RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W XPT1P47165 209 aa0.02□□□□□ -2.41
CUL3YGR003W YET3Q07451 203 aa0.02□□□□□ -2.41
CUL3YGR003W YGL014C-AP0C5N1 53 aa0.01□□□□□ -2.41
CUL3YGR003W SLM6P38343 150 aa0.01□□□□□ -2.41
CUL3YGR003W SEC72P39742 193 aaKnown RBP0.01□□□□□ -2.41
CUL3YGR003W YJL218WP40892 196 aaKnown RBP0.01□□□□□ -2.41
CUL3YGR003W YCL001W-AP87012 153 aa0.01□□□□□ -2.41
CUL3YGR003W IRC19Q07843 230 aa0.01□□□□□ -2.41
CUL3YGR003W YLR050CQ12155 161 aaKnown RBP0.01□□□□□ -2.41
CUL3YGR003W RPL33AP05744 107 aaKnown RBP0.01□□□□□ -2.41
CUL3YGR003W DDR48P18899 430 aaKnown RBP0.01□□□□□ -2.41
CUL3YGR003W FIG1P38224 298 aa0.01□□□□□ -2.41
CUL3YGR003W YHR140WP38842 239 aa0.01□□□□□ -2.41
CUL3YGR003W SRP14P38985 146 aa0.01□□□□□ -2.41
CUL3YGR003W MVB12P42939 101 aa0.01□□□□□ -2.41
CUL3YGR003W YPR202WQ08993 238 aa0.01□□□□□ -2.41
CUL3YGR003W ADE6P38972 1358 aaKnown RBP0.01□□□□□ -2.41
CUL3YGR003W ATP5P09457 212 aa0□□□□□ -2.41
CUL3YGR003W RPS22AP0C0W1 130 aaKnown RBP0□□□□□ -2.41
CUL3YGR003W RPL40AP0CH08 128 aaKnown RBP0□□□□□ -2.41
CUL3YGR003W RPL40BP0CH09 128 aaKnown RBP0□□□□□ -2.41
CUL3YGR003W SPA2P23201 1466 aaKnown RBP0□□□□□ -2.41
CUL3YGR003W RPS22BQ3E7Y3 130 aaKnown RBP0□□□□□ -2.41
CUL3YGR003W HAP2P06774 265 aa-0.01□□□□□ -2.41
CUL3YGR003W HTD2P38790 280 aaKnown RBP-0.01□□□□□ -2.41
CUL3YGR003W FMN1Q03778 218 aa-0.01□□□□□ -2.41
CUL3YGR003W NMA1Q06178 401 aaKnown RBP-0.01□□□□□ -2.41
CUL3YGR003W RFU1Q08003 200 aa-0.01□□□□□ -2.41
CUL3YGR003W YLR046CQ12253 270 aa-0.01□□□□□ -2.41
CUL3YGR003W RDI1Q12434 202 aa-0.01□□□□□ -2.41
CUL3YGR003W SCS22Q6Q595 175 aa-0.01□□□□□ -2.41
CUL3YGR003W RPL30P14120 105 aaKnown RBP-0.01□□□□□ -2.41
CUL3YGR003W PEX34P25584 144 aa-0.01□□□□□ -2.41
CUL3YGR003W AUA1P32450 94 aa-0.01□□□□□ -2.41
CUL3YGR003W YGL101WP53144 215 aa-0.01□□□□□ -2.41
CUL3YGR003W RCF2P53721 224 aa-0.01□□□□□ -2.41
CUL3YGR003W YOR034C-AQ3E735 80 aa-0.01□□□□□ -2.41
CUL3YGR003W HUG1Q6Q5K6 68 aa-0.01□□□□□ -2.41
CUL3YGR003W ECM31P38122 312 aa-0.02□□□□□ -2.41
CUL3YGR003W TRS20P38334 175 aa-0.02□□□□□ -2.41
CUL3YGR003W YER181CP40097 107 aa-0.02□□□□□ -2.41
CUL3YGR003W GPI11Q06636 219 aa-0.02□□□□□ -2.41
CUL3YGR003W MHF1Q3E835 90 aa-0.02□□□□□ -2.41
CUL3YGR003W CHD1P32657 1468 aa-0.02□□□□□ -2.41
CUL3YGR003W CMD1P06787 147 aaKnown RBP-0.02□□□□□ -2.41
CUL3YGR003W PHO13P19881 312 aa-0.02□□□□□ -2.41
CUL3YGR003W FYV5P25585 152 aa-0.02□□□□□ -2.41
CUL3YGR003W RME1P32338 300 aaKnown RBP-0.02□□□□□ -2.41
CUL3YGR003W UTP11P34247 250 aaPredicted RBP-0.02□□□□□ -2.41
CUL3YGR003W EGD2P38879 174 aaKnown RBP-0.02□□□□□ -2.41
CUL3YGR003W GIM3P53900 129 aa-0.02□□□□□ -2.41
CUL3YGR003W LSM3P57743 89 aaKnown RBP-0.02□□□□□ -2.41
CUL3YGR003W GIM5Q04493 163 aa-0.02□□□□□ -2.41
CUL3YGR003W RTC6O14464 93 aa-0.03□□□□□ -2.41
CUL3YGR003W SRP102P36057 244 aaPredicted RBP-0.03□□□□□ -2.41
CUL3YGR003W MRPL24P36525 258 aaPredicted RBP-0.03□□□□□ -2.41
CUL3YGR003W YBR013CP38215 129 aa-0.03□□□□□ -2.41
CUL3YGR003W YGR201CP42936 225 aa-0.03□□□□□ -2.41
CUL3YGR003W FAS2P19097 1887 aaKnown RBP-0.03□□□□□ -2.41
CUL3YGR003W HYP2P23301 157 aaKnown RBP-0.03□□□□□ -2.41
CUL3YGR003W DLS1P40366 167 aa-0.03□□□□□ -2.41
CUL3YGR003W APQ12P40532 138 aa-0.03□□□□□ -2.41
CUL3YGR003W MIC27P50945 234 aa-0.03□□□□□ -2.41
CUL3YGR003W YGL193CP53097 103 aa-0.03□□□□□ -2.41
CUL3YGR003W YOR072WQ08486 104 aa-0.03□□□□□ -2.41
CUL3YGR003W RPS1BP23248 255 aaKnown RBP-0.04□□□□□ -2.42
CUL3YGR003W YMR122CQ03879 124 aa-0.04□□□□□ -2.42
CUL3YGR003W PLP1Q04004 230 aa-0.04□□□□□ -2.42
CUL3YGR003W YMR321CQ04898 105 aa-0.04□□□□□ -2.42
CUL3YGR003W TY1B-HO13535 1793 aa-0.05□□□□□ -2.42
CUL3YGR003W MYO1P08964 1928 aa-0.05□□□□□ -2.42
CUL3YGR003W NHP6AP11632 93 aaKnown RBP-0.05□□□□□ -2.42
CUL3YGR003W EMC4P53073 190 aa-0.05□□□□□ -2.42
CUL3YGR003W EST3Q03096 181 aa-0.05□□□□□ -2.42
CUL3YGR003W COA4Q05809 96 aa-0.05□□□□□ -2.42
CUL3YGR003W YPR153WQ06537 140 aa-0.05□□□□□ -2.42
CUL3YGR003W FIT3Q08907 204 aa-0.05□□□□□ -2.42
CUL3YGR003W NMT1P14743 455 aa-0.05□□□□□ -2.42
CUL3YGR003W BUB2P26448 306 aaPredicted RBP-0.05□□□□□ -2.42
CUL3YGR003W PHB1P40961 287 aa-0.05□□□□□ -2.42
CUL3YGR003W YGL149WP53116 101 aa-0.05□□□□□ -2.42
CUL3YGR003W YMR320WQ04897 101 aa-0.05□□□□□ -2.42
CUL3YGR003W ATG38Q05789 226 aaKnown RBP-0.05□□□□□ -2.42
CUL3YGR003W YOR385WQ08909 290 aa-0.05□□□□□ -2.42
CUL3YGR003W EFG1Q3E705 233 aaKnown RBP-0.05□□□□□ -2.42
CUL3YGR003W TY4B-JP47024 1803 aa-0.05□□□□□ -2.42
CUL3YGR003W FUN14P18411 198 aa-0.06□□□□□ -2.42
CUL3YGR003W SUA7P29055 345 aaPredicted RBP-0.06□□□□□ -2.42
CUL3YGR003W RPS1AP33442 255 aaKnown RBP-0.06□□□□□ -2.42
CUL3YGR003W LST8P41318 303 aa-0.06□□□□□ -2.42
CUL3YGR003W YFR035CP43608 114 aa-0.06□□□□□ -2.42
CUL3YGR003W TMA20P89886 181 aaPredicted RBP-0.06□□□□□ -2.42
CUL3YGR003W SEC7P11075 2009 aaKnown RBP-0.06□□□□□ -2.42
CUL3YGR003W YPR117WQ06116 2489 aa-0.06□□□□□ -2.42
CUL3YGR003W YSF3P0C074 85 aaPredicted RBP-0.06□□□□□ -2.42
CUL3YGR003W YGL041W-AP0C5N3 154 aa-0.06□□□□□ -2.42
CUL3YGR003W AME1P38313 324 aa-0.06□□□□□ -2.42
CUL3YGR003W YPL067CQ02754 198 aa-0.06□□□□□ -2.42
CUL3YGR003W SOM1Q05676 74 aa-0.06□□□□□ -2.42
CUL3YGR003W YHR213WP0CI67 198 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms