RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YMR310CQ04867 317 aaPredicted RBP0.81□□□□□ -2.28
SMC1YFL008W INM2Q05533 292 aa0.81□□□□□ -2.28
SMC1YFL008W NAT3Q06504 195 aa0.81□□□□□ -2.28
SMC1YFL008W YLR118CQ12354 227 aa0.81□□□□□ -2.28
SMC1YFL008W YNR034W-AQ3E841 98 aa0.81□□□□□ -2.28
SMC1YFL008W HIS1P00498 297 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W RPS28BP0C0X0 67 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W ASP3-2P0CX77 362 aa0.8□□□□□ -2.28
SMC1YFL008W ASP3-3P0CX78 362 aa0.8□□□□□ -2.28
SMC1YFL008W ASP3-4P0CX79 362 aa0.8□□□□□ -2.28
SMC1YFL008W ASP3-1P0CZ17 362 aa0.8□□□□□ -2.28
SMC1YFL008W DPM1P14020 267 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W CPT1P17898 393 aa0.8□□□□□ -2.28
SMC1YFL008W YSR3P23501 404 aa0.8□□□□□ -2.28
SMC1YFL008W PEX4P29340 183 aa0.8□□□□□ -2.28
SMC1YFL008W LDB7P38210 180 aa0.8□□□□□ -2.28
SMC1YFL008W YHR130CP38834 111 aa0.8□□□□□ -2.28
SMC1YFL008W CTR2P38865 189 aa0.8□□□□□ -2.28
SMC1YFL008W YEA4P40004 342 aa0.8□□□□□ -2.28
SMC1YFL008W CYB5P40312 120 aa0.8□□□□□ -2.28
SMC1YFL008W YIL059CP40520 121 aa0.8□□□□□ -2.28
SMC1YFL008W APQ12P40532 138 aa0.8□□□□□ -2.28
SMC1YFL008W YJR146WP47174 117 aa0.8□□□□□ -2.28
SMC1YFL008W BRR6P53062 197 aa0.8□□□□□ -2.28
SMC1YFL008W PRM8P53174 237 aa0.8□□□□□ -2.28
SMC1YFL008W FMP48P53233 369 aa0.8□□□□□ -2.28
SMC1YFL008W YMR321CQ04898 105 aa0.8□□□□□ -2.28
SMC1YFL008W YLR030WQ07967 263 aa0.8□□□□□ -2.28
SMC1YFL008W SAM4Q08985 325 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W VPS68Q12016 184 aa0.8□□□□□ -2.28
SMC1YFL008W YPL162CQ12042 273 aa0.8□□□□□ -2.28
SMC1YFL008W SMT3Q12306 101 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W PRR2Q12310 699 aa0.8□□□□□ -2.28
SMC1YFL008W YLR361C-AQ3E795 98 aa0.8□□□□□ -2.28
SMC1YFL008W COA3Q3E7B2 85 aa0.8□□□□□ -2.28
SMC1YFL008W RPS28AQ3E7X9 67 aaPredicted RBP0.8□□□□□ -2.28
SMC1YFL008W MDM35O60200 86 aa0.8□□□□□ -2.28
SMC1YFL008W CDC36P06100 191 aaPredicted RBP0.8□□□□□ -2.28
SMC1YFL008W YLL053CP0CD98 152 aa0.8□□□□□ -2.28
SMC1YFL008W PAU1P0CE88 120 aa0.8□□□□□ -2.28
SMC1YFL008W PAU14P0CE89 120 aa0.8□□□□□ -2.28
SMC1YFL008W PAU6P0CE90 120 aa0.8□□□□□ -2.28
SMC1YFL008W PAU18P0CE91 120 aa0.8□□□□□ -2.28
SMC1YFL008W PAU8P0CE92 120 aa0.8□□□□□ -2.28
SMC1YFL008W PAU11P0CE93 120 aa0.8□□□□□ -2.28
SMC1YFL008W DDI2P0CH63 225 aa0.8□□□□□ -2.28
SMC1YFL008W DDI3P0CH64 225 aa0.8□□□□□ -2.28
SMC1YFL008W SRP21P32342 167 aa0.8□□□□□ -2.28
SMC1YFL008W PAU2P32612 120 aa0.8□□□□□ -2.28
SMC1YFL008W ZRT3P34240 503 aa0.8□□□□□ -2.28
SMC1YFL008W YKL102CP34249 101 aa0.8□□□□□ -2.28
SMC1YFL008W PAU13P38725 120 aa0.8□□□□□ -2.28
SMC1YFL008W GGC1P38988 300 aa0.8□□□□□ -2.28
SMC1YFL008W YJL218WP40892 196 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W TAD2P47058 250 aa0.8□□□□□ -2.28
SMC1YFL008W YJR015WP47090 510 aa0.8□□□□□ -2.28
SMC1YFL008W MDM34P53083 459 aa0.8□□□□□ -2.28
SMC1YFL008W PAU12P53343 120 aa0.8□□□□□ -2.28
SMC1YFL008W PAU10Q03050 120 aa0.8□□□□□ -2.28
SMC1YFL008W UPS3Q04006 179 aa0.8□□□□□ -2.28
SMC1YFL008W RRG8Q06109 277 aa0.8□□□□□ -2.28
SMC1YFL008W HPA2Q06592 156 aa0.8□□□□□ -2.28
SMC1YFL008W CTR3Q06686 241 aa0.8□□□□□ -2.28
SMC1YFL008W RAF1Q06891 181 aa0.8□□□□□ -2.28
SMC1YFL008W PAM18Q07914 168 aa0.8□□□□□ -2.28
SMC1YFL008W PAU20Q08322 120 aa0.8□□□□□ -2.28
SMC1YFL008W YOR385WQ08909 290 aa0.8□□□□□ -2.28
SMC1YFL008W ERP3Q12403 225 aa0.8□□□□□ -2.28
SMC1YFL008W YIL102C-AQ2V2P5 75 aa0.8□□□□□ -2.28
SMC1YFL008W PAU9Q3E770 120 aa0.8□□□□□ -2.28
SMC1YFL008W YIL134C-AQ45U18 67 aa0.8□□□□□ -2.28
SMC1YFL008W UBA3Q99344 299 aa0.8□□□□□ -2.28
SMC1YFL008W ECM12O13529 151 aa0.8□□□□□ -2.28
SMC1YFL008W RPL9AP05738 191 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W RPS22AP0C0W1 130 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W YOL163WP0CF20 169 aa0.8□□□□□ -2.28
SMC1YFL008W HMRA1P0CY11 126 aa0.8□□□□□ -2.28
SMC1YFL008W ARF2P19146 181 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W QCR9P22289 66 aa0.8□□□□□ -2.28
SMC1YFL008W SNC2P33328 115 aa0.8□□□□□ -2.28
SMC1YFL008W RPL14AP36105 138 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W PRS4P38063 326 aaPredicted RBP0.8□□□□□ -2.28
SMC1YFL008W YHR022CP38763 256 aa0.8□□□□□ -2.28
SMC1YFL008W ECM14P38836 430 aa0.8□□□□□ -2.28
SMC1YFL008W BTT1P40314 149 aaPredicted RBP0.8□□□□□ -2.28
SMC1YFL008W PHS1P40857 217 aa0.8□□□□□ -2.28
SMC1YFL008W ERJ5P43613 295 aaPredicted RBP0.8□□□□□ -2.28
SMC1YFL008W PIR5P46999 287 aa0.8□□□□□ -2.28
SMC1YFL008W RPL9BP51401 191 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W SBH1P52870 82 aa0.8□□□□□ -2.28
SMC1YFL008W ALG9P53868 555 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W RNH201P53942 307 aa0.8□□□□□ -2.28
SMC1YFL008W AQR1P53943 586 aa0.8□□□□□ -2.28
SMC1YFL008W AIM34Q03673 198 aa0.8□□□□□ -2.28
SMC1YFL008W SEC13Q04491 297 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W YLR036CQ07986 203 aa0.8□□□□□ -2.28
SMC1YFL008W RDL2Q08742 149 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W MPD1Q12404 318 aaKnown RBP0.8□□□□□ -2.28
SMC1YFL008W PEX11Q12462 236 aa0.8□□□□□ -2.28
SMC1YFL008W PRP8P33334 2413 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms