RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W BFR1P38934 470 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14 RIP-Chip
VPS41YDR080W PRM7Q12459 698 aa1.69□□□□□ -2.14
VPS41YDR080W YBR013CP38215 129 aa1.68□□□□□ -2.14
VPS41YDR080W WSS1P38838 269 aa1.68□□□□□ -2.14
VPS41YDR080W RPL13BP40212 199 aaKnown RBP1.68□□□□□ -2.14
VPS41YDR080W AIM24P47127 394 aa1.68□□□□□ -2.14
VPS41YDR080W LST7P53237 242 aa1.68□□□□□ -2.14
VPS41YDR080W HCH1P53834 153 aa1.68□□□□□ -2.14
VPS41YDR080W DYN2Q02647 92 aa1.68□□□□□ -2.14
VPS41YDR080W BET5Q03630 159 aa1.68□□□□□ -2.14
VPS41YDR080W YPL264CQ08980 353 aa1.68□□□□□ -2.14
VPS41YDR080W RPL13AQ12690 199 aaPredicted RBP1.68□□□□□ -2.14
VPS41YDR080W CDC7P06243 507 aa1.68□□□□□ -2.14
VPS41YDR080W RNA15P25299 296 aaPredicted RBP1.68□□□□□ -2.14
VPS41YDR080W YHR022CP38763 256 aa1.68□□□□□ -2.14
VPS41YDR080W RBL2P48606 106 aaKnown RBP1.68□□□□□ -2.14
VPS41YDR080W VAR1P02381 398 aa1.68□□□□□ -2.14
VPS41YDR080W PUT1P09368 476 aa1.68□□□□□ -2.14
VPS41YDR080W DDI2P0CH63 225 aa1.68□□□□□ -2.14
VPS41YDR080W DDI3P0CH64 225 aa1.68□□□□□ -2.14
VPS41YDR080W RPS18AP0CX55 146 aaKnown RBP1.68□□□□□ -2.14
VPS41YDR080W RPS18BP0CX56 146 aaPredicted RBP1.68□□□□□ -2.14
VPS41YDR080W TRS20P38334 175 aa1.68□□□□□ -2.14
VPS41YDR080W SNU13P39990 126 aaKnown RBP1.68□□□□□ -2.14
VPS41YDR080W YIR035CP40579 254 aa1.68□□□□□ -2.14
VPS41YDR080W YPS5P53057 165 aa1.68□□□□□ -2.14
VPS41YDR080W YCT1Q12235 531 aa1.68□□□□□ -2.14
VPS41YDR080W YLL066W-BQ8TGJ7 56 aa1.68□□□□□ -2.14
VPS41YDR080W YPC1P38298 316 aa1.67□□□□□ -2.14
VPS41YDR080W GDT1P38301 280 aaPredicted RBP1.67□□□□□ -2.14
VPS41YDR080W ASP1P38986 381 aaPredicted RBP1.67□□□□□ -2.14
VPS41YDR080W LCB3P47013 409 aa1.67□□□□□ -2.14
VPS41YDR080W NIF3P53081 288 aa1.67□□□□□ -2.14
VPS41YDR080W YGL185CP53100 379 aa1.67□□□□□ -2.14
VPS41YDR080W LCL1Q02786 101 aa1.67□□□□□ -2.14
VPS41YDR080W YOR283WQ12040 230 aaKnown RBP1.67□□□□□ -2.14
VPS41YDR080W MRPL20P22354 195 aaPredicted RBP1.67□□□□□ -2.14
VPS41YDR080W HTD2P38790 280 aaKnown RBP1.67□□□□□ -2.14
VPS41YDR080W YJL028WP47062 111 aa1.67□□□□□ -2.14
VPS41YDR080W ERI1P62651 68 aaKnown RBP1.67□□□□□ -2.14
VPS41YDR080W ATG5Q12380 294 aa1.67□□□□□ -2.14
VPS41YDR080W YDR157WA0A023PZE8 133 aa1.66□□□□□ -2.14
VPS41YDR080W ADH1P00330 348 aaKnown RBP1.66□□□□□ -2.14
VPS41YDR080W RPL33AP05744 107 aaKnown RBP1.66□□□□□ -2.14
VPS41YDR080W ACP1P32463 125 aa1.66□□□□□ -2.14
VPS41YDR080W YKL162CP36052 402 aa1.66□□□□□ -2.14
VPS41YDR080W COS8P38723 381 aa1.66□□□□□ -2.14
VPS41YDR080W RRF1P38771 230 aa1.66□□□□□ -2.14
VPS41YDR080W EMC5P40540 141 aa1.66□□□□□ -2.14
VPS41YDR080W CDC40P40968 455 aaPredicted RBP1.66□□□□□ -2.14
VPS41YDR080W RPL33BP41056 107 aaKnown RBP1.66□□□□□ -2.14
VPS41YDR080W MAK3Q03503 176 aa1.66□□□□□ -2.14
VPS41YDR080W YLR031WQ07978 186 aa1.66□□□□□ -2.14
VPS41YDR080W YOL160WQ08321 113 aa1.66□□□□□ -2.14
VPS41YDR080W POP8P38208 133 aa1.66□□□□□ -2.14
VPS41YDR080W ILM1P47155 203 aa1.66□□□□□ -2.14
VPS41YDR080W YMR253CQ04835 414 aa1.66□□□□□ -2.14
VPS41YDR080W SDO1Q07953 250 aaKnown RBP1.66□□□□□ -2.14
VPS41YDR080W ARG80P07249 177 aa1.65□□□□□ -2.14
VPS41YDR080W CPT1P17898 393 aa1.65□□□□□ -2.14
VPS41YDR080W SFT2P38166 215 aa1.65□□□□□ -2.14
VPS41YDR080W PET100P38958 111 aa1.65□□□□□ -2.14
VPS41YDR080W SWM2P40342 146 aa1.65□□□□□ -2.14
VPS41YDR080W TOM7P53507 60 aa1.65□□□□□ -2.14
VPS41YDR080W YDR366CP87287 132 aa1.65□□□□□ -2.14
VPS41YDR080W TPT1Q12272 230 aaKnown RBP1.65□□□□□ -2.14
VPS41YDR080W SUS1Q6WNK7 96 aa1.65□□□□□ -2.14
VPS41YDR080W RPB3P16370 318 aaKnown RBP1.65□□□□□ -2.15
VPS41YDR080W MRPL3P36516 390 aa1.65□□□□□ -2.15
VPS41YDR080W COX16P47081 118 aa1.65□□□□□ -2.15
VPS41YDR080W BRP1P53194 125 aa1.65□□□□□ -2.15
VPS41YDR080W TMA23Q03525 211 aa1.65□□□□□ -2.15
VPS41YDR080W UTP23Q12339 254 aaKnown RBP1.65□□□□□ -2.15
VPS41YDR080W YDR034C-AP0C289 58 aa1.65□□□□□ -2.15
VPS41YDR080W YLR307C-AQ3E825 87 aa1.65□□□□□ -2.15
VPS41YDR080W URA5P13298 226 aaKnown RBP1.64□□□□□ -2.15
VPS41YDR080W SLM6P38343 150 aa1.64□□□□□ -2.15
VPS41YDR080W DSK2P48510 373 aa1.64□□□□□ -2.15
VPS41YDR080W MIC27P50945 234 aa1.64□□□□□ -2.15
VPS41YDR080W PDR17P53844 350 aa1.64□□□□□ -2.15
VPS41YDR080W MRX11Q03079 207 aa1.64□□□□□ -2.15
VPS41YDR080W YLR179CQ06252 201 aaKnown RBP1.64□□□□□ -2.15
VPS41YDR080W YPL225WQ08971 146 aaKnown RBP1.64□□□□□ -2.15
VPS41YDR080W YCR016WP25617 290 aaKnown RBP1.63□□□□□ -2.15
VPS41YDR080W TIR2P33890 251 aa1.63□□□□□ -2.15
VPS41YDR080W PAN3P36102 679 aaPredicted RBP1.63□□□□□ -2.15
VPS41YDR080W GPX2P38143 162 aa1.63□□□□□ -2.15
VPS41YDR080W AIM25P47140 327 aa1.63□□□□□ -2.15
VPS41YDR080W SEC22P22214 214 aa1.63□□□□□ -2.15
VPS41YDR080W OXA1P39952 402 aa1.63□□□□□ -2.15
VPS41YDR080W GVP36P40531 326 aaKnown RBP1.63□□□□□ -2.15
VPS41YDR080W YGR025WP53216 100 aa1.63□□□□□ -2.15
VPS41YDR080W TIM21P53220 239 aa1.63□□□□□ -2.15
VPS41YDR080W POC4Q12245 148 aaPredicted RBP1.63□□□□□ -2.15
VPS41YDR080W FCY2P17064 533 aa1.62□□□□□ -2.15
VPS41YDR080W MID2P36027 376 aa1.62□□□□□ -2.15
VPS41YDR080W SHB17P36136 271 aaKnown RBP1.62□□□□□ -2.15
VPS41YDR080W KEG1P43614 200 aa1.62□□□□□ -2.15
VPS41YDR080W TMA20P89886 181 aaPredicted RBP1.62□□□□□ -2.15
VPS41YDR080W MRPS16Q02608 121 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms