RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C TIM21P53220 239 aa8.5□□□□□ -1.05
SPC25YER018C LRS4Q04087 347 aaKnown RBP8.5□□□□□ -1.05
SPC25YER018C PRM3Q08931 133 aa8.5□□□□□ -1.05
SPC25YER018C TY1A-GR1Q12085 440 aa8.5□□□□□ -1.05
SPC25YER018C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.5□□□□□ -1.05
SPC25YER018C TY1A-OLQ92392 440 aaKnown RBP8.5□□□□□ -1.05
SPC25YER018C PRY2P36110 329 aa8.49□□□□□ -1.05
SPC25YER018C PGD1P40356 397 aa8.49□□□□□ -1.05
SPC25YER018C TOM7P53507 60 aa8.49□□□□□ -1.05
SPC25YER018C YPR145C-AQ2V2P0 78 aa8.49□□□□□ -1.05
SPC25YER018C COX2P00410 251 aa8.48□□□□□ -1.05
SPC25YER018C MRPS9P38120 278 aa8.48□□□□□ -1.05
SPC25YER018C ATG8P38182 117 aaRIP-Chip data8.48□□□□□ -1.05not detected
SPC25YER018C SNF11P38956 169 aa8.48□□□□□ -1.05
SPC25YER018C VMA21P41806 77 aa8.48□□□□□ -1.05
SPC25YER018C RPA43P46669 326 aa8.48□□□□□ -1.05
SPC25YER018C RAV2Q03956 351 aa8.48□□□□□ -1.05
SPC25YER018C NAT3Q06504 195 aa8.48□□□□□ -1.05
SPC25YER018C YGR035W-AQ45U48 73 aa8.48□□□□□ -1.05
SPC25YER018C YLR302CO13544 120 aa8.47□□□□□ -1.05
SPC25YER018C ERS1P17261 260 aa8.47□□□□□ -1.05
SPC25YER018C YML108WQ03759 105 aa8.47□□□□□ -1.05
SPC25YER018C MRS1P07266 363 aa8.46□□□□□ -1.06
SPC25YER018C YKL102CP34249 101 aa8.46□□□□□ -1.06
SPC25YER018C ICS2P38284 255 aa8.46□□□□□ -1.06
SPC25YER018C MBB1P39534 108 aa8.46□□□□□ -1.06
SPC25YER018C CAX4P53223 239 aa8.46□□□□□ -1.06
SPC25YER018C ZEO1Q08245 113 aa8.46□□□□□ -1.06
SPC25YER018C CMC1P36064 111 aa8.45□□□□□ -1.06
SPC25YER018C GPI2P46961 280 aa8.45□□□□□ -1.06
SPC25YER018C ATX2Q12067 313 aa8.45□□□□□ -1.06
SPC25YER018C YPR013CQ12145 317 aa8.45□□□□□ -1.06
SPC25YER018C FMP49A0A023PZB3 126 aa8.44□□□□□ -1.06
SPC25YER018C RPB3P16370 318 aaKnown RBP8.44□□□□□ -1.06
SPC25YER018C MST28P39552 234 aa8.44□□□□□ -1.06
SPC25YER018C AGE2P40529 298 aa8.44□□□□□ -1.06
SPC25YER018C MOG1P47123 218 aa8.44□□□□□ -1.06
SPC25YER018C AIM24P47127 394 aa8.44□□□□□ -1.06
SPC25YER018C MST27P53176 234 aa8.44□□□□□ -1.06
SPC25YER018C IZH1Q03419 316 aa8.44□□□□□ -1.06
SPC25YER018C RRG8Q06109 277 aa8.44□□□□□ -1.06
SPC25YER018C SMT3Q12306 101 aaKnown RBP8.44□□□□□ -1.06
SPC25YER018C LAS17Q12446 633 aa8.44□□□□□ -1.06
SPC25YER018C YHR212W-AP0CX91 67 aa8.43□□□□□ -1.06
SPC25YER018C PRE9P23638 258 aaKnown RBP8.43□□□□□ -1.06
SPC25YER018C HSP10P38910 106 aa8.43□□□□□ -1.06
SPC25YER018C MRPL49P40858 161 aaPredicted RBP8.43□□□□□ -1.06
SPC25YER018C MGA1P53050 456 aa8.43□□□□□ -1.06
SPC25YER018C ATG39Q06159 398 aa8.43□□□□□ -1.06
SPC25YER018C STP4Q07351 490 aa8.43□□□□□ -1.06
SPC25YER018C YOL160WQ08321 113 aa8.43□□□□□ -1.06
SPC25YER018C DCN1Q12395 269 aa8.43□□□□□ -1.06
SPC25YER018C HTB2P02294 131 aa8.42□□□□□ -1.06
SPC25YER018C YBR090CP38253 122 aa8.42□□□□□ -1.06
SPC25YER018C NSE4P43124 402 aa8.42□□□□□ -1.06
SPC25YER018C LCB3P47013 409 aa8.42□□□□□ -1.06
SPC25YER018C DAN1P47178 298 aa8.42□□□□□ -1.06
SPC25YER018C HHO1P53551 258 aa8.42□□□□□ -1.06
SPC25YER018C PAU15P40585 124 aa8.41□□□□□ -1.06
SPC25YER018C YGR025WP53216 100 aa8.41□□□□□ -1.06
SPC25YER018C YLR118CQ12354 227 aa8.41□□□□□ -1.06
SPC25YER018C YOR011W-AQ3E807 68 aa8.41□□□□□ -1.06
SPC25YER018C RPL31BP0C2H9 113 aaKnown RBP8.4□□□□□ -1.06
SPC25YER018C MRPL20P22354 195 aaPredicted RBP8.4□□□□□ -1.06
SPC25YER018C SDH4P37298 181 aa8.4□□□□□ -1.06
SPC25YER018C YPT10P38146 199 aa8.4□□□□□ -1.06
SPC25YER018C SNU23Q12368 194 aaPredicted RBP8.4□□□□□ -1.06
SPC25YER018C YGL010WP25338 174 aa8.39□□□□□ -1.07
SPC25YER018C SRP21P32342 167 aa8.39□□□□□ -1.07
SPC25YER018C COX18P53239 316 aa8.39□□□□□ -1.07
SPC25YER018C DAD4P69851 72 aa8.39□□□□□ -1.07
SPC25YER018C APS2Q00381 147 aa8.39□□□□□ -1.07
SPC25YER018C IZH3Q07959 543 aa8.39□□□□□ -1.07
SPC25YER018C GEP3Q08622 556 aa8.39□□□□□ -1.07
SPC25YER018C NHP6AP11632 93 aaKnown RBP8.38□□□□□ -1.07
SPC25YER018C POF1P25576 258 aa8.38□□□□□ -1.07
SPC25YER018C SRP14P38985 146 aa8.38□□□□□ -1.07
SPC25YER018C YMR141CP40211 102 aa8.38□□□□□ -1.07
SPC25YER018C FYV6P53913 173 aa8.38□□□□□ -1.07
SPC25YER018C ATP19P81451 68 aa8.38□□□□□ -1.07
SPC25YER018C YOR105WQ08504 108 aa8.38□□□□□ -1.07
SPC25YER018C YOP1Q12402 180 aa8.38□□□□□ -1.07
SPC25YER018C YCL001W-BQ96VH2 84 aa8.38□□□□□ -1.07
SPC25YER018C YBR144CP34215 104 aa8.37□□□□□ -1.07
SPC25YER018C SIM1P40472 476 aa8.37□□□□□ -1.07
SPC25YER018C GTT1P40582 234 aa8.37□□□□□ -1.07
SPC25YER018C YIP3P53633 176 aa8.37□□□□□ -1.07
SPC25YER018C DAD1Q12248 94 aa8.37□□□□□ -1.07
SPC25YER018C RTG1P32607 177 aa8.36□□□□□ -1.07
SPC25YER018C AME1P38313 324 aa8.36□□□□□ -1.07
SPC25YER018C YDL183CP48569 320 aa8.36□□□□□ -1.07
SPC25YER018C PRM7Q12459 698 aa8.36□□□□□ -1.07
SPC25YER018C UTR5P32630 166 aa8.35□□□□□ -1.07
SPC25YER018C FZF1P32805 299 aa8.35□□□□□ -1.07
SPC25YER018C DAD2P36162 133 aa8.35□□□□□ -1.07
SPC25YER018C YBR013CP38215 129 aa8.35□□□□□ -1.07
SPC25YER018C ECM33P38248 429 aaKnown RBP8.35□□□□□ -1.07
SPC25YER018C PRE5P40302 234 aaKnown RBP8.35□□□□□ -1.07
SPC25YER018C TDA4P47153 279 aa8.35□□□□□ -1.07
SPC25YER018C TAR1Q8TGM6 124 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms