RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIF2	YBR103W	USB1	Q12208	290 aa	Known RBP	4.19	□□□□□ -1.74
SIF2	YBR103W	HEM4	P06174	275 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	CUP2	P15315	225 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	STE18	P18852	110 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	COX10	P21592	462 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	ERG24	P32462	438 aa	Known RBP	4.18	□□□□□ -1.74
SIF2	YBR103W	MIC12	P38341	106 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	TEM1	P38987	245 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	YFL015C	P43578	164 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	ECO1	P43605	281 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	PGU1	P47180	361 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	YNR048W	P53740	393 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	PGA1	P53896	198 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	INP1	Q03694	420 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	TRA1	P38811	3744 aa		4.18	□□□□□ -1.74
SIF2	YBR103W	FMP49	A0A023PZB3	126 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	MRS1	P07266	363 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	CHO1	P08456	276 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	ARF1	P11076	181 aa	Known RBP	4.17	□□□□□ -1.74
SIF2	YBR103W	SEC11	P15367	167 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	SRP21	P32342	167 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	HSP150	P32478	413 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	FLO5	P38894	1075 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	YND1	P40009	630 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	YJL213W	P40896	331 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	OST2	P46964	130 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	MIC27	P50945	234 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	YNR064C	P53750	290 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	IZH1	Q03419	316 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	GRH1	Q04410	372 aa	Known RBP	4.17	□□□□□ -1.74
SIF2	YBR103W	RIM9	Q04734	239 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	ODC2	Q99297	307 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	CDC39	P25655	2108 aa	Known RBP	4.17	□□□□□ -1.74
SIF2	YBR103W	HMRA1	P0CY11	126 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	MRPL20	P22354	195 aa	Predicted RBP	4.17	□□□□□ -1.74
SIF2	YBR103W	SCO1	P23833	295 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	YGR039W	P53225	103 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	YFH1	Q07540	174 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	HNT3	Q08702	217 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	YPL264C	Q08980	353 aa		4.17	□□□□□ -1.74
SIF2	YBR103W	FLO9	P39712	1322 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	YER039C-A	P0CD97	72 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	SPS18	P32572	300 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	ARC40	P38328	384 aa	Known RBP	4.16	□□□□□ -1.74
SIF2	YBR103W	VHS2	P40463	436 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	YJL028W	P47062	111 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	BAT2	P47176	376 aa	Known RBP	4.16	□□□□□ -1.74
SIF2	YBR103W	YIP1	P53039	248 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	RAV2	Q03956	351 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	NMA1	Q06178	401 aa	Known RBP	4.16	□□□□□ -1.74
SIF2	YBR103W	ATO3	Q12359	275 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	ATG40	Q99325	256 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	UBA3	Q99344	299 aa		4.16	□□□□□ -1.74
SIF2	YBR103W	YHR214C-D	P0CX93	97 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	CDC43	P18898	376 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	SDS24	P38314	527 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	MBB1	P39534	108 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	YFR045W	P43617	309 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	GON7	P46984	123 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	TOS2	P50078	622 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	RPL21A	Q02753	160 aa	Known RBP	4.15	□□□□□ -1.74
SIF2	YBR103W	DGA1	Q08650	418 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	RPL21B	Q12672	160 aa	Known RBP	4.15	□□□□□ -1.74
SIF2	YBR103W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.15	□□□□□ -1.74
SIF2	YBR103W	YCR024C-B	Q3E7Z8	88 aa		4.15	□□□□□ -1.74
SIF2	YBR103W	NHP2	P32495	156 aa	Predicted RBP	4.14	□□□□□ -1.75
SIF2	YBR103W	GPX1	P36014	167 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	YGP1	P38616	354 aa	Known RBP	4.14	□□□□□ -1.75
SIF2	YBR103W	ECM34	P38728	170 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	ARP3	P47117	449 aa	Known RBP	4.14	□□□□□ -1.75
SIF2	YBR103W	AIM11	P87275	137 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	YMR090W	Q04304	227 aa	Known RBP	4.14	□□□□□ -1.75
SIF2	YBR103W	NAT3	Q06504	195 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	SYM1	Q06563	197 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	YOR105W	Q08504	108 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	SCS22	Q6Q595	175 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	BLM10	P43583	2143 aa		4.14	□□□□□ -1.75
SIF2	YBR103W	PHO85	P17157	305 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	FUN19	P28003	413 aa	Predicted RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	VMA11	P32842	164 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	ECM15	P35195	104 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	SWD2	P36104	329 aa	Predicted RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	YFR054C	P43622	192 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	SBH1	P52870	82 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	YGL118C	P53132	145 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	MIX14	Q04341	121 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	RRG8	Q06109	277 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	YBL112C	Q3E7Y4	105 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	KTI11	Q3E840	82 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	RPL12A	P0CX53	165 aa	Known RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	RPL12B	P0CX54	165 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	INO2	P26798	304 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	ECM14	P38836	430 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	YNL208W	P40159	199 aa	Known RBP	4.13	□□□□□ -1.75
SIF2	YBR103W	XBP1	P40489	647 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	REE1	P40893	198 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	CWP2	P43497	92 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	YIP5	P53108	310 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	SDC1	Q03323	175 aa		4.13	□□□□□ -1.75
SIF2	YBR103W	YMR082C	Q04276	118 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms