RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YCR085WP25650 117 aa1.09□□□□□ -2.23
CDC36YDL165W URA10P30402 227 aa1.09□□□□□ -2.23
CDC36YDL165W NHP2P32495 156 aaPredicted RBP1.09□□□□□ -2.23
CDC36YDL165W SPS18P32572 300 aa1.09□□□□□ -2.23
CDC36YDL165W MRPS5P33759 307 aa1.09□□□□□ -2.23
CDC36YDL165W YKL102CP34249 101 aa1.09□□□□□ -2.23
CDC36YDL165W SWD2P36104 329 aaPredicted RBP1.09□□□□□ -2.23
CDC36YDL165W NRG2P38082 220 aa1.09□□□□□ -2.23
CDC36YDL165W UMP1P38293 148 aa1.09□□□□□ -2.23
CDC36YDL165W ECM34P38728 170 aa1.09□□□□□ -2.23
CDC36YDL165W MST28P39552 234 aa1.09□□□□□ -2.23
CDC36YDL165W PEX22P39718 180 aa1.09□□□□□ -2.23
CDC36YDL165W YER079WP40052 210 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W PHS1P40857 217 aa1.09□□□□□ -2.23
CDC36YDL165W CUP9P41817 306 aa1.09□□□□□ -2.23
CDC36YDL165W EGT2P42835 1041 aa1.09□□□□□ -2.23
CDC36YDL165W YFR054CP43622 192 aa1.09□□□□□ -2.23
CDC36YDL165W BAT2P47176 376 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W TOS2P50078 622 aa1.09□□□□□ -2.23
CDC36YDL165W KNH1P50112 268 aa1.09□□□□□ -2.23
CDC36YDL165W EMC4P53073 190 aa1.09□□□□□ -2.23
CDC36YDL165W PRM8P53174 237 aa1.09□□□□□ -2.23
CDC36YDL165W ALG9P53868 555 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W LSM3P57743 89 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W YPL039WQ03080 316 aa1.09□□□□□ -2.23
CDC36YDL165W EST3Q03096 181 aa1.09□□□□□ -2.23
CDC36YDL165W VPS71Q03433 280 aa1.09□□□□□ -2.23
CDC36YDL165W BET5Q03630 159 aa1.09□□□□□ -2.23
CDC36YDL165W FCF1Q05498 189 aaPredicted RBP1.09□□□□□ -2.23
CDC36YDL165W NMA1Q06178 401 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W SHH4Q06236 168 aa1.09□□□□□ -2.23
CDC36YDL165W IRC25Q07951 179 aa1.09□□□□□ -2.23
CDC36YDL165W DGA1Q08650 418 aa1.09□□□□□ -2.23
CDC36YDL165W YPL162CQ12042 273 aa1.09□□□□□ -2.23
CDC36YDL165W YOR097CQ12274 175 aaPredicted RBP1.09□□□□□ -2.23
CDC36YDL165W MPD1Q12404 318 aaKnown RBP1.09□□□□□ -2.23
CDC36YDL165W YIL102C-AQ2V2P5 75 aa1.09□□□□□ -2.23
CDC36YDL165W BOL1Q3E793 110 aa1.09□□□□□ -2.23
CDC36YDL165W YBL112CQ3E7Y4 105 aa1.09□□□□□ -2.23
CDC36YDL165W ENV10Q99382 181 aa1.09□□□□□ -2.23
CDC36YDL165W IGO2Q9P305 131 aa1.09□□□□□ -2.23
CDC36YDL165W BCK1Q01389 1478 aa1.09□□□□□ -2.24
CDC36YDL165W USO1P25386 1790 aa1.08□□□□□ -2.24
CDC36YDL165W TY1B-BRQ12193 1756 aa1.08□□□□□ -2.24
CDC36YDL165W TY1B-GR3Q12316 1755 aa1.08□□□□□ -2.24
CDC36YDL165W TY1B-ORQ92393 1755 aa1.08□□□□□ -2.24
CDC36YDL165W CHC1P22137 1653 aaKnown RBP1.08□□□□□ -2.24
CDC36YDL165W URA5P13298 226 aaKnown RBP1.08□□□□□ -2.24
CDC36YDL165W TFS1P14306 219 aa1.08□□□□□ -2.24
CDC36YDL165W KRE1P17260 313 aa1.08□□□□□ -2.24
CDC36YDL165W SPO13P23624 291 aa1.08□□□□□ -2.24
CDC36YDL165W MIG1P27705 504 aa1.08□□□□□ -2.24
CDC36YDL165W QRI5P32344 111 aa1.08□□□□□ -2.24
CDC36YDL165W RPA12P32529 125 aaKnown RBP1.08□□□□□ -2.24
CDC36YDL165W CSE2P33308 149 aa1.08□□□□□ -2.24
CDC36YDL165W TOM6P33448 61 aa1.08□□□□□ -2.24
CDC36YDL165W RPL14AP36105 138 aaKnown RBP1.08□□□□□ -2.24
CDC36YDL165W YBR292CP38357 123 aa1.08□□□□□ -2.24
CDC36YDL165W YHL042WP38729 150 aa1.08□□□□□ -2.24
CDC36YDL165W YHL018WP38744 120 aaPredicted RBP1.08□□□□□ -2.24
CDC36YDL165W FYV4P38783 130 aaPredicted RBP1.08□□□□□ -2.24
CDC36YDL165W SPO73P40031 143 aa1.08□□□□□ -2.24
CDC36YDL165W YNL198CP40166 100 aa1.08□□□□□ -2.24
CDC36YDL165W CCS1P40202 249 aaKnown RBP1.08□□□□□ -2.24
CDC36YDL165W MPM1P40364 252 aa1.08□□□□□ -2.24
CDC36YDL165W TDA4P47153 279 aa1.08□□□□□ -2.24
CDC36YDL165W BNS1P50084 137 aa1.08□□□□□ -2.24
CDC36YDL165W MIC27P50945 234 aa1.08□□□□□ -2.24
CDC36YDL165W YGR219WP53307 113 aa1.08□□□□□ -2.24
CDC36YDL165W CPD1P53314 239 aa1.08□□□□□ -2.24
CDC36YDL165W GPI19Q04082 140 aa1.08□□□□□ -2.24
CDC36YDL165W YMR082CQ04276 118 aa1.08□□□□□ -2.24
CDC36YDL165W RIM9Q04734 239 aa1.08□□□□□ -2.24
CDC36YDL165W HPA2Q06592 156 aa1.08□□□□□ -2.24
CDC36YDL165W HRT1Q08273 121 aa1.08□□□□□ -2.24
CDC36YDL165W ATG41Q12048 136 aa1.08□□□□□ -2.24
CDC36YDL165W DAD1Q12248 94 aa1.08□□□□□ -2.24
CDC36YDL165W YDL180WQ12301 547 aa1.08□□□□□ -2.24
CDC36YDL165W DFM1Q12743 341 aaKnown RBP1.08□□□□□ -2.24
CDC36YDL165W YLR146W-AQ2V2P1 62 aa1.08□□□□□ -2.24
CDC36YDL165W COX19Q3E731 98 aa1.08□□□□□ -2.24
CDC36YDL165W SPO24Q3E752 67 aa1.08□□□□□ -2.24
CDC36YDL165W YCR024C-BQ3E7Z8 88 aa1.08□□□□□ -2.24
CDC36YDL165W ATG40Q99325 256 aa1.08□□□□□ -2.24
CDC36YDL165W YOR338WQ99326 363 aa1.08□□□□□ -2.24
CDC36YDL165W SNF2P22082 1703 aa1.08□□□□□ -2.24
CDC36YDL165W DNF1P32660 1571 aa1.08□□□□□ -2.24
CDC36YDL165W RRP5Q05022 1729 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W TY1B-JR2P47100 1755 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W TY1B-ER2Q03619 1755 aa1.07□□□□□ -2.24
CDC36YDL165W TY1B-MR1Q04214 1755 aa1.07□□□□□ -2.24
CDC36YDL165W TY1B-MR2Q04670 1755 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W TY1B-LR1Q12088 1755 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W TY1B-NL1Q12112 1755 aa1.07□□□□□ -2.24
CDC36YDL165W TY1B-GR1Q12141 1755 aa1.07□□□□□ -2.24
CDC36YDL165W TY1B-BLQ12490 1755 aa1.07□□□□□ -2.24
CDC36YDL165W ARF1P11076 181 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W RPL30P14120 105 aaKnown RBP1.07□□□□□ -2.24
CDC36YDL165W SEC11P15367 167 aa1.07□□□□□ -2.24
CDC36YDL165W ARF2P19146 181 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms