RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 LIMD1Q9UGP4 676 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 CDH22Q9UJ99 828 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 SAR1BQ9Y6B6 198 aa18.35■□□□□ 0.53
PHGDH-234ENST00000642041 A0A087X0T9 212 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 CES2O00748 559 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 ABLIM1O14639 778 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 FAM189A1O60320 539 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 RTN2O75298 545 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 STAU1O95793 577 aaKnown RBP18.34■□□□□ 0.53
PHGDH-234ENST00000642041 FAM228BP0C875 321 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 GRM5P41594 1212 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 GATMP50440 423 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 NAP1L1P55209 391 aaKnown RBP18.34■□□□□ 0.53
PHGDH-234ENST00000642041 CYP27A1Q02318 531 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 NCOA4Q13772 614 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 LLGL2Q6P1M3 1020 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 SLC27A1Q6PCB7 646 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 SLC35F6Q8N357 371 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 PLCD3Q8N3E9 789 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 DNAJB3Q8WWF6 145 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 CASP10Q92851 521 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 ZBTB45Q96K62 511 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-234ENST00000642041 CDT1Q9H211 546 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 MRFAP1Q9Y605 127 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 USP24Q9UPU5 2620 aa18.34■□□□□ 0.53
PHGDH-234ENST00000642041 PLEKP08567 350 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-234ENST00000642041 MYBL1P10243 752 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
PHGDH-234ENST00000642041 CD52P31358 61 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 MTHFRP42898 656 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 HADHBP55084 474 aaKnown RBP18.33■□□□□ 0.52
PHGDH-234ENST00000642041 MRPS6P82932 125 aaKnown RBP18.33■□□□□ 0.52
PHGDH-234ENST00000642041 SPOUT1Q5T280 376 aaKnown RBP18.33■□□□□ 0.52
PHGDH-234ENST00000642041 CATSPER4Q7RTX7 472 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 TDRD5Q8NAT2 981 aaKnown RBP18.33■□□□□ 0.52
PHGDH-234ENST00000642041 ADAMTS10Q9H324 1103 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 VRTNQ9H8Y1 702 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 CYP3A43Q9HB55 503 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 CHST12Q9NRB3 414 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 LRFN2Q9ULH4 789 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 CNTN6Q9UQ52 1028 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 LZTS1Q9Y250 596 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 TRPV2Q9Y5S1 764 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 CDY2AQ9Y6F7 541 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 SQORQ9Y6N5 450 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 R4GN57 208 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 GPR179Q6PRD1 2367 aa18.33■□□□□ 0.52
PHGDH-234ENST00000642041 ZNF263O14978 683 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 ASS1P00966 412 aaKnown RBP18.32■□□□□ 0.52
PHGDH-234ENST00000642041 CDR2Q01850 454 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 CUL2Q13617 745 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 AMHR2Q16671 573 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 KIZQ2M2Z5 673 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 PLPP4Q5VZY2 271 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 CCDC70Q6NSX1 233 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 TRAPPC11Q7Z392 1133 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 THNSL1Q8IYQ7 743 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 UBXN4Q92575 508 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 VCPIP1Q96JH7 1222 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 GPR88Q9GZN0 384 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 ISCUQ9H1K1 167 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 ITGA11Q9UKX5 1188 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 NENFQ9UMX5 172 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 USTQ9Y2C2 406 aa18.32■□□□□ 0.52
PHGDH-234ENST00000642041 TSPAN1O60635 241 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 GPR32O75388 356 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 ARF4P18085 180 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-234ENST00000642041 SDHBP21912 280 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 PAX3P23760 479 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 TDRD10Q5VZ19 366 aaKnown RBP18.31■□□□□ 0.52
PHGDH-234ENST00000642041 DCLK2Q8N568 766 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 ZNF516Q92618 1163 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 SEMA4DQ92854 862 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 WDR24Q96S15 920 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 PPP1R16BQ96T49 567 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 SYT11Q9BT88 431 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 CELF4Q9BZC1 486 aaKnown RBP18.31■□□□□ 0.52
PHGDH-234ENST00000642041 ZNF518BQ9C0D4 1074 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 HAPLN2Q9GZV7 340 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 LACRTQ9GZZ8 138 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 PDZD7Q9H5P4 517 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 NGRNQ9NPE2 291 aaKnown RBP18.31■□□□□ 0.52
PHGDH-234ENST00000642041 KIAA1257Q9ULG3 409 aa18.31■□□□□ 0.52
PHGDH-234ENST00000642041 HIDE1A8MVS5 230 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 CYP11B1P15538 503 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 MCM3P25205 808 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 USP8P40818 1118 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 NOP14P78316 857 aaKnown RBP18.3■□□□□ 0.52
PHGDH-234ENST00000642041 GPC5P78333 572 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 TMEM62Q0P6H9 643 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 ZC3H14Q6PJT7 736 aaKnown RBP18.3■□□□□ 0.52
PHGDH-234ENST00000642041 ARHGEF19Q8IW93 802 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 COLGALT1Q8NBJ5 622 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 RFFLQ8WZ73 363 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 OSMRQ99650 979 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 TRIM6Q9C030 488 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-234ENST00000642041 NIF3L1Q9GZT8 377 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 ERVK-5Q9HDB9 667 aa18.3■□□□□ 0.52
PHGDH-234ENST00000642041 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms