RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C HST4P53688 370 aa3.2□□□□□ -1.9
PRP11YDL043C AVO2Q04749 426 aa3.2□□□□□ -1.9
PRP11YDL043C FCF1Q05498 189 aaPredicted RBP3.2□□□□□ -1.9
PRP11YDL043C DGA1Q08650 418 aa3.2□□□□□ -1.9
PRP11YDL043C YPS3Q12303 508 aa3.2□□□□□ -1.9
PRP11YDL043C DNF1P32660 1571 aa3.2□□□□□ -1.9
PRP11YDL043C RPL23AP0CX41 137 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C RPL23BP0CX42 137 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C YCR090CP25654 182 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C APS1P35181 156 aa3.19□□□□□ -1.9
PRP11YDL043C PTH1P38876 190 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C GCV3P39726 170 aaPredicted RBP3.19□□□□□ -1.9
PRP11YDL043C YER181CP40097 107 aa3.19□□□□□ -1.9
PRP11YDL043C DFG10P40526 253 aa3.19□□□□□ -1.9
PRP11YDL043C EMC5P40540 141 aa3.19□□□□□ -1.9
PRP11YDL043C EMC4P53073 190 aa3.19□□□□□ -1.9
PRP11YDL043C RPL22BP56628 122 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C GRX5Q02784 150 aa3.19□□□□□ -1.9
PRP11YDL043C ANT1Q06497 328 aa3.19□□□□□ -1.9
PRP11YDL043C PBP4Q07362 185 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C PRM3Q08931 133 aa3.19□□□□□ -1.9
PRP11YDL043C SLM3Q12093 417 aa3.19□□□□□ -1.9
PRP11YDL043C YOR097CQ12274 175 aaPredicted RBP3.19□□□□□ -1.9
PRP11YDL043C YPR064WQ12492 139 aa3.19□□□□□ -1.9
PRP11YDL043C YLR363W-AQ3E747 85 aa3.19□□□□□ -1.9
PRP11YDL043C YRF1-3P0CX14 1859 aa3.19□□□□□ -1.9
PRP11YDL043C YRF1-7P0CX15 1859 aa3.19□□□□□ -1.9
PRP11YDL043C YRF1-6P53819 1859 aa3.19□□□□□ -1.9
PRP11YDL043C PDR15Q04182 1529 aaKnown RBP3.19□□□□□ -1.9
PRP11YDL043C CKS1P20486 150 aaKnown RBP3.18□□□□□ -1.9
PRP11YDL043C MRP17P28778 131 aa3.18□□□□□ -1.9
PRP11YDL043C ALK2P32789 676 aaPredicted RBP3.18□□□□□ -1.9
PRP11YDL043C YBL059WP34224 193 aa3.18□□□□□ -1.9
PRP11YDL043C REE1P40893 198 aa3.18□□□□□ -1.9
PRP11YDL043C TDA4P47153 279 aa3.18□□□□□ -1.9
PRP11YDL043C TOS8P53147 276 aa3.18□□□□□ -1.9
PRP11YDL043C MPC1P53157 130 aaKnown RBP3.18□□□□□ -1.9
PRP11YDL043C VHT1P53241 593 aa3.18□□□□□ -1.9
PRP11YDL043C NMA1Q06178 401 aaKnown RBP3.18□□□□□ -1.9
PRP11YDL043C RRG7Q08774 242 aaPredicted RBP3.18□□□□□ -1.9
PRP11YDL043C RPA190P10964 1664 aaKnown RBP3.17□□□□□ -1.9
PRP11YDL043C YRF1-2P40105 1681 aa3.17□□□□□ -1.9
PRP11YDL043C PAU19P0CE85 124 aa3.17□□□□□ -1.9
PRP11YDL043C PAU21P0CE86 164 aa3.17□□□□□ -1.9
PRP11YDL043C PAU22P0CE87 164 aa3.17□□□□□ -1.9
PRP11YDL043C PAU3P25610 124 aa3.17□□□□□ -1.9
PRP11YDL043C YCR085WP25650 117 aa3.17□□□□□ -1.9
PRP11YDL043C MIG1P27705 504 aa3.17□□□□□ -1.9
PRP11YDL043C ZRT3P34240 503 aa3.17□□□□□ -1.9
PRP11YDL043C YRA2P36036 203 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
PRP11YDL043C FMP46P36141 133 aaKnown RBP3.17□□□□□ -1.9
PRP11YDL043C SDS24P38314 527 aa3.17□□□□□ -1.9
PRP11YDL043C YHR140WP38842 239 aa3.17□□□□□ -1.9
PRP11YDL043C ASP1P38986 381 aaPredicted RBP3.17□□□□□ -1.9
PRP11YDL043C KRE9P39005 276 aa3.17□□□□□ -1.9
PRP11YDL043C CUP9P41817 306 aa3.17□□□□□ -1.9
PRP11YDL043C KNH1P50112 268 aa3.17□□□□□ -1.9
PRP11YDL043C YGR164WP53291 111 aa3.17□□□□□ -1.9
PRP11YDL043C YLR012CQ07927 99 aa3.17□□□□□ -1.9
PRP11YDL043C DAD1Q12248 94 aa3.17□□□□□ -1.9
PRP11YDL043C JID1Q12350 301 aa3.17□□□□□ -1.9
PRP11YDL043C TSC3Q3E790 80 aa3.17□□□□□ -1.9
PRP11YDL043C NAG1Q8TGN9 163 aa3.17□□□□□ -1.9
PRP11YDL043C TY4B-HP0C2J7 1802 aa3.16□□□□□ -1.9
PRP11YDL043C POR1P04840 283 aaKnown RBP3.16□□□□□ -1.9
PRP11YDL043C TOM40P23644 387 aaKnown RBP3.16□□□□□ -1.9
PRP11YDL043C URA10P30402 227 aa3.16□□□□□ -1.9
PRP11YDL043C PHO88P38264 188 aaPredicted RBP3.16□□□□□ -1.9
PRP11YDL043C NSA2P40078 261 aaKnown RBP3.16□□□□□ -1.9
PRP11YDL043C YNL208WP40159 199 aaKnown RBP3.16□□□□□ -1.9
PRP11YDL043C CCS1P40202 249 aaKnown RBP3.16□□□□□ -1.9
PRP11YDL043C YIL054WP40524 105 aa3.16□□□□□ -1.9
PRP11YDL043C BNS1P50084 137 aa3.16□□□□□ -1.9
PRP11YDL043C UBC13P52490 153 aa3.16□□□□□ -1.9
PRP11YDL043C YGL260WP53056 76 aa3.16□□□□□ -1.9
PRP11YDL043C YGL088WP53151 121 aa3.16□□□□□ -1.9
PRP11YDL043C CRH1P53301 507 aa3.16□□□□□ -1.9
PRP11YDL043C GPI19Q04082 140 aa3.16□□□□□ -1.9
PRP11YDL043C YMR082CQ04276 118 aa3.16□□□□□ -1.9
PRP11YDL043C HRT1Q08273 121 aa3.16□□□□□ -1.9
PRP11YDL043C YMR230W-AQ3E7B5 62 aa3.16□□□□□ -1.9
PRP11YDL043C DOP1Q03921 1698 aa3.16□□□□□ -1.9
PRP11YDL043C MLP1Q02455 1875 aaKnown RBP3.16□□□□□ -1.9
PRP11YDL043C BCK1Q01389 1478 aa3.16□□□□□ -1.9
PRP11YDL043C YOR093CQ12275 1648 aa3.15□□□□□ -1.9
PRP11YDL043C RPL40AP0CH08 128 aaKnown RBP3.15□□□□□ -1.91
PRP11YDL043C RPL40BP0CH09 128 aaKnown RBP3.15□□□□□ -1.91
PRP11YDL043C YCR050CP25630 102 aa3.15□□□□□ -1.91
PRP11YDL043C NHP2P32495 156 aaPredicted RBP3.15□□□□□ -1.91
PRP11YDL043C NRG2P38082 220 aa3.15□□□□□ -1.91
PRP11YDL043C ECM34P38728 170 aa3.15□□□□□ -1.91
PRP11YDL043C SPL2P38839 148 aa3.15□□□□□ -1.91
PRP11YDL043C YNL198CP40166 100 aa3.15□□□□□ -1.91
PRP11YDL043C MPM1P40364 252 aa3.15□□□□□ -1.91
PRP11YDL043C FIP1P45976 327 aa3.15□□□□□ -1.91
PRP11YDL043C AIM25P47140 327 aa3.15□□□□□ -1.91
PRP11YDL043C DSK2P48510 373 aa3.15□□□□□ -1.91
PRP11YDL043C YGL034CP53186 121 aa3.15□□□□□ -1.91
PRP11YDL043C SWS2P53937 143 aa3.15□□□□□ -1.91
PRP11YDL043C RNH201P53942 307 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms