RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W BUB2P26448 306 aaPredicted RBP1.55□□□□□ -2.16
PAF1YBR279W ATP19P81451 68 aa1.55□□□□□ -2.16
PAF1YBR279W YCR001WP25347 104 aa1.54□□□□□ -2.16
PAF1YBR279W PEX34P25584 144 aa1.54□□□□□ -2.16
PAF1YBR279W YBR027CP38220 110 aa1.54□□□□□ -2.16
PAF1YBR279W HYP2P23301 157 aaKnown RBP1.53□□□□□ -2.16
PAF1YBR279W FMN1Q03778 218 aa1.53□□□□□ -2.16
PAF1YBR279W SMD2Q06217 110 aaKnown RBP1.53□□□□□ -2.16
PAF1YBR279W NSL1Q12143 216 aa1.53□□□□□ -2.16
PAF1YBR279W RCF2P53721 224 aa1.52□□□□□ -2.17
PAF1YBR279W RRT7Q07829 113 aa1.52□□□□□ -2.17
PAF1YBR279W YPR202WQ08993 238 aa1.52□□□□□ -2.17
PAF1YBR279W EFG1Q3E705 233 aaKnown RBP1.52□□□□□ -2.17
PAF1YBR279W FIP1P45976 327 aa1.51□□□□□ -2.17
PAF1YBR279W DER1P38307 211 aa1.5□□□□□ -2.17
PAF1YBR279W SLM6P38343 150 aa1.5□□□□□ -2.17
PAF1YBR279W HSP150P32478 413 aa1.49□□□□□ -2.17
PAF1YBR279W CMC4Q3E7A9 73 aa1.49□□□□□ -2.17
PAF1YBR279W YOL013W-AP0C272 63 aaPredicted RBP1.48□□□□□ -2.17
PAF1YBR279W MRS4P23500 304 aa1.48□□□□□ -2.17
PAF1YBR279W YER181CP40097 107 aa1.48□□□□□ -2.17
PAF1YBR279W RFU1Q08003 200 aa1.48□□□□□ -2.17
PAF1YBR279W YOR072WQ08486 104 aa1.48□□□□□ -2.17
PAF1YBR279W FIG1P38224 298 aa1.47□□□□□ -2.17
PAF1YBR279W SRP21P32342 167 aa1.46□□□□□ -2.18
PAF1YBR279W YAP3P38749 330 aa1.46□□□□□ -2.18
PAF1YBR279W IRC19Q07843 230 aa1.46□□□□□ -2.18
PAF1YBR279W YHR213W-BQ8TGK1 99 aa1.46□□□□□ -2.18
PAF1YBR279W IPT1P38954 527 aa1.45□□□□□ -2.18
PAF1YBR279W YNL122CP53921 115 aaPredicted RBP1.45□□□□□ -2.18
PAF1YBR279W PHO13P19881 312 aa1.44□□□□□ -2.18
PAF1YBR279W PET20Q99373 253 aa1.44□□□□□ -2.18
PAF1YBR279W GPI2P46961 280 aa1.43□□□□□ -2.18
PAF1YBR279W VMA10P48836 114 aaKnown RBP1.43□□□□□ -2.18
PAF1YBR279W HAP2P06774 265 aa1.42□□□□□ -2.18
PAF1YBR279W MRPL24P36525 258 aaPredicted RBP1.42□□□□□ -2.18
PAF1YBR279W ATG8P38182 117 aaRIP-Chip data1.42□□□□□ -2.18not detected
PAF1YBR279W GIM4P40005 111 aaKnown RBP1.42□□□□□ -2.18
PAF1YBR279W YPR153WQ06537 140 aa1.42□□□□□ -2.18
PAF1YBR279W GPI11Q06636 219 aa1.42□□□□□ -2.18
PAF1YBR279W POP7P38291 140 aa1.41□□□□□ -2.18
PAF1YBR279W SED1Q01589 338 aa1.41□□□□□ -2.18
PAF1YBR279W SCS22Q6Q595 175 aa1.41□□□□□ -2.18
PAF1YBR279W YOR1P53049 1477 aa1.41□□□□□ -2.18
PAF1YBR279W RPS22AP0C0W1 130 aaKnown RBP1.4□□□□□ -2.18
PAF1YBR279W PET54P10834 293 aa1.4□□□□□ -2.18
PAF1YBR279W LSM1P47017 172 aaKnown RBP1.4□□□□□ -2.18
PAF1YBR279W RPS22BQ3E7Y3 130 aaKnown RBP1.4□□□□□ -2.18
PAF1YBR279W YJL218WP40892 196 aaKnown RBP1.4□□□□□ -2.19
PAF1YBR279W SPC2Q04969 178 aa1.4□□□□□ -2.19
PAF1YBR279W RPL33AP05744 107 aaKnown RBP1.39□□□□□ -2.19
PAF1YBR279W NHP6AP11632 93 aaKnown RBP1.39□□□□□ -2.19
PAF1YBR279W HHY1P39982 102 aa1.39□□□□□ -2.19
PAF1YBR279W YGL204CP53089 101 aa1.39□□□□□ -2.19
PAF1YBR279W MGR2Q02889 113 aa1.39□□□□□ -2.19
PAF1YBR279W DDR48P18899 430 aaKnown RBP1.38□□□□□ -2.19
PAF1YBR279W SRL3P36167 246 aa1.38□□□□□ -2.19
PAF1YBR279W YGR042WP53227 271 aa1.38□□□□□ -2.19
PAF1YBR279W RAV2Q03956 351 aa1.38□□□□□ -2.19
PAF1YBR279W ROM2P51862 1356 aaKnown RBP1.37□□□□□ -2.19
PAF1YBR279W IRC21Q04772 201 aa1.37□□□□□ -2.19
PAF1YBR279W HUT1Q12520 339 aa1.37□□□□□ -2.19
PAF1YBR279W RIB3Q99258 208 aa1.37□□□□□ -2.19
PAF1YBR279W RIF1P29539 1916 aa1.36□□□□□ -2.19
PAF1YBR279W ACP1P32463 125 aa1.36□□□□□ -2.19
PAF1YBR279W EST3Q03096 181 aa1.36□□□□□ -2.19
PAF1YBR279W PKR1Q03880 122 aaKnown RBP1.36□□□□□ -2.19
PAF1YBR279W HSP12P22943 109 aaKnown RBP1.35□□□□□ -2.19
PAF1YBR279W CYC2P38909 366 aa1.35□□□□□ -2.19
PAF1YBR279W YJL009WP47078 108 aa1.35□□□□□ -2.19
PAF1YBR279W SEN15Q04675 128 aa1.35□□□□□ -2.19
PAF1YBR279W MOG1P47123 218 aa1.34□□□□□ -2.2
PAF1YBR279W YGR201CP42936 225 aa1.33□□□□□ -2.2
PAF1YBR279W MHF1Q3E835 90 aa1.33□□□□□ -2.2
PAF1YBR279W ECM5Q03214 1411 aa1.33□□□□□ -2.2
PAF1YBR279W IPI1P38803 334 aaPredicted RBP1.32□□□□□ -2.2
PAF1YBR279W HHO1P53551 258 aa1.32□□□□□ -2.2
PAF1YBR279W HSL1P34244 1518 aa1.31□□□□□ -2.2
PAF1YBR279W SUA7P29055 345 aaPredicted RBP1.31□□□□□ -2.2
PAF1YBR279W YDR278CQ05612 105 aa1.31□□□□□ -2.2
PAF1YBR279W HFA1P32874 2273 aa1.3□□□□□ -2.2
PAF1YBR279W PHB1P40961 287 aa1.3□□□□□ -2.2
PAF1YBR279W RBL2P48606 106 aaKnown RBP1.3□□□□□ -2.2
PAF1YBR279W PRM3Q08931 133 aa1.3□□□□□ -2.2
PAF1YBR279W YDR366CP87287 132 aa1.29□□□□□ -2.2
PAF1YBR279W SLO1Q3E784 85 aa1.29□□□□□ -2.2
PAF1YBR279W YLR361C-AQ3E795 98 aa1.29□□□□□ -2.2
PAF1YBR279W MDS3P53094 1487 aa1.29□□□□□ -2.2
PAF1YBR279W YGL014C-AP0C5N1 53 aa1.28□□□□□ -2.2
PAF1YBR279W PRS3P38689 320 aaKnown RBP1.28□□□□□ -2.2
PAF1YBR279W DYN2Q02647 92 aa1.28□□□□□ -2.2
PAF1YBR279W CSN9Q03981 162 aa1.28□□□□□ -2.2
PAF1YBR279W COX5BP00425 151 aa1.27□□□□□ -2.21
PAF1YBR279W RPC19P28000 142 aaKnown RBP1.27□□□□□ -2.21
PAF1YBR279W DIE2P50076 525 aa1.27□□□□□ -2.21
PAF1YBR279W YGR039WP53225 103 aa1.27□□□□□ -2.21
PAF1YBR279W YCL001W-AP87012 153 aa1.27□□□□□ -2.21
PAF1YBR279W COF1Q03048 143 aaKnown RBP1.27□□□□□ -2.21
PAF1YBR279W RAF1Q06891 181 aa1.27□□□□□ -2.21
PAF1YBR279W SPC3Q12133 184 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms