RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	YER181C	P40097	107 aa		0.71	□□□□□ -2.3
RTR2	YDR066C	YDR476C	Q03362	224 aa		0.71	□□□□□ -2.3
RTR2	YDR066C	NMA1	Q06178	401 aa	Known RBP	0.71	□□□□□ -2.3
RTR2	YDR066C	YPR202W	Q08993	238 aa		0.71	□□□□□ -2.3
RTR2	YDR066C	RIB3	Q99258	208 aa		0.71	□□□□□ -2.3
RTR2	YDR066C	ECM31	P38122	312 aa		0.7	□□□□□ -2.3
RTR2	YDR066C	FMN1	Q03778	218 aa		0.7	□□□□□ -2.3
RTR2	YDR066C	VAM10	Q08474	114 aa		0.7	□□□□□ -2.3
RTR2	YDR066C	PBI2	P0CT04	75 aa	Known RBP	0.69	□□□□□ -2.3
RTR2	YDR066C	HSP150	P32478	413 aa		0.69	□□□□□ -2.3
RTR2	YDR066C	DER1	P38307	211 aa		0.69	□□□□□ -2.3
RTR2	YDR066C	RCF2	P53721	224 aa		0.69	□□□□□ -2.3
RTR2	YDR066C	TLG1	Q03322	224 aa		0.69	□□□□□ -2.3
RTR2	YDR066C	IRC19	Q07843	230 aa		0.69	□□□□□ -2.3
RTR2	YDR066C	RFU1	Q08003	200 aa		0.69	□□□□□ -2.3
RTR2	YDR066C	SPA2	P23201	1466 aa	Known RBP	0.68	□□□□□ -2.3
RTR2	YDR066C	DDR48	P18899	430 aa	Known RBP	0.68	□□□□□ -2.3
RTR2	YDR066C	PHO13	P19881	312 aa		0.68	□□□□□ -2.3
RTR2	YDR066C	HYP2	P23301	157 aa	Known RBP	0.68	□□□□□ -2.3
RTR2	YDR066C	PEX34	P25584	144 aa		0.68	□□□□□ -2.3
RTR2	YDR066C	IPT1	P38954	527 aa		0.68	□□□□□ -2.3
RTR2	YDR066C	VMA10	P48836	114 aa	Known RBP	0.68	□□□□□ -2.3
RTR2	YDR066C	YGL193C	P53097	103 aa		0.68	□□□□□ -2.3
RTR2	YDR066C	SEN15	Q04675	128 aa		0.68	□□□□□ -2.3
RTR2	YDR066C	SCS22	Q6Q595	175 aa		0.68	□□□□□ -2.3
RTR2	YDR066C	RPS28B	P0C0X0	67 aa	Known RBP	0.67	□□□□□ -2.3
RTR2	YDR066C	YGL041W-A	P0C5N3	154 aa		0.67	□□□□□ -2.3
RTR2	YDR066C	BUB2	P26448	306 aa	Predicted RBP	0.67	□□□□□ -2.3
RTR2	YDR066C	MRPL24	P36525	258 aa	Predicted RBP	0.67	□□□□□ -2.3
RTR2	YDR066C	HHY1	P39982	102 aa		0.67	□□□□□ -2.3
RTR2	YDR066C	ATP19	P81451	68 aa		0.67	□□□□□ -2.3
RTR2	YDR066C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.67	□□□□□ -2.3
RTR2	YDR066C	RME1	P32338	300 aa	Known RBP	0.66	□□□□□ -2.3
RTR2	YDR066C	YJL218W	P40892	196 aa	Known RBP	0.66	□□□□□ -2.3
RTR2	YDR066C	DIE2	P50076	525 aa		0.66	□□□□□ -2.3
RTR2	YDR066C	GPI11	Q06636	219 aa		0.66	□□□□□ -2.3
RTR2	YDR066C	RRT7	Q07829	113 aa		0.66	□□□□□ -2.3
RTR2	YDR066C	FIG1	P38224	298 aa		0.65	□□□□□ -2.31
RTR2	YDR066C	GPI2	P46961	280 aa		0.65	□□□□□ -2.31
RTR2	YDR066C	MHF1	Q3E835	90 aa		0.65	□□□□□ -2.31
RTR2	YDR066C	YHR213W-B	Q8TGK1	99 aa		0.65	□□□□□ -2.31
RTR2	YDR066C	RPL33A	P05744	107 aa	Known RBP	0.64	□□□□□ -2.31
RTR2	YDR066C	HAP2	P06774	265 aa		0.64	□□□□□ -2.31
RTR2	YDR066C	HSP12	P22943	109 aa	Known RBP	0.64	□□□□□ -2.31
RTR2	YDR066C	YNL122C	P53921	115 aa	Predicted RBP	0.64	□□□□□ -2.31
RTR2	YDR066C	YCL001W-A	P87012	153 aa		0.64	□□□□□ -2.31
RTR2	YDR066C	YPR153W	Q06537	140 aa		0.64	□□□□□ -2.31
RTR2	YDR066C	YOR072W	Q08486	104 aa		0.64	□□□□□ -2.31
RTR2	YDR066C	ROM2	P51862	1356 aa	Known RBP	0.64	□□□□□ -2.31
RTR2	YDR066C	COX5B	P00425	151 aa		0.63	□□□□□ -2.31
RTR2	YDR066C	RPS22A	P0C0W1	130 aa	Known RBP	0.63	□□□□□ -2.31
RTR2	YDR066C	NHP6A	P11632	93 aa	Known RBP	0.63	□□□□□ -2.31
RTR2	YDR066C	SED1	Q01589	338 aa		0.63	□□□□□ -2.31
RTR2	YDR066C	SMD2	Q06217	110 aa	Known RBP	0.63	□□□□□ -2.31
RTR2	YDR066C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.63	□□□□□ -2.31
RTR2	YDR066C	PET20	Q99373	253 aa		0.63	□□□□□ -2.31
RTR2	YDR066C	MOG1	P47123	218 aa		0.62	□□□□□ -2.31
RTR2	YDR066C	MGR2	Q02889	113 aa		0.62	□□□□□ -2.31
RTR2	YDR066C	EST3	Q03096	181 aa		0.62	□□□□□ -2.31
RTR2	YDR066C	PKR1	Q03880	122 aa	Known RBP	0.62	□□□□□ -2.31
RTR2	YDR066C	UBR1	P19812	1950 aa		0.61	□□□□□ -2.31
RTR2	YDR066C	YGL014C-A	P0C5N1	53 aa		0.61	□□□□□ -2.31
RTR2	YDR066C	ARC19	P33204	171 aa	Known RBP	0.61	□□□□□ -2.31
RTR2	YDR066C	IPI1	P38803	334 aa	Predicted RBP	0.61	□□□□□ -2.31
RTR2	YDR066C	YGR201C	P42936	225 aa		0.61	□□□□□ -2.31
RTR2	YDR066C	FYV5	P25585	152 aa		0.6	□□□□□ -2.31
RTR2	YDR066C	YHR140W	P38842	239 aa		0.6	□□□□□ -2.31
RTR2	YDR066C	RAV2	Q03956	351 aa		0.6	□□□□□ -2.31
RTR2	YDR066C	PRM3	Q08931	133 aa		0.6	□□□□□ -2.31
RTR2	YDR066C	HSL1	P34244	1518 aa		0.59	□□□□□ -2.31
RTR2	YDR066C	QCR6	P00127	147 aa		0.59	□□□□□ -2.31
RTR2	YDR066C	RPS1B	P23248	255 aa	Known RBP	0.59	□□□□□ -2.31
RTR2	YDR066C	YMR141C	P40211	102 aa		0.59	□□□□□ -2.31
RTR2	YDR066C	YNL019C	P53975	284 aa		0.59	□□□□□ -2.31
RTR2	YDR066C	IRC21	Q04772	201 aa		0.59	□□□□□ -2.31
RTR2	YDR066C	KTI11	Q3E840	82 aa		0.59	□□□□□ -2.31
RTR2	YDR066C	PET54	P10834	293 aa		0.58	□□□□□ -2.32
RTR2	YDR066C	PHB1	P40961	287 aa		0.58	□□□□□ -2.32
RTR2	YDR066C	MVB12	P42939	101 aa		0.58	□□□□□ -2.32
RTR2	YDR066C	YMR122C	Q03879	124 aa		0.58	□□□□□ -2.32
RTR2	YDR066C	YMR320W	Q04897	101 aa		0.58	□□□□□ -2.32
RTR2	YDR066C	HUT1	Q12520	339 aa		0.58	□□□□□ -2.32
RTR2	YDR066C	SRL3	P36167	246 aa		0.57	□□□□□ -2.32
RTR2	YDR066C	YJL009W	P47078	108 aa		0.57	□□□□□ -2.32
RTR2	YDR066C	LSM8	P47093	109 aa	Known RBP	0.57	□□□□□ -2.32
RTR2	YDR066C	SOM1	Q05676	74 aa		0.57	□□□□□ -2.32
RTR2	YDR066C	NAT5	Q08689	176 aa		0.57	□□□□□ -2.32
RTR2	YDR066C	RPL43A	P0CX25	92 aa	Known RBP	0.56	□□□□□ -2.32
RTR2	YDR066C	RPL43B	P0CX26	92 aa		0.56	□□□□□ -2.32
RTR2	YDR066C	SUI1	P32911	108 aa	Known RBP	0.56	□□□□□ -2.32
RTR2	YDR066C	UTP11	P34247	250 aa	Predicted RBP	0.56	□□□□□ -2.32
RTR2	YDR066C	LSM1	P47017	172 aa	Known RBP	0.56	□□□□□ -2.32
RTR2	YDR066C	EFM5	P53200	248 aa	Known RBP	0.56	□□□□□ -2.32
RTR2	YDR066C	YDR366C	P87287	132 aa		0.56	□□□□□ -2.32
RTR2	YDR066C	YPL067C	Q02754	198 aa		0.56	□□□□□ -2.32
RTR2	YDR066C	RPL40A	P0CH08	128 aa	Known RBP	0.55	□□□□□ -2.32
RTR2	YDR066C	RPL40B	P0CH09	128 aa	Known RBP	0.55	□□□□□ -2.32
RTR2	YDR066C	NMT1	P14743	455 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	FUN14	P18411	198 aa		0.55	□□□□□ -2.32
RTR2	YDR066C	RPC19	P28000	142 aa	Known RBP	0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms