RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W REP2P03872 296 aa1.75□□□□□ -2.13
NUP100YKL068W RPC19P28000 142 aaKnown RBP1.75□□□□□ -2.13
NUP100YKL068W RCN1P36054 211 aa1.75□□□□□ -2.13
NUP100YKL068W VTC1P40046 129 aaRIP-Chip data1.75□□□□□ -2.13not detected
NUP100YKL068W FIS1P40515 155 aa1.75□□□□□ -2.13
NUP100YKL068W PFS2P42841 465 aaKnown RBP1.75□□□□□ -2.13
NUP100YKL068W XPT1P47165 209 aa1.75□□□□□ -2.13
NUP100YKL068W YGL260WP53056 76 aa1.75□□□□□ -2.13
NUP100YKL068W CAX4P53223 239 aa1.75□□□□□ -2.13
NUP100YKL068W YMR099CQ03161 297 aaKnown RBP1.75□□□□□ -2.13
NUP100YKL068W NAT3Q06504 195 aa1.75□□□□□ -2.13
NUP100YKL068W YAL067W-AQ8TGK6 75 aa1.75□□□□□ -2.13
NUP100YKL068W UBR1P19812 1950 aa1.75□□□□□ -2.13
NUP100YKL068W URA5P13298 226 aaKnown RBP1.74□□□□□ -2.13
NUP100YKL068W RNP1P32385 249 aa1.74□□□□□ -2.13
NUP100YKL068W ASP1P38986 381 aaPredicted RBP1.74□□□□□ -2.13
NUP100YKL068W SBH1P52870 82 aa1.74□□□□□ -2.13
NUP100YKL068W YNL033WP53964 284 aa1.74□□□□□ -2.13
NUP100YKL068W YNL019CP53975 284 aa1.74□□□□□ -2.13
NUP100YKL068W YKR005CQ02203 525 aa1.74□□□□□ -2.13
NUP100YKL068W YML122CQ03207 126 aa1.74□□□□□ -2.13
NUP100YKL068W DML1Q03652 475 aa1.74□□□□□ -2.13
NUP100YKL068W YMR321CQ04898 105 aa1.74□□□□□ -2.13
NUP100YKL068W IRC25Q07951 179 aa1.74□□□□□ -2.13
NUP100YKL068W ATO3Q12359 275 aa1.74□□□□□ -2.13
NUP100YKL068W GPA2P10823 449 aa1.74□□□□□ -2.13
NUP100YKL068W VMA11P32842 164 aa1.74□□□□□ -2.13
NUP100YKL068W FYV4P38783 130 aaPredicted RBP1.74□□□□□ -2.13
NUP100YKL068W RRT13P40042 185 aa1.74□□□□□ -2.13
NUP100YKL068W YDR274CP87283 123 aa1.74□□□□□ -2.13
NUP100YKL068W EST3Q03096 181 aa1.74□□□□□ -2.13
NUP100YKL068W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
NUP100YKL068W YEL009C-AA0A023PZF2 135 aa1.73□□□□□ -2.13
NUP100YKL068W HAP2P06774 265 aa1.73□□□□□ -2.13
NUP100YKL068W NSP1P14907 823 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W PCL1P24867 279 aa1.73□□□□□ -2.13
NUP100YKL068W ASK1P35734 292 aa1.73□□□□□ -2.13
NUP100YKL068W YRA2P36036 203 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
NUP100YKL068W RPL14AP36105 138 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W COS8P38723 381 aa1.73□□□□□ -2.13
NUP100YKL068W RPL14BP38754 138 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W HTD2P38790 280 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W YIL054WP40524 105 aa1.73□□□□□ -2.13
NUP100YKL068W MIC19P43594 170 aa1.73□□□□□ -2.13
NUP100YKL068W PAC10P48363 199 aa1.73□□□□□ -2.13
NUP100YKL068W YLR412C-AQ3E742 68 aa1.73□□□□□ -2.13
NUP100YKL068W ADH3P07246 375 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W AHT1P29589 182 aa1.73□□□□□ -2.13
NUP100YKL068W YNL200CP40165 246 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W GAT4P40569 121 aa1.73□□□□□ -2.13
NUP100YKL068W TVP15Q03860 143 aa1.73□□□□□ -2.13
NUP100YKL068W GAL83Q04739 417 aa1.73□□□□□ -2.13
NUP100YKL068W SRL1Q08673 210 aa1.73□□□□□ -2.13
NUP100YKL068W SMT3Q12306 101 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W TIM9O74700 87 aa1.73□□□□□ -2.13
NUP100YKL068W YBL059WP34224 193 aa1.73□□□□□ -2.13
NUP100YKL068W SHB17P36136 271 aaKnown RBP1.73□□□□□ -2.13
NUP100YKL068W YBR242WP38331 238 aa1.73□□□□□ -2.13
NUP100YKL068W YGL230CP53074 147 aa1.73□□□□□ -2.13
NUP100YKL068W ZEO1Q08245 113 aa1.73□□□□□ -2.13
NUP100YKL068W YKL068W-AQ3E826 78 aa1.73□□□□□ -2.13
NUP100YKL068W VAR1P02381 398 aa1.72□□□□□ -2.13
NUP100YKL068W CBP6P07253 162 aaPredicted RBP1.72□□□□□ -2.13
NUP100YKL068W YAE1P47118 141 aaPredicted RBP1.72□□□□□ -2.13
NUP100YKL068W SCW4P53334 386 aaKnown RBP1.72□□□□□ -2.13
NUP100YKL068W OCA6Q12454 224 aa1.72□□□□□ -2.13
NUP100YKL068W HUT1Q12520 339 aa1.72□□□□□ -2.13
NUP100YKL068W YAR023CD6VPM8 179 aa1.72□□□□□ -2.13
NUP100YKL068W COX10P21592 462 aa1.72□□□□□ -2.13
NUP100YKL068W TOM40P23644 387 aaKnown RBP1.72□□□□□ -2.13
NUP100YKL068W GPI18P38211 433 aa1.72□□□□□ -2.13
NUP100YKL068W YEL028WP39989 153 aa1.72□□□□□ -2.13
NUP100YKL068W YLR281CQ05863 155 aa1.72□□□□□ -2.13
NUP100YKL068W ISD11Q6Q560 94 aa1.72□□□□□ -2.13
NUP100YKL068W SGA1P08019 549 aa1.71□□□□□ -2.14
NUP100YKL068W MRS4P23500 304 aa1.71□□□□□ -2.14
NUP100YKL068W YPT31P38555 223 aaKnown RBP1.71□□□□□ -2.14
NUP100YKL068W YHR125WP38831 101 aa1.71□□□□□ -2.14
NUP100YKL068W YER134CP40081 178 aa1.71□□□□□ -2.14
NUP100YKL068W SPG3Q04398 127 aaPredicted RBP1.71□□□□□ -2.14
NUP100YKL068W RNH202Q05635 350 aa1.71□□□□□ -2.14
NUP100YKL068W RPL9AP05738 191 aaKnown RBP1.71□□□□□ -2.14
NUP100YKL068W RAD10P06838 210 aa1.71□□□□□ -2.14
NUP100YKL068W YHR032W-AP0C5N6 59 aa1.71□□□□□ -2.14
NUP100YKL068W RPL9BP51401 191 aaKnown RBP1.71□□□□□ -2.14
NUP100YKL068W EMC4P53073 190 aa1.71□□□□□ -2.14
NUP100YKL068W VPS28Q02767 242 aa1.71□□□□□ -2.14
NUP100YKL068W KTI11Q3E840 82 aa1.71□□□□□ -2.14
NUP100YKL068W SPS2P08459 502 aa1.7□□□□□ -2.14
NUP100YKL068W HSP12P22943 109 aaKnown RBP1.7□□□□□ -2.14
NUP100YKL068W SWD3P38123 315 aa1.7□□□□□ -2.14
NUP100YKL068W SFT2P38166 215 aa1.7□□□□□ -2.14
NUP100YKL068W CTR2P38865 189 aa1.7□□□□□ -2.14
NUP100YKL068W AIM18P38884 321 aa1.7□□□□□ -2.14
NUP100YKL068W ARC15P40518 154 aaRIP-Chip data1.7□□□□□ -2.14not detected
NUP100YKL068W REE1P40893 198 aa1.7□□□□□ -2.14
NUP100YKL068W ANT1Q06497 328 aa1.7□□□□□ -2.14
NUP100YKL068W SYM1Q06563 197 aa1.7□□□□□ -2.14
NUP100YKL068W YLR042CQ07990 161 aa1.7□□□□□ -2.14
NUP100YKL068W RAD6P06104 172 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms