RNA–Protein interactions for RNA: YJL072C

PSF2, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF2	YJL072C	ECM31	P38122	312 aa		0.93	□□□□□ -2.26
PSF2	YJL072C	IPT1	P38954	527 aa		0.93	□□□□□ -2.26
PSF2	YJL072C	HHY1	P39982	102 aa		0.92	□□□□□ -2.26
PSF2	YJL072C	RCF2	P53721	224 aa		0.92	□□□□□ -2.26
PSF2	YJL072C	YNL122C	P53921	115 aa	Predicted RBP	0.92	□□□□□ -2.26
PSF2	YJL072C	IRC19	Q07843	230 aa		0.92	□□□□□ -2.26
PSF2	YJL072C	CDC39	P25655	2108 aa	Known RBP	0.91	□□□□□ -2.26
PSF2	YJL072C	RPS28B	P0C0X0	67 aa	Known RBP	0.91	□□□□□ -2.26
PSF2	YJL072C	YGL041W-A	P0C5N3	154 aa		0.91	□□□□□ -2.26
PSF2	YJL072C	HYP2	P23301	157 aa	Known RBP	0.91	□□□□□ -2.26
PSF2	YJL072C	PEX34	P25584	144 aa		0.91	□□□□□ -2.26
PSF2	YJL072C	SRP21	P32342	167 aa		0.91	□□□□□ -2.26
PSF2	YJL072C	ATG8	P38182	117 aa	RIP-Chip data	0.91	□□□□□ -2.26	not detected
PSF2	YJL072C	AME1	P38313	324 aa		0.91	□□□□□ -2.26
PSF2	YJL072C	RFU1	Q08003	200 aa		0.91	□□□□□ -2.26
PSF2	YJL072C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.91	□□□□□ -2.26
PSF2	YJL072C	YHR213W-B	Q8TGK1	99 aa		0.91	□□□□□ -2.26
PSF2	YJL072C	NSL1	Q12143	216 aa		0.9	□□□□□ -2.27
PSF2	YJL072C	ROM2	P51862	1356 aa	Known RBP	0.9	□□□□□ -2.27
PSF2	YJL072C	PRP8	P33334	2413 aa	Known RBP	0.9	□□□□□ -2.27
PSF2	YJL072C	YER181C	P40097	107 aa		0.89	□□□□□ -2.27
PSF2	YJL072C	YPD1	Q07688	167 aa		0.89	□□□□□ -2.27
PSF2	YJL072C	PBI2	P0CT04	75 aa	Known RBP	0.88	□□□□□ -2.27
PSF2	YJL072C	PHO13	P19881	312 aa		0.88	□□□□□ -2.27
PSF2	YJL072C	BUB2	P26448	306 aa	Predicted RBP	0.88	□□□□□ -2.27
PSF2	YJL072C	RME1	P32338	300 aa	Known RBP	0.88	□□□□□ -2.27
PSF2	YJL072C	DER1	P38307	211 aa		0.88	□□□□□ -2.27
PSF2	YJL072C	YJL218W	P40892	196 aa	Known RBP	0.88	□□□□□ -2.27
PSF2	YJL072C	EFG1	Q3E705	233 aa	Known RBP	0.88	□□□□□ -2.27
PSF2	YJL072C	HAP2	P06774	265 aa		0.87	□□□□□ -2.27
PSF2	YJL072C	MRPL24	P36525	258 aa	Predicted RBP	0.87	□□□□□ -2.27
PSF2	YJL072C	MGR2	Q02889	113 aa		0.87	□□□□□ -2.27
PSF2	YJL072C	SED1	Q01589	338 aa		0.86	□□□□□ -2.27
PSF2	YJL072C	YPR153W	Q06537	140 aa		0.86	□□□□□ -2.27
PSF2	YJL072C	GPI11	Q06636	219 aa		0.86	□□□□□ -2.27
PSF2	YJL072C	YOR072W	Q08486	104 aa		0.86	□□□□□ -2.27
PSF2	YJL072C	RIB3	Q99258	208 aa		0.86	□□□□□ -2.27
PSF2	YJL072C	SEN15	Q04675	128 aa		0.85	□□□□□ -2.27
PSF2	YJL072C	RRT7	Q07829	113 aa		0.85	□□□□□ -2.27
PSF2	YJL072C	RPS22A	P0C0W1	130 aa	Known RBP	0.84	□□□□□ -2.27
PSF2	YJL072C	DDR48	P18899	430 aa	Known RBP	0.84	□□□□□ -2.27
PSF2	YJL072C	ATP19	P81451	68 aa		0.84	□□□□□ -2.27
PSF2	YJL072C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.84	□□□□□ -2.27
PSF2	YJL072C	SCS22	Q6Q595	175 aa		0.84	□□□□□ -2.27
PSF2	YJL072C	HSL1	P34244	1518 aa		0.84	□□□□□ -2.28
PSF2	YJL072C	RPL33A	P05744	107 aa	Known RBP	0.83	□□□□□ -2.28
PSF2	YJL072C	GPI2	P46961	280 aa		0.83	□□□□□ -2.28
PSF2	YJL072C	TLG1	Q03322	224 aa		0.83	□□□□□ -2.28
PSF2	YJL072C	UBR1	P19812	1950 aa		0.82	□□□□□ -2.28
PSF2	YJL072C	NHP6A	P11632	93 aa	Known RBP	0.81	□□□□□ -2.28
PSF2	YJL072C	DIE2	P50076	525 aa		0.81	□□□□□ -2.28
PSF2	YJL072C	VMA10	P48836	114 aa	Known RBP	0.79	□□□□□ -2.28
PSF2	YJL072C	EST3	Q03096	181 aa		0.79	□□□□□ -2.28
PSF2	YJL072C	COX5B	P00425	151 aa		0.78	□□□□□ -2.28
PSF2	YJL072C	FIG1	P38224	298 aa		0.78	□□□□□ -2.28
PSF2	YJL072C	PRM3	Q08931	133 aa		0.78	□□□□□ -2.28
PSF2	YJL072C	YGL014C-A	P0C5N1	53 aa		0.77	□□□□□ -2.29
PSF2	YJL072C	YMR141C	P40211	102 aa		0.77	□□□□□ -2.29
PSF2	YJL072C	MHF1	Q3E835	90 aa		0.77	□□□□□ -2.29
PSF2	YJL072C	HSP12	P22943	109 aa	Known RBP	0.76	□□□□□ -2.29
PSF2	YJL072C	IRC21	Q04772	201 aa		0.76	□□□□□ -2.29
PSF2	YJL072C	PET20	Q99373	253 aa		0.76	□□□□□ -2.29
PSF2	YJL072C	SRL3	P36167	246 aa		0.75	□□□□□ -2.29
PSF2	YJL072C	YJL009W	P47078	108 aa		0.75	□□□□□ -2.29
PSF2	YJL072C	YMR122C	Q03879	124 aa		0.75	□□□□□ -2.29
PSF2	YJL072C	FYV5	P25585	152 aa		0.74	□□□□□ -2.29
PSF2	YJL072C	YCL001W-A	P87012	153 aa		0.74	□□□□□ -2.29
PSF2	YJL072C	HUT1	Q12520	339 aa		0.74	□□□□□ -2.29
PSF2	YJL072C	RPL43A	P0CX25	92 aa	Known RBP	0.72	□□□□□ -2.29
PSF2	YJL072C	RPL43B	P0CX26	92 aa		0.72	□□□□□ -2.29
PSF2	YJL072C	RPS1B	P23248	255 aa	Known RBP	0.72	□□□□□ -2.29
PSF2	YJL072C	YHR140W	P38842	239 aa		0.72	□□□□□ -2.29
PSF2	YJL072C	YNL019C	P53975	284 aa		0.72	□□□□□ -2.29
PSF2	YJL072C	RAV2	Q03956	351 aa		0.72	□□□□□ -2.29
PSF2	YJL072C	LST8	P41318	303 aa		0.71	□□□□□ -2.3
PSF2	YJL072C	YGR201C	P42936	225 aa		0.71	□□□□□ -2.3
PSF2	YJL072C	SOM1	Q05676	74 aa		0.71	□□□□□ -2.3
PSF2	YJL072C	SMD2	Q06217	110 aa	Known RBP	0.71	□□□□□ -2.3
PSF2	YJL072C	IPI1	P38803	334 aa	Predicted RBP	0.7	□□□□□ -2.3
PSF2	YJL072C	PHB1	P40961	287 aa		0.7	□□□□□ -2.3
PSF2	YJL072C	PKR1	Q03880	122 aa	Known RBP	0.7	□□□□□ -2.3
PSF2	YJL072C	YLR307C-A	Q3E825	87 aa		0.69	□□□□□ -2.3
PSF2	YJL072C	PET54	P10834	293 aa		0.68	□□□□□ -2.3
PSF2	YJL072C	MVB12	P42939	101 aa		0.68	□□□□□ -2.3
PSF2	YJL072C	DDP1	Q99321	188 aa	Known RBP	0.68	□□□□□ -2.3
PSF2	YJL072C	NMT1	P14743	455 aa		0.67	□□□□□ -2.3
PSF2	YJL072C	COA4	Q05809	96 aa		0.67	□□□□□ -2.3
PSF2	YJL072C	RAF1	Q06891	181 aa		0.67	□□□□□ -2.3
PSF2	YJL072C	YLR157W-E	P0CF00	54 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	YHR213W	P0CI67	198 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	SUI1	P32911	108 aa	Known RBP	0.66	□□□□□ -2.3
PSF2	YJL072C	LSM1	P47017	172 aa	Known RBP	0.66	□□□□□ -2.3
PSF2	YJL072C	MOG1	P47123	218 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	YMR320W	Q04897	101 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	NAT5	Q08689	176 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	KTI11	Q3E840	82 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	COA6	Q3E846	104 aa		0.66	□□□□□ -2.3
PSF2	YJL072C	LAA1	P39526	2014 aa		0.65	□□□□□ -2.3
PSF2	YJL072C	RPL40A	P0CH08	128 aa	Known RBP	0.65	□□□□□ -2.31
PSF2	YJL072C	RPL40B	P0CH09	128 aa	Known RBP	0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms