RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	YHR125W	P38831	101 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	YOR385W	Q08909	290 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	LTE1	P07866	1435 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	CPA1	P07258	411 aa	Known RBP	5.31	□□□□□ -1.56
UBP13	YBL067C	ARC15	P40518	154 aa	RIP-Chip data	5.31	□□□□□ -1.56	not detected
UBP13	YBL067C	ECO1	P43605	281 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	YFR035C	P43608	114 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	YLR281C	Q05863	155 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	GPI11	Q06636	219 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	KSH1	Q8TGJ3	72 aa		5.31	□□□□□ -1.56
UBP13	YBL067C	COX4	P04037	155 aa		5.3	□□□□□ -1.56
UBP13	YBL067C	TVP23	P38962	199 aa		5.3	□□□□□ -1.56
UBP13	YBL067C	RAD6	P06104	172 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	GTT1	P40582	234 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	DOC1	P53068	250 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	YOR381W-A	Q3E804	55 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	PDR10	P51533	1564 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	YLR422W	Q06409	1932 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	YCR043C	P25361	127 aa		5.29	□□□□□ -1.56
UBP13	YBL067C	TMA19	P35691	167 aa	Known RBP	5.29	□□□□□ -1.56
UBP13	YBL067C	RRT13	P40042	185 aa		5.28	□□□□□ -1.56
UBP13	YBL067C	YFR045W	P43617	309 aa		5.28	□□□□□ -1.56
UBP13	YBL067C	ADH3	P07246	375 aa	Known RBP	5.28	□□□□□ -1.56
UBP13	YBL067C	PHO88	P38264	188 aa	Predicted RBP	5.28	□□□□□ -1.56
UBP13	YBL067C	YIR035C	P40579	254 aa		5.28	□□□□□ -1.56
UBP13	YBL067C	REE1	P40893	198 aa		5.28	□□□□□ -1.56
UBP13	YBL067C	SCS22	Q6Q595	175 aa		5.28	□□□□□ -1.56
UBP13	YBL067C	MIC10	Q96VH5	97 aa		5.28	□□□□□ -1.56
UBP13	YBL067C	SPT6	P23615	1451 aa	Known RBP	5.28	□□□□□ -1.56
UBP13	YBL067C	UMP1	P38293	148 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	IGD1	P43598	195 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	KNH1	P50112	268 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	ERG25	P53045	309 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	YGR164W	P53291	111 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	YDR029W	Q12111	104 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	FLO11	P08640	1367 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	SDH3	P33421	198 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	YEL073C	P39974	107 aa		5.27	□□□□□ -1.57
UBP13	YBL067C	SWC7	Q06707	132 aa		5.26	□□□□□ -1.57
UBP13	YBL067C	YDL241W	Q07738	123 aa		5.26	□□□□□ -1.57
UBP13	YBL067C	FIT3	Q08907	204 aa		5.26	□□□□□ -1.57
UBP13	YBL067C	RAD10	P06838	210 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	YHR032W-A	P0C5N6	59 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	YCR099C	P25657	155 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	YKL044W	P36092	106 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	SNF11	P38956	169 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	CAX4	P53223	239 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	HAL1	Q01766	294 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	PBA1	Q05778	276 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	ATG10	Q07879	167 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	RAS2	P01120	322 aa	Known RBP	5.25	□□□□□ -1.57
UBP13	YBL067C	YNL217W	P40152	326 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	LIP1	Q03579	150 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	UIP4	Q08926	304 aa		5.25	□□□□□ -1.57
UBP13	YBL067C	CLB6	P32943	380 aa		5.24	□□□□□ -1.57
UBP13	YBL067C	ASK1	P35734	292 aa		5.24	□□□□□ -1.57
UBP13	YBL067C	RRT7	Q07829	113 aa		5.24	□□□□□ -1.57
UBP13	YBL067C	RRT15	Q3E811	62 aa		5.24	□□□□□ -1.57
UBP13	YBL067C	LYS2	P07702	1392 aa		5.24	□□□□□ -1.57
UBP13	YBL067C	HPA3	P39979	161 aa		5.24	□□□□□ -1.57
UBP13	YBL067C	PTH1	P38876	190 aa	Known RBP	5.23	□□□□□ -1.57
UBP13	YBL067C	SCW4	P53334	386 aa	Known RBP	5.23	□□□□□ -1.57
UBP13	YBL067C	MRPS8	Q03799	155 aa		5.23	□□□□□ -1.57
UBP13	YBL067C	SHH3	Q04487	196 aa		5.23	□□□□□ -1.57
UBP13	YBL067C	DSK2	P48510	373 aa		5.23	□□□□□ -1.57
UBP13	YBL067C	MZM1	Q03429	123 aa	Predicted RBP	5.23	□□□□□ -1.57
UBP13	YBL067C	SRB6	P32570	121 aa		5.22	□□□□□ -1.57
UBP13	YBL067C	MID2	P36027	376 aa		5.22	□□□□□ -1.57
UBP13	YBL067C	MRPL27	P36526	146 aa	Predicted RBP	5.22	□□□□□ -1.57
UBP13	YBL067C	PIR5	P46999	287 aa		5.22	□□□□□ -1.57
UBP13	YBL067C	YMR082C	Q04276	118 aa		5.22	□□□□□ -1.57
UBP13	YBL067C	YMR090W	Q04304	227 aa	Known RBP	5.22	□□□□□ -1.57
UBP13	YBL067C	IRC25	Q07951	179 aa		5.22	□□□□□ -1.57
UBP13	YBL067C	FAS1	P07149	2051 aa	Known RBP	5.22	□□□□□ -1.57
UBP13	YBL067C	GEA2	P39993	1459 aa	Known RBP	5.22	□□□□□ -1.57
UBP13	YBL067C	UBC4	P15731	148 aa		5.21	□□□□□ -1.57
UBP13	YBL067C	YGL010W	P25338	174 aa		5.21	□□□□□ -1.57
UBP13	YBL067C	IPT1	P38954	527 aa		5.21	□□□□□ -1.57
UBP13	YBL067C	FLX1	P40464	311 aa		5.21	□□□□□ -1.57
UBP13	YBL067C	YOR268C	Q08734	132 aa		5.21	□□□□□ -1.57
UBP13	YBL067C	COX5B	P00425	151 aa		5.21	□□□□□ -1.58
UBP13	YBL067C	MIG1	P27705	504 aa		5.21	□□□□□ -1.58
UBP13	YBL067C	YML122C	Q03207	126 aa		5.21	□□□□□ -1.58
UBP13	YBL067C	YOR015W	Q12169	119 aa		5.21	□□□□□ -1.58
UBP13	YBL067C	CAT8	P39113	1433 aa		5.2	□□□□□ -1.58
UBP13	YBL067C	FZF1	P32805	299 aa		5.2	□□□□□ -1.58
UBP13	YBL067C	RPL13B	P40212	199 aa	Known RBP	5.2	□□□□□ -1.58
UBP13	YBL067C	YIL054W	P40524	105 aa		5.2	□□□□□ -1.58
UBP13	YBL067C	FIT1	Q04433	528 aa		5.2	□□□□□ -1.58
UBP13	YBL067C	ADE6	P38972	1358 aa	Known RBP	5.2	□□□□□ -1.58
UBP13	YBL067C	THO2	P53552	1597 aa	Known RBP	5.2	□□□□□ -1.58
UBP13	YBL067C	YEL045C	P32616	141 aa		5.2	□□□□□ -1.58
UBP13	YBL067C	YNR077C	P53758	84 aa		5.19	□□□□□ -1.58
UBP13	YBL067C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.19	□□□□□ -1.58
UBP13	YBL067C	FKS1	P38631	1876 aa	Known RBP	5.19	□□□□□ -1.58
UBP13	YBL067C	INO4	P13902	151 aa		5.19	□□□□□ -1.58
UBP13	YBL067C	YPL067C	Q02754	198 aa		5.19	□□□□□ -1.58
UBP13	YBL067C	YLR365W	Q7LIF2	110 aa		5.19	□□□□□ -1.58
UBP13	YBL067C	MRPL11	P36521	249 aa	Predicted RBP	5.18	□□□□□ -1.58
UBP13	YBL067C	TDA2	P40045	126 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms