RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YGL193CP53097 103 aa2.71□□□□□ -1.98
YIR040CYIR040C SDS23P53172 527 aa2.71□□□□□ -1.98
YIR040CYIR040C SPR6Q01684 191 aa2.71□□□□□ -1.98
YIR040CYIR040C YDL057WQ07379 328 aa2.71□□□□□ -1.98
YIR040CYIR040C YLR012CQ07927 99 aa2.71□□□□□ -1.98
YIR040CYIR040C IRC25Q07951 179 aa2.71□□□□□ -1.98
YIR040CYIR040C YOL160WQ08321 113 aa2.71□□□□□ -1.98
YIR040CYIR040C YIL102C-AQ2V2P5 75 aa2.71□□□□□ -1.98
YIR040CYIR040C BCK1Q01389 1478 aa2.71□□□□□ -1.98
YIR040CYIR040C TY3B-IQ7LHG5 1498 aaKnown RBP2.71□□□□□ -1.98
YIR040CYIR040C MSB2P32334 1306 aa2.7□□□□□ -1.98
YIR040CYIR040C USO1P25386 1790 aa2.7□□□□□ -1.98
YIR040CYIR040C YIL177CP40434 1758 aa2.7□□□□□ -1.98
YIR040CYIR040C YJL225CP40889 1758 aa2.7□□□□□ -1.98
YIR040CYIR040C TY1B-BRQ12193 1756 aa2.7□□□□□ -1.98
YIR040CYIR040C TY1B-GR3Q12316 1755 aa2.7□□□□□ -1.98
YIR040CYIR040C TY1B-ORQ92393 1755 aa2.7□□□□□ -1.98
YIR040CYIR040C UBC4P15731 148 aa2.7□□□□□ -1.98
YIR040CYIR040C HSP12P22943 109 aaKnown RBP2.7□□□□□ -1.98
YIR040CYIR040C AHT1P29589 182 aa2.7□□□□□ -1.98
YIR040CYIR040C RPB7P34087 171 aa2.7□□□□□ -1.98
YIR040CYIR040C ASK1P35734 292 aa2.7□□□□□ -1.98
YIR040CYIR040C PAM17P36147 197 aa2.7□□□□□ -1.98
YIR040CYIR040C ECM34P38728 170 aa2.7□□□□□ -1.98
YIR040CYIR040C YAR029WP39549 74 aa2.7□□□□□ -1.98
YIR040CYIR040C NSA2P40078 261 aaKnown RBP2.7□□□□□ -1.98
YIR040CYIR040C MPM1P40364 252 aa2.7□□□□□ -1.98
YIR040CYIR040C GAT4P40569 121 aa2.7□□□□□ -1.98
YIR040CYIR040C TOS8P53147 276 aa2.7□□□□□ -1.98
YIR040CYIR040C YGR050CP53231 118 aa2.7□□□□□ -1.98
YIR040CYIR040C YNL234WP53857 426 aa2.7□□□□□ -1.98
YIR040CYIR040C RPL15BP54780 204 aaPredicted RBP2.7□□□□□ -1.98
YIR040CYIR040C EST3Q03096 181 aa2.7□□□□□ -1.98
YIR040CYIR040C MCH4Q08268 501 aa2.7□□□□□ -1.98
YIR040CYIR040C YLR363W-AQ3E747 85 aa2.7□□□□□ -1.98
YIR040CYIR040C YBL112CQ3E7Y4 105 aa2.7□□□□□ -1.98
YIR040CYIR040C MHF1Q3E835 90 aa2.7□□□□□ -1.98
YIR040CYIR040C TY1B-JR2P47100 1755 aaKnown RBP2.69□□□□□ -1.98
YIR040CYIR040C TY1B-ER2Q03619 1755 aa2.69□□□□□ -1.98
YIR040CYIR040C TY1B-MR1Q04214 1755 aa2.69□□□□□ -1.98
YIR040CYIR040C TY1B-MR2Q04670 1755 aaKnown RBP2.69□□□□□ -1.98
YIR040CYIR040C TY1B-LR1Q12088 1755 aaKnown RBP2.69□□□□□ -1.98
YIR040CYIR040C TY1B-NL1Q12112 1755 aa2.69□□□□□ -1.98
YIR040CYIR040C TY1B-GR1Q12141 1755 aa2.69□□□□□ -1.98
YIR040CYIR040C TY1B-BLQ12490 1755 aa2.69□□□□□ -1.98
YIR040CYIR040C MRS4P23500 304 aa2.69□□□□□ -1.98
YIR040CYIR040C MIG1P27705 504 aa2.69□□□□□ -1.98
YIR040CYIR040C PAU16P35994 123 aa2.69□□□□□ -1.98
YIR040CYIR040C RIM2P38127 377 aa2.69□□□□□ -1.98
YIR040CYIR040C SHE1P38200 338 aa2.69□□□□□ -1.98
YIR040CYIR040C FYV4P38783 130 aaPredicted RBP2.69□□□□□ -1.98
YIR040CYIR040C SVP26P38869 228 aa2.69□□□□□ -1.98
YIR040CYIR040C SNF11P38956 169 aa2.69□□□□□ -1.98
YIR040CYIR040C POP3P53833 195 aaPredicted RBP2.69□□□□□ -1.98
YIR040CYIR040C SWS2P53937 143 aa2.69□□□□□ -1.98
YIR040CYIR040C PET191Q02772 108 aa2.69□□□□□ -1.98
YIR040CYIR040C NMA1Q06178 401 aaKnown RBP2.69□□□□□ -1.98
YIR040CYIR040C YOR292CQ08743 309 aa2.69□□□□□ -1.98
YIR040CYIR040C YDL157CQ12082 118 aa2.69□□□□□ -1.98
YIR040CYIR040C Q0255P03881 472 aa2.68□□□□□ -1.98
YIR040CYIR040C YCR050CP25630 102 aa2.68□□□□□ -1.98
YIR040CYIR040C MRPS9P38120 278 aa2.68□□□□□ -1.98
YIR040CYIR040C SMP1P38128 452 aa2.68□□□□□ -1.98
YIR040CYIR040C HSP10P38910 106 aa2.68□□□□□ -1.98
YIR040CYIR040C YNL198CP40166 100 aa2.68□□□□□ -1.98
YIR040CYIR040C EMC5P40540 141 aa2.68□□□□□ -1.98
YIR040CYIR040C CDC1P40986 491 aa2.68□□□□□ -1.98
YIR040CYIR040C TOS2P50078 622 aa2.68□□□□□ -1.98
YIR040CYIR040C KNH1P50112 268 aa2.68□□□□□ -1.98
YIR040CYIR040C COX12Q01519 83 aa2.68□□□□□ -1.98
YIR040CYIR040C MIX14Q04341 121 aa2.68□□□□□ -1.98
YIR040CYIR040C GAT3Q07928 141 aa2.68□□□□□ -1.98
YIR040CYIR040C NDD1Q08887 554 aa2.68□□□□□ -1.98
YIR040CYIR040C YFL041W-AQ3E817 63 aa2.68□□□□□ -1.98
YIR040CYIR040C ATG40Q99325 256 aa2.68□□□□□ -1.98
YIR040CYIR040C YMR316C-AI2HB70 103 aa2.67□□□□□ -1.98
YIR040CYIR040C NHP2P32495 156 aaPredicted RBP2.67□□□□□ -1.98
YIR040CYIR040C SWD3P38123 315 aa2.67□□□□□ -1.98
YIR040CYIR040C GPI18P38211 433 aa2.67□□□□□ -1.98
YIR040CYIR040C YHL042WP38729 150 aa2.67□□□□□ -1.98
YIR040CYIR040C PEP8P40335 379 aa2.67□□□□□ -1.98
YIR040CYIR040C PAU5P43575 122 aa2.67□□□□□ -1.98
YIR040CYIR040C DSK2P48510 373 aa2.67□□□□□ -1.98
YIR040CYIR040C SMD1Q02260 146 aaPredicted RBP2.67□□□□□ -1.98
YIR040CYIR040C GPI19Q04082 140 aa2.67□□□□□ -1.98
YIR040CYIR040C RRT7Q07829 113 aa2.67□□□□□ -1.98
YIR040CYIR040C HRT1Q08273 121 aa2.67□□□□□ -1.98
YIR040CYIR040C YOR385WQ08909 290 aa2.67□□□□□ -1.98
YIR040CYIR040C YHR214C-EQ8TGK0 99 aa2.67□□□□□ -1.98
YIR040CYIR040C TY1B-NL2Q99337 1749 aaKnown RBP2.67□□□□□ -1.98
YIR040CYIR040C DNF1P32660 1571 aa2.66□□□□□ -1.98
YIR040CYIR040C RPL40AP0CH08 128 aaKnown RBP2.66□□□□□ -1.98
YIR040CYIR040C RPL40BP0CH09 128 aaKnown RBP2.66□□□□□ -1.98
YIR040CYIR040C MDH2P22133 377 aa2.66□□□□□ -1.98
YIR040CYIR040C CSH1P38287 376 aa2.66□□□□□ -1.98
YIR040CYIR040C HTD2P38790 280 aaKnown RBP2.66□□□□□ -1.98
YIR040CYIR040C GGC1P38988 300 aa2.66□□□□□ -1.98
YIR040CYIR040C TIM17P39515 158 aa2.66□□□□□ -1.98
YIR040CYIR040C YER134CP40081 178 aa2.66□□□□□ -1.98
YIR040CYIR040C WWM1P43582 211 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms