RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ADH5P38113 351 aaKnown RBP5.63□□□□□ -1.51
TDP1YBR223C LSM2P38203 95 aaKnown RBP5.63□□□□□ -1.51
TDP1YBR223C GLC8P41818 229 aa5.63□□□□□ -1.51
TDP1YBR223C YIP1P53039 248 aa5.63□□□□□ -1.51
TDP1YBR223C COX18P53239 316 aa5.63□□□□□ -1.51
TDP1YBR223C TRI1Q05024 226 aa5.63□□□□□ -1.51
TDP1YBR223C NAT5Q08689 176 aa5.63□□□□□ -1.51
TDP1YBR223C MRS1P07266 363 aa5.63□□□□□ -1.51
TDP1YBR223C SEC4P07560 215 aaKnown RBP5.63□□□□□ -1.51
TDP1YBR223C PAU16P35994 123 aa5.63□□□□□ -1.51
TDP1YBR223C YPT10P38146 199 aa5.63□□□□□ -1.51
TDP1YBR223C HST4P53688 370 aa5.63□□□□□ -1.51
TDP1YBR223C SUR7P54003 302 aa5.63□□□□□ -1.51
TDP1YBR223C WTM2Q12206 467 aa5.63□□□□□ -1.51
TDP1YBR223C YPR014CQ6B0W2 109 aa5.63□□□□□ -1.51
TDP1YBR223C TOR2P32600 2474 aaKnown RBP5.62□□□□□ -1.51
TDP1YBR223C COX2P00410 251 aa5.62□□□□□ -1.51
TDP1YBR223C HEM13P11353 328 aaKnown RBP5.62□□□□□ -1.51
TDP1YBR223C ZRT1P32804 376 aa5.62□□□□□ -1.51
TDP1YBR223C YKL102CP34249 101 aa5.62□□□□□ -1.51
TDP1YBR223C PRE5P40302 234 aaKnown RBP5.62□□□□□ -1.51
TDP1YBR223C YFL054CP43549 646 aa5.62□□□□□ -1.51
TDP1YBR223C SDS23P53172 527 aa5.62□□□□□ -1.51
TDP1YBR223C MIX17Q03667 156 aa5.62□□□□□ -1.51
TDP1YBR223C CNL1Q06333 122 aa5.62□□□□□ -1.51
TDP1YBR223C CSM4Q08955 156 aa5.62□□□□□ -1.51
TDP1YBR223C AYT1Q12226 474 aa5.62□□□□□ -1.51
TDP1YBR223C JID1Q12350 301 aa5.62□□□□□ -1.51
TDP1YBR223C IES6P32617 166 aa5.61□□□□□ -1.51
TDP1YBR223C YKR045CP36138 183 aa5.61□□□□□ -1.51
TDP1YBR223C RRT1P38192 103 aa5.61□□□□□ -1.51
TDP1YBR223C TEM1P38987 245 aa5.61□□□□□ -1.51
TDP1YBR223C SEC72P39742 193 aaKnown RBP5.61□□□□□ -1.51
TDP1YBR223C YGL118CP53132 145 aa5.61□□□□□ -1.51
TDP1YBR223C YGR045CP53229 120 aa5.61□□□□□ -1.51
TDP1YBR223C TPT1Q12272 230 aaKnown RBP5.61□□□□□ -1.51
TDP1YBR223C ATO3Q12359 275 aa5.61□□□□□ -1.51
TDP1YBR223C WIP1Q2V2P8 89 aa5.61□□□□□ -1.51
TDP1YBR223C YCL048W-AQ2V2Q2 79 aa5.61□□□□□ -1.51
TDP1YBR223C ADE8P04161 214 aa5.6□□□□□ -1.51
TDP1YBR223C FZF1P32805 299 aa5.6□□□□□ -1.51
TDP1YBR223C GSP1P32835 219 aaKnown RBP5.6□□□□□ -1.51
TDP1YBR223C GSP2P32836 220 aaKnown RBP5.6□□□□□ -1.51
TDP1YBR223C TIR2P33890 251 aa5.6□□□□□ -1.51
TDP1YBR223C YGR151CP53287 111 aa5.6□□□□□ -1.51
TDP1YBR223C RXT3Q07458 294 aa5.6□□□□□ -1.51
TDP1YBR223C RKI1Q12189 258 aa5.6□□□□□ -1.51
TDP1YBR223C MRPL31P14063 131 aaPredicted RBP5.59□□□□□ -1.51
TDP1YBR223C GPI18P38211 433 aa5.59□□□□□ -1.51
TDP1YBR223C YFR045WP43617 309 aa5.59□□□□□ -1.51
TDP1YBR223C YJL028WP47062 111 aa5.59□□□□□ -1.51
TDP1YBR223C YDR215CQ12240 137 aa5.59□□□□□ -1.51
TDP1YBR223C TRA1P38811 3744 aa5.59□□□□□ -1.51
TDP1YBR223C DDI2P0CH63 225 aa5.59□□□□□ -1.52
TDP1YBR223C DDI3P0CH64 225 aa5.59□□□□□ -1.52
TDP1YBR223C RPL23AP0CX41 137 aaKnown RBP5.59□□□□□ -1.52
TDP1YBR223C RPL23BP0CX42 137 aaKnown RBP5.59□□□□□ -1.52
TDP1YBR223C PAU7P39545 55 aa5.59□□□□□ -1.52
TDP1YBR223C YJL213WP40896 331 aa5.59□□□□□ -1.52
TDP1YBR223C YJL163CP46996 555 aa5.59□□□□□ -1.52
TDP1YBR223C YNL234WP53857 426 aa5.59□□□□□ -1.52
TDP1YBR223C DAD4P69851 72 aa5.59□□□□□ -1.52
TDP1YBR223C SNA4Q07549 140 aa5.59□□□□□ -1.52
TDP1YBR223C DAD1Q12248 94 aa5.59□□□□□ -1.52
TDP1YBR223C RPL31BP0C2H9 113 aaKnown RBP5.58□□□□□ -1.52
TDP1YBR223C HAP3P13434 144 aa5.58□□□□□ -1.52
TDP1YBR223C GZF3P42944 551 aaKnown RBP5.58□□□□□ -1.52
TDP1YBR223C ARC18Q05933 178 aaKnown RBP5.58□□□□□ -1.52
TDP1YBR223C FSF1Q12029 327 aaKnown RBP5.58□□□□□ -1.52
TDP1YBR223C WSC3Q12215 556 aa5.58□□□□□ -1.52
TDP1YBR223C HTB2P02294 131 aa5.57□□□□□ -1.52
TDP1YBR223C RPL31AP0C2H8 113 aaKnown RBP5.57□□□□□ -1.52
TDP1YBR223C YHR213WP0CI67 198 aa5.57□□□□□ -1.52
TDP1YBR223C UIP3P39547 235 aa5.57□□□□□ -1.52
TDP1YBR223C CSI2Q08054 341 aa5.57□□□□□ -1.52
TDP1YBR223C YDL157CQ12082 118 aa5.57□□□□□ -1.52
TDP1YBR223C FCY1Q12178 158 aa5.57□□□□□ -1.52
TDP1YBR223C MDM10P18409 493 aa5.56□□□□□ -1.52
TDP1YBR223C MRPL20P22354 195 aaPredicted RBP5.56□□□□□ -1.52
TDP1YBR223C MBB1P39534 108 aa5.56□□□□□ -1.52
TDP1YBR223C THG1P53215 237 aaKnown RBP5.56□□□□□ -1.52
TDP1YBR223C ATG33Q06485 197 aa5.56□□□□□ -1.52
TDP1YBR223C CYC3P06182 269 aa5.56□□□□□ -1.52
TDP1YBR223C SPS100P13130 326 aa5.56□□□□□ -1.52
TDP1YBR223C MIG1P27705 504 aa5.56□□□□□ -1.52
TDP1YBR223C MRPL38P35996 138 aaPredicted RBP5.56□□□□□ -1.52
TDP1YBR223C YNL200CP40165 246 aaKnown RBP5.56□□□□□ -1.52
TDP1YBR223C YMR141CP40211 102 aa5.56□□□□□ -1.52
TDP1YBR223C HAC1P41546 238 aa5.56□□□□□ -1.52
TDP1YBR223C PAU23Q07987 124 aa5.56□□□□□ -1.52
TDP1YBR223C PAU17Q12370 124 aa5.56□□□□□ -1.52
TDP1YBR223C PHO85P17157 305 aa5.55□□□□□ -1.52
TDP1YBR223C YCR007CP25354 239 aa5.55□□□□□ -1.52
TDP1YBR223C YPS1P32329 569 aa5.55□□□□□ -1.52
TDP1YBR223C IMP2P46972 177 aa5.55□□□□□ -1.52
TDP1YBR223C BRP1P53194 125 aa5.55□□□□□ -1.52
TDP1YBR223C GTO3Q04806 366 aa5.55□□□□□ -1.52
TDP1YBR223C ADH6Q04894 360 aaKnown RBP5.55□□□□□ -1.52
TDP1YBR223C MSC3Q05812 728 aa5.55□□□□□ -1.52
TDP1YBR223C IRC23Q08416 157 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms