Q9P305	131 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	Q0142	Q9ZZW4	58 aa		4.09	□□□□□ -1.75
DOA1	YKL213C	UTR5	P32630	166 aa		4.09	□□□□□ -1.76
DOA1	YKL213C	SWD2	P36104	329 aa	Predicted RBP	4.09	□□□□□ -1.76
DOA1	YKL213C	YFL065C	P43539	102 aa		4.09	□□□□□ -1.76
DOA1	YKL213C	SED1	Q01589	338 aa		4.09	□□□□□ -1.76
DOA1	YKL213C	NAT5	Q08689	176 aa		4.09	□□□□□ -1.76
DOA1	YKL213C	YPR203W	Q08994	102 aa		4.09	□□□□□ -1.76
DOA1	YKL213C	COX10	P21592	462 aa		4.08	□□□□□ -1.76
DOA1	YKL213C	SOR1	P35497	357 aa	Known RBP	4.08	□□□□□ -1.76
DOA1	YKL213C	TRS20	P38334	175 aa		4.08	□□□□□ -1.76
DOA1	YKL213C	SMD3	P43321	101 aa	Known RBP	4.08	□□□□□ -1.76
DOA1	YKL213C	SFT1	P43682	97 aa		4.08	□□□□□ -1.76
DOA1	YKL213C	CAB4	P53332	305 aa		4.08	□□□□□ -1.76
DOA1	YKL213C	SOR2	Q07786	357 aa		4.08	□□□□□ -1.76
DOA1	YKL213C	DIF1	O13577	133 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	MRS1	P07266	363 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	YPL073C	P40323	161 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	MSL1	P40567	111 aa	Predicted RBP	4.07	□□□□□ -1.76
DOA1	YKL213C	MID1	P41821	548 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	AIM25	P47140	327 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	VPS71	Q03433	280 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	VBA1	Q04301	562 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	FCF1	Q05498	189 aa	Predicted RBP	4.07	□□□□□ -1.76
DOA1	YKL213C	YOR186W	Q08560	144 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	MBF1	O14467	151 aa	Known RBP	4.07	□□□□□ -1.76
DOA1	YKL213C	ACB1	P31787	87 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	RPB11	P38902	120 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	PRM5	P40476	318 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	TTI2	P47168	421 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	GEP7	P53171	287 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	SMM1	P53720	384 aa	Known RBP	4.07	□□□□□ -1.76
DOA1	YKL213C	YPL264C	Q08980	353 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	EAF3	Q12432	401 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	YBR182C-A	Q8TGU6	64 aa		4.07	□□□□□ -1.76
DOA1	YKL213C	RPS31	P05759	152 aa	Known RBP	4.06	□□□□□ -1.76
DOA1	YKL213C	MRPL20	P22354	195 aa	Predicted RBP	4.06	□□□□□ -1.76
DOA1	YKL213C	MIG1	P27705	504 aa		4.06	□□□□□ -1.76
DOA1	YKL213C	ZRT1	P32804	376 aa		4.06	□□□□□ -1.76
DOA1	YKL213C	ARP3	P47117	449 aa	Known RBP	4.06	□□□□□ -1.76
DOA1	YKL213C	PBP4	Q07362	185 aa	Known RBP	4.06	□□□□□ -1.76
DOA1	YKL213C	CPD1	P53314	239 aa		4.06	□□□□□ -1.76
DOA1	YKL213C	YNL046W	P53956	172 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms