RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ATRNL1Q5VV63 1379 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 CXCL8P10145 99 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 SMAD1Q15797 465 aaKnown RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 CDKL3Q8IVW4 592 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 C3orf20Q8ND61 904 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 KLHL8Q9P2G9 620 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 PIN4Q9Y237 131 aaKnown RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 LSM8O95777 96 aaKnown RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 GLRA2P23416 452 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 STILQ15468 1287 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 SPOCD1Q6ZMY3 1216 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 DMAC2Q9NW81 257 aa11.82□□□□□ -0.52
PCDHGB4-201ENST00000519479 CFAP73A6NFT4 308 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 DYNC1LI2O43237 492 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 GPD1P21695 349 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 UBA1P22314 1058 aaKnown RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 NXNQ6DKJ4 435 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZPBP2Q6X784 338 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 CATSPERGQ6ZRH7 1159 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 BRSK2Q8IWQ3 736 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 VCPIP1Q96JH7 1222 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 AGPSO00116 658 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 PSMC4P43686 418 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 MCL1Q07820 350 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 NME3Q13232 169 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 LAMC2Q13753 1193 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 ARL13BQ3SXY8 428 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 DUPD1Q68J44 220 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 PPIL6Q8IXY8 311 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 CLEC4DQ8WXI8 215 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 STAP1Q9ULZ2 295 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 ATP5HO75947 161 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 SHBGP04278 402 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 STAG3L1P0CL83 205 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 FLT3P36888 993 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 OTUD4Q01804 1114 aaKnown RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 RASGEF1CQ8N431 466 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 TUBB6Q9BUF5 446 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 PPARGC1AQ9UBK2 798 aaKnown RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 PCYOX1Q9UHG3 505 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 COG5Q9UP83 839 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 UBR2Q8IWV8 1755 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 NOVP48745 357 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 AP1B1Q10567 949 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZACNQ401N2 412 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 CRLF3Q8IUI8 442 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 RIBC1Q8N443 379 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 DDX20Q9UHI6 824 aaKnown RBP11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 TIAM2Q8IVF5 1701 aa11.81□□□□□ -0.52
PCDHGB4-201ENST00000519479 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 DNAJC3Q13217 504 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 MFSD7Q6UXD7 560 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 DAW1Q8N136 415 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 AFAP1L2Q8N4X5 818 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ACTL9Q8TC94 416 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 PGM2Q96G03 612 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZNF560Q96MR9 790 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZC3H7BQ9UGR2 993 aaKnown RBP11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 SSX2IPQ9Y2D8 614 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 CCDC195A0A1B0GUA6 201 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 UNCXA6NJT0 531 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 DDX3YO15523 660 aaKnown RBP11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 VTNP04004 478 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 HOXD13P35453 343 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ARFIP2P53365 341 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 FCGRTP55899 365 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 DAB2IPQ5VWQ8 1189 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 A0A087WZ62 844 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 H0Y3Z8 333 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 HAUS5O94927 633 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 MAP3K6O95382 1288 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 KITP10721 976 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZFXP17010 805 aaPredicted RBP11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 VGLL4Q14135 290 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZSWIM2Q8NEG5 633 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 TNIP3Q96KP6 325 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 MFSD14AQ96MC6 490 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 FDXACB1Q9BRP7 624 aaPredicted RBP11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 TLK1Q9UKI8 766 aa11.8□□□□□ -0.52
PCDHGB4-201ENST00000519479 GYG2O15488 501 aa11.79□□□□□ -0.52
PCDHGB4-201ENST00000519479 ZNF200P98182 395 aaPredicted RBP11.79□□□□□ -0.52
PCDHGB4-201ENST00000519479 RWDD4Q6NW29 188 aaKnown RBP11.79□□□□□ -0.52
PCDHGB4-201ENST00000519479 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 747.1 ms