RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C RPB3P16370 318 aaKnown RBP3.61□□□□□ -1.83
NUP42YDR192C ALK2P32789 676 aaPredicted RBP3.61□□□□□ -1.83
NUP42YDR192C ECM14P38836 430 aa3.61□□□□□ -1.83
NUP42YDR192C COX15P40086 486 aa3.61□□□□□ -1.83
NUP42YDR192C YCH1P42937 148 aa3.61□□□□□ -1.83
NUP42YDR192C YFL051CP43552 160 aa3.61□□□□□ -1.83
NUP42YDR192C PIR5P46999 287 aa3.61□□□□□ -1.83
NUP42YDR192C ARP3P47117 449 aaKnown RBP3.61□□□□□ -1.83
NUP42YDR192C YGL262WP53054 175 aa3.61□□□□□ -1.83
NUP42YDR192C TIM21P53220 239 aa3.61□□□□□ -1.83
NUP42YDR192C PAU4P53427 120 aa3.61□□□□□ -1.83
NUP42YDR192C SED1Q01589 338 aa3.61□□□□□ -1.83
NUP42YDR192C EST3Q03096 181 aa3.61□□□□□ -1.83
NUP42YDR192C SDH7Q04401 133 aa3.61□□□□□ -1.83
NUP42YDR192C ADH6Q04894 360 aaKnown RBP3.61□□□□□ -1.83
NUP42YDR192C RPS25AQ3E792 108 aaPredicted RBP3.61□□□□□ -1.83
NUP42YDR192C CDC39P25655 2108 aaKnown RBP3.61□□□□□ -1.83
NUP42YDR192C RPL39P04650 51 aa3.6□□□□□ -1.83
NUP42YDR192C PAU1P0CE88 120 aa3.6□□□□□ -1.83
NUP42YDR192C PAU14P0CE89 120 aa3.6□□□□□ -1.83
NUP42YDR192C PAU6P0CE90 120 aa3.6□□□□□ -1.83
NUP42YDR192C PAU18P0CE91 120 aa3.6□□□□□ -1.83
NUP42YDR192C PAU8P0CE92 120 aa3.6□□□□□ -1.83
NUP42YDR192C PAU11P0CE93 120 aa3.6□□□□□ -1.83
NUP42YDR192C URA5P13298 226 aaKnown RBP3.6□□□□□ -1.83
NUP42YDR192C FCY2P17064 533 aa3.6□□□□□ -1.83
NUP42YDR192C TOM40P23644 387 aaKnown RBP3.6□□□□□ -1.83
NUP42YDR192C CNB1P25296 175 aa3.6□□□□□ -1.83
NUP42YDR192C SUA7P29055 345 aaPredicted RBP3.6□□□□□ -1.83
NUP42YDR192C PAU13P38725 120 aa3.6□□□□□ -1.83
NUP42YDR192C MIC27P50945 234 aa3.6□□□□□ -1.83
NUP42YDR192C HHO1P53551 258 aa3.6□□□□□ -1.83
NUP42YDR192C PAU10Q03050 120 aa3.6□□□□□ -1.83
NUP42YDR192C PAU20Q08322 120 aa3.6□□□□□ -1.83
NUP42YDR192C PRR2Q12310 699 aa3.6□□□□□ -1.83
NUP42YDR192C SNU23Q12368 194 aaPredicted RBP3.6□□□□□ -1.83
NUP42YDR192C ATG5Q12380 294 aa3.6□□□□□ -1.83
NUP42YDR192C PAU9Q3E770 120 aa3.6□□□□□ -1.83
NUP42YDR192C CMC2Q3E7A4 109 aa3.6□□□□□ -1.83
NUP42YDR192C YMR105W-AQ8TGS8 64 aa3.6□□□□□ -1.83
NUP42YDR192C RPS22AP0C0W1 130 aaKnown RBP3.59□□□□□ -1.83
NUP42YDR192C NOP1P15646 327 aaKnown RBP3.59□□□□□ -1.83
NUP42YDR192C HSP12P22943 109 aaKnown RBP3.59□□□□□ -1.83
NUP42YDR192C AGA2P32781 87 aa3.59□□□□□ -1.83
NUP42YDR192C IRC22P40006 225 aa3.59□□□□□ -1.83
NUP42YDR192C CYB5P40312 120 aa3.59□□□□□ -1.83
NUP42YDR192C GTT1P40582 234 aa3.59□□□□□ -1.83
NUP42YDR192C YPS5P53057 165 aa3.59□□□□□ -1.83
NUP42YDR192C API2Q04413 109 aa3.59□□□□□ -1.83
NUP42YDR192C RRG8Q06109 277 aa3.59□□□□□ -1.83
NUP42YDR192C YOR015WQ12169 119 aa3.59□□□□□ -1.83
NUP42YDR192C RAX2Q12465 1220 aa3.59□□□□□ -1.83
NUP42YDR192C VMA9Q3E7B6 73 aa3.59□□□□□ -1.83
NUP42YDR192C COA2Q3E823 68 aa3.59□□□□□ -1.83
NUP42YDR192C COX2P00410 251 aa3.58□□□□□ -1.84
NUP42YDR192C HTB1P02293 131 aaKnown RBP3.58□□□□□ -1.84
NUP42YDR192C SPO13P23624 291 aa3.58□□□□□ -1.84
NUP42YDR192C MRPS9P38120 278 aa3.58□□□□□ -1.84
NUP42YDR192C YBL071CP38185 102 aa3.58□□□□□ -1.84
NUP42YDR192C YPT31P38555 223 aaKnown RBP3.58□□□□□ -1.84
NUP42YDR192C CDC40P40968 455 aaPredicted RBP3.58□□□□□ -1.84
NUP42YDR192C MGA1P53050 456 aa3.58□□□□□ -1.84
NUP42YDR192C APS2Q00381 147 aa3.58□□□□□ -1.84
NUP42YDR192C MCH1Q07376 486 aa3.58□□□□□ -1.84
NUP42YDR192C PET494P07390 489 aaPredicted RBP3.57□□□□□ -1.84
NUP42YDR192C YKL187CP34231 750 aa3.57□□□□□ -1.84
NUP42YDR192C KTI12P34253 313 aaKnown RBP3.57□□□□□ -1.84
NUP42YDR192C SUR2P38992 349 aa3.57□□□□□ -1.84
NUP42YDR192C PAU15P40585 124 aa3.57□□□□□ -1.84
NUP42YDR192C PHS1P40857 217 aa3.57□□□□□ -1.84
NUP42YDR192C DAD3P69850 94 aa3.57□□□□□ -1.84
NUP42YDR192C SHH3Q04487 196 aa3.57□□□□□ -1.84
NUP42YDR192C YDR115WQ04598 105 aa3.57□□□□□ -1.84
NUP42YDR192C FRQ1Q06389 190 aa3.57□□□□□ -1.84
NUP42YDR192C YOL118CQ08259 102 aa3.57□□□□□ -1.84
NUP42YDR192C GEP5Q12393 293 aa3.57□□□□□ -1.84
NUP42YDR192C SEC16P48415 2195 aaKnown RBP3.56□□□□□ -1.84
NUP42YDR192C NHP6AP11632 93 aaKnown RBP3.56□□□□□ -1.84
NUP42YDR192C SPS100P13130 326 aa3.56□□□□□ -1.84
NUP42YDR192C AHT1P29589 182 aa3.56□□□□□ -1.84
NUP42YDR192C RPL14AP36105 138 aaKnown RBP3.56□□□□□ -1.84
NUP42YDR192C ATG8P38182 117 aaRIP-Chip data3.56□□□□□ -1.84not detected
NUP42YDR192C RRT1P38192 103 aa3.56□□□□□ -1.84
NUP42YDR192C CSH1P38287 376 aa3.56□□□□□ -1.84
NUP42YDR192C DER1P38307 211 aa3.56□□□□□ -1.84
NUP42YDR192C RPL14BP38754 138 aaKnown RBP3.56□□□□□ -1.84
NUP42YDR192C DOG2P38773 246 aa3.56□□□□□ -1.84
NUP42YDR192C DOG1P38774 246 aa3.56□□□□□ -1.84
NUP42YDR192C CTR2P38865 189 aa3.56□□□□□ -1.84
NUP42YDR192C YAR068WP39564 161 aa3.56□□□□□ -1.84
NUP42YDR192C YIR020CP40575 100 aa3.56□□□□□ -1.84
NUP42YDR192C COX16P47081 118 aa3.56□□□□□ -1.84
NUP42YDR192C YJR015WP47090 510 aa3.56□□□□□ -1.84
NUP42YDR192C MIX17Q03667 156 aa3.56□□□□□ -1.84
NUP42YDR192C GTO3Q04806 366 aa3.56□□□□□ -1.84
NUP42YDR192C PAA1Q12447 191 aaKnown RBP3.56□□□□□ -1.84
NUP42YDR192C YCL048W-AQ2V2Q2 79 aa3.56□□□□□ -1.84
NUP42YDR192C FMP49A0A023PZB3 126 aa3.55□□□□□ -1.84
NUP42YDR192C YCR025CP25352 136 aa3.55□□□□□ -1.84
NUP42YDR192C YGR269WP40326 108 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms