RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 PCDHGC5Q9Y5F6 944 aa18.18■□□□□ 0.5
RPRD1A-209ENST00000590898 FHOD1Q9Y613 1164 aa18.18■□□□□ 0.5
RPRD1A-209ENST00000590898 MYH10P35580 1976 aa18.18■□□□□ 0.5
RPRD1A-209ENST00000590898 PTPN1P18031 435 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 KLRC2P26717 231 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 ROR1Q01973 937 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 ARHGAP44Q17R89 818 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 LILRA6Q6PI73 481 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 TMEM270Q6UE05 265 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 B3GALNT2Q8NCR0 500 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 MYCBPAPQ8TBZ2 947 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 C2orf15Q8WU43 125 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 TMEM176AQ96HP8 235 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 PKMYT1Q99640 499 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 PCDHB4Q9Y5E5 795 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 EPHB6O15197 1021 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 ADAM12O43184 909 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 PAEPP09466 180 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 ACAT1P24752 427 aaKnown RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 RAD23BP54727 409 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 DRAP1Q14919 205 aaPredicted RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 LRRTM3Q86VH5 581 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 CDX2Q99626 313 aaPredicted RBP18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 TTYH3Q9C0H2 523 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 MTMR10Q9NXD2 777 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 HSFX1Q9UBD0 423 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 MYO6Q9UM54 1294 aa18.17■□□□□ 0.5
RPRD1A-209ENST00000590898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.17■□□□□ 0.55e-8■□□□□ 10.9
RPRD1A-209ENST00000590898 REV3LO60673 3130 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 PTPRDP23468 1912 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 FOXN3O00409 490 aaPredicted RBP18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 CLASP2O75122 1294 aaKnown RBP18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 CPB1P15086 417 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 ATF2P15336 505 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 ZNF132P52740 706 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 RAPGEF1Q13905 1077 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 DUSP6Q16828 381 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 Q7L0L9 218 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 RTL10Q7L3V2 364 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 FAM71AQ8IYT1 594 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 SLC4A11Q8NBS3 891 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 KIAA1524Q8TCG1 905 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 TWNKQ96RR1 684 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 TMEM209Q96SK2 561 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 ELOVL4Q9GZR5 314 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 AFF4Q9UHB7 1163 aaKnown RBP18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 GTF3C4Q9UKN8 822 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 PLXNA3P51805 1871 aa18.16■□□□□ 0.5
RPRD1A-209ENST00000590898 A0A1W2PQJ5 194 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 WDR27A2RRH5 827 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 MYBPHLA2RUH7 354 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 HCRTO43612 131 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ZNF500O60304 480 aaPredicted RBP18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ATP2C2O75185 946 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 CSPG5O95196 566 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 CLCN4P51793 760 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 JAM2P57087 298 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 CACNA2D4Q7Z3S7 1137 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ADGRD2Q7Z7M1 963 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ACOT1Q86TX2 421 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 FMNL3Q8IVF7 1028 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 HDAC7Q8WUI4 952 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 FUBP3Q96I24 572 aaKnown RBP eCLIP18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 GPR88Q9GZN0 384 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 DPEP3Q9H4B8 488 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 NLRC4Q9NPP4 1024 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 CRTAC1Q9NQ79 661 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 HMGXB4Q9UGU5 601 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 DPP7Q9UHL4 492 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 AJAP1Q9UKB5 411 aaPredicted RBP18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 RNF225M0QZC1 329 aaPredicted RBP18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 NCK2O43639 380 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 GLUD1P00367 558 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 SKILP12757 684 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 IGFBP4P22692 258 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ADKP55263 362 aaKnown RBP18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ARPP19P56211 112 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 BPIFB4P59827 614 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 SLC39A12Q504Y0 691 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ZNF394Q53GI3 561 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 C4orf50Q6ZRC1 276 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 PALB2Q86YC2 1186 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 GLYCTKQ8IVS8 523 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 SPPL2BQ8TCT7 592 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 SLC22A17Q8WUG5 538 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 SPAG5Q96R06 1193 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 PLEKHA4Q9H4M7 779 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 ABCB6Q9NP58 842 aa18.15■□□□□ 0.5
RPRD1A-209ENST00000590898 F8VZ95 297 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 PER2O15055 1255 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 TGM5O43548 720 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 OR4Q2P0C623 313 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 KRT5P13647 590 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 NRIP1P48552 1158 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 PSMC1P62191 440 aaKnown RBP18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 KCNC3Q14003 757 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 CFAP221Q4G0U5 840 aa18.14■□□□□ 0.49
RPRD1A-209ENST00000590898 TCEAL5Q5H9L2 206 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms