RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C HPA2Q06592 156 aa2.41□□□□□ -2.02
RIF1YBR275C RPS25BP0C0T4 108 aaKnown RBP2.41□□□□□ -2.02
RIF1YBR275C YMR31P19955 123 aa2.41□□□□□ -2.02
RIF1YBR275C ATG22P25568 528 aa2.41□□□□□ -2.02
RIF1YBR275C GAR1P28007 205 aaKnown RBP2.41□□□□□ -2.02
RIF1YBR275C MIC12P38341 106 aa2.41□□□□□ -2.02
RIF1YBR275C AIM19P40502 157 aa2.41□□□□□ -2.02
RIF1YBR275C FIP1P45976 327 aa2.41□□□□□ -2.02
RIF1YBR275C RPS25AQ3E792 108 aaPredicted RBP2.41□□□□□ -2.02
RIF1YBR275C YHR213W-AQ8TGT4 77 aa2.41□□□□□ -2.02
RIF1YBR275C POR1P04840 283 aaKnown RBP2.4□□□□□ -2.02
RIF1YBR275C DBR1P24309 405 aaKnown RBP2.4□□□□□ -2.02
RIF1YBR275C YCR041WP37265 110 aa2.4□□□□□ -2.02
RIF1YBR275C YER187WP40102 141 aa2.4□□□□□ -2.02
RIF1YBR275C MIC27P50945 234 aa2.4□□□□□ -2.02
RIF1YBR275C MPP6P53725 186 aaPredicted RBP2.4□□□□□ -2.02
RIF1YBR275C DAD4P69851 72 aa2.4□□□□□ -2.02
RIF1YBR275C YPL229WQ99395 206 aa2.4□□□□□ -2.02
RIF1YBR275C MRP10O75012 95 aa2.4□□□□□ -2.02
RIF1YBR275C SEC4P07560 215 aaKnown RBP2.4□□□□□ -2.02
RIF1YBR275C AQY2P0CD90 149 aa2.4□□□□□ -2.02
RIF1YBR275C RPL42AP0CX27 106 aaKnown RBP2.4□□□□□ -2.02
RIF1YBR275C RPL42BP0CX28 106 aaKnown RBP2.4□□□□□ -2.02
RIF1YBR275C SPO13P23624 291 aa2.4□□□□□ -2.02
RIF1YBR275C ORM1P53224 222 aa2.4□□□□□ -2.02
RIF1YBR275C TIM18Q08749 192 aa2.4□□□□□ -2.02
RIF1YBR275C YPR063CQ12160 140 aa2.4□□□□□ -2.02
RIF1YBR275C ADH5P38113 351 aaKnown RBP2.4□□□□□ -2.03
RIF1YBR275C SPL2P38839 148 aa2.4□□□□□ -2.03
RIF1YBR275C TAD2P47058 250 aa2.4□□□□□ -2.03
RIF1YBR275C AIM34Q03673 198 aa2.4□□□□□ -2.03
RIF1YBR275C FLO9P39712 1322 aa2.4□□□□□ -2.03
RIF1YBR275C OST2P46964 130 aa2.4□□□□□ -2.03
RIF1YBR275C NMA1Q06178 401 aaKnown RBP2.4□□□□□ -2.03
RIF1YBR275C RDL1Q12305 139 aaKnown RBP2.4□□□□□ -2.03
RIF1YBR275C LAC1P28496 418 aa2.4□□□□□ -2.03
RIF1YBR275C RPL32P38061 130 aaKnown RBP2.4□□□□□ -2.03
RIF1YBR275C SAD1P43589 448 aa2.4□□□□□ -2.03
RIF1YBR275C GPI2P46961 280 aa2.4□□□□□ -2.03
RIF1YBR275C PBA1Q05778 276 aa2.4□□□□□ -2.03
RIF1YBR275C DIF1O13577 133 aa2.39□□□□□ -2.03
RIF1YBR275C YBL039W-BP0C268 59 aa2.39□□□□□ -2.03
RIF1YBR275C UBC4P15731 148 aa2.39□□□□□ -2.03
RIF1YBR275C YAR029WP39549 74 aa2.39□□□□□ -2.03
RIF1YBR275C VMR1P38735 1592 aa2.39□□□□□ -2.03
RIF1YBR275C GCN3P14741 305 aa2.39□□□□□ -2.03
RIF1YBR275C MRPL28P36527 147 aa2.39□□□□□ -2.03
RIF1YBR275C YHR140WP38842 239 aa2.39□□□□□ -2.03
RIF1YBR275C PCP1P53259 346 aa2.39□□□□□ -2.03
RIF1YBR275C TVP15Q03860 143 aa2.39□□□□□ -2.03
RIF1YBR275C YOR072WQ08486 104 aa2.39□□□□□ -2.03
RIF1YBR275C YOR072W-BQ3E832 53 aa2.39□□□□□ -2.03
RIF1YBR275C HSP150P32478 413 aa2.39□□□□□ -2.03
RIF1YBR275C AIM20P40451 204 aa2.39□□□□□ -2.03
RIF1YBR275C COA6Q3E846 104 aa2.39□□□□□ -2.03
RIF1YBR275C YHR214C-EQ8TGK0 99 aa2.39□□□□□ -2.03
RIF1YBR275C MLP2P40457 1679 aa2.39□□□□□ -2.03
RIF1YBR275C DAT1P13483 248 aaKnown RBP2.39□□□□□ -2.03
RIF1YBR275C DOC1P53068 250 aa2.39□□□□□ -2.03
RIF1YBR275C KTI12P34253 313 aaKnown RBP2.38□□□□□ -2.03
RIF1YBR275C CBT1P36038 271 aaPredicted RBP2.38□□□□□ -2.03
RIF1YBR275C YIL086CP40503 102 aa2.38□□□□□ -2.03
RIF1YBR275C GIS2P53849 153 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RIF1YBR275C MRL1Q06815 381 aa2.38□□□□□ -2.03
RIF1YBR275C TIM12P32830 109 aa2.38□□□□□ -2.03
RIF1YBR275C YDR274CP87283 123 aa2.38□□□□□ -2.03
RIF1YBR275C PAL1Q05518 499 aaKnown RBP2.38□□□□□ -2.03
RIF1YBR275C RNH202Q05635 350 aa2.38□□□□□ -2.03
RIF1YBR275C DGA1Q08650 418 aa2.38□□□□□ -2.03
RIF1YBR275C FIT2Q08906 153 aa2.38□□□□□ -2.03
RIF1YBR275C ROX3P25046 220 aa2.38□□□□□ -2.03
RIF1YBR275C PPQ1P32945 549 aa2.38□□□□□ -2.03
RIF1YBR275C RAD28Q12021 506 aa2.38□□□□□ -2.03
RIF1YBR275C RPS27AP35997 82 aaKnown RBP2.38□□□□□ -2.03
RIF1YBR275C RPS27BP38711 82 aa2.38□□□□□ -2.03
RIF1YBR275C GPI14P47088 403 aaKnown RBP2.38□□□□□ -2.03
RIF1YBR275C DYN2Q02647 92 aa2.38□□□□□ -2.03
RIF1YBR275C SET6Q12529 373 aa2.38□□□□□ -2.03
RIF1YBR275C YGL010WP25338 174 aa2.38□□□□□ -2.03
RIF1YBR275C POP3P53833 195 aaPredicted RBP2.38□□□□□ -2.03
RIF1YBR275C YPR013CQ12145 317 aa2.38□□□□□ -2.03
RIF1YBR275C PAU1P0CE88 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU14P0CE89 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU6P0CE90 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU18P0CE91 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU8P0CE92 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU11P0CE93 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU13P38725 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU4P53427 120 aa2.37□□□□□ -2.03
RIF1YBR275C YNL058CP53947 316 aa2.37□□□□□ -2.03
RIF1YBR275C PAU10Q03050 120 aa2.37□□□□□ -2.03
RIF1YBR275C PAU20Q08322 120 aa2.37□□□□□ -2.03
RIF1YBR275C CCW12Q12127 133 aa2.37□□□□□ -2.03
RIF1YBR275C DFM1Q12743 341 aaKnown RBP2.37□□□□□ -2.03
RIF1YBR275C PAU9Q3E770 120 aa2.37□□□□□ -2.03
RIF1YBR275C RPS11AP0CX47 156 aaKnown RBP2.37□□□□□ -2.03
RIF1YBR275C RPS11BP0CX48 156 aaKnown RBP2.37□□□□□ -2.03
RIF1YBR275C PRE1P22141 198 aaKnown RBP2.37□□□□□ -2.03
RIF1YBR275C ERG28P40030 148 aa2.37□□□□□ -2.03
RIF1YBR275C YMR141CP40211 102 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms