RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SQORQ9Y6N5 450 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 ANK1P16157 1881 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 A0A0A6YYK5 440 aaPredicted RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 ATXN7O15265 892 aaPredicted RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 FANCGO15287 622 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 NPTXRO95502 500 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 CST3P01034 146 aaPredicted RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 CHRNA1P02708 482 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 NFICP08651 508 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PNMA6AP0CW24 399 aaPredicted RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 GZMAP12544 262 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 CYP11B1P15538 503 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 FGFR4P22455 802 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 GRNP28799 593 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 GSK3AP49840 483 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 ZNF132P52740 706 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 YARSP54577 528 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 OSTNP61366 133 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TFAMQ00059 246 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 ORC1Q13415 861 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TRPC3Q13507 836 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TUBB2AQ13885 445 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TMEM132DQ14C87 1099 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TCEAL1Q15170 157 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 ZBTB6Q15916 424 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PTGISQ16647 500 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TRIM71Q2Q1W2 868 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 UBXN11Q5T124 520 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 ALG1LQ6GMV1 187 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 JADE1Q6IE81 842 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 ALKBH5Q6P6C2 394 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 FAM228AQ86W67 206 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 C1orf127Q8N9H9 656 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 USP38Q8NB14 1042 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PPP1R13LQ8WUF5 828 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 DDX1Q92499 740 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 SNX27Q96L92 541 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 WDR24Q96S15 920 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 AGPAT1Q99943 283 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PI4K2AQ9BTU6 479 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDC42-205ENST00000498236 TUBB2BQ9BVA1 445 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 L2HGDHQ9H9P8 463 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PAK6Q9NQU5 681 aaPredicted RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 CNTN3Q9P232 1028 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 DNAI1Q9UI46 699 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 SIX4Q9UIU6 781 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 GUCA1BQ9UMX6 200 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PHF24Q9UPV7 400 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PIN4Q9Y237 131 aaKnown RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 GINS2Q9Y248 185 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PTPN22Q9Y2R2 807 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 TRIM17Q9Y577 477 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 NUB1Q9Y5A7 615 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 PCDHB2Q9Y5E7 798 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.19□□□□□ -1.1
CDC42-205ENST00000498236 PTCH2Q9Y6C5 1203 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 CDY2AQ9Y6F7 541 aa8.19□□□□□ -1.1
CDC42-205ENST00000498236 RALGAPA2Q2PPJ7 1873 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 A0A0U1RQG5 324 aaPredicted RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 A0A1W2PQ45 241 aaPredicted RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 A0A1W2PQY0 241 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 ANO9A1A5B4 782 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 EIF1AYO14602 144 aaKnown RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 CYP26A1O43174 497 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 XYLBO75191 536 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 RPS6KA5O75582 802 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 KCNE1P15382 129 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 HSPA6P17066 643 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 CHRNB2P17787 502 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 TNFAIP3P21580 790 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 VAMP1P23763 118 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 CASQ1P31415 396 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 PDE6CP51160 858 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 MYL6P60660 151 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 YWHAEP62258 255 aaKnown RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 CDR2Q01850 454 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 ZNF699Q32M78 642 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 FAM47CQ5HY64 1035 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 ZNF569Q5MCW4 686 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 NOP9Q86U38 636 aaKnown RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 SLC47A2Q86VL8 602 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 TTC39CQ8N584 583 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 TRIM58Q8NG06 486 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 LNX1Q8TBB1 728 aaPredicted RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 SECISBP2LQ93073 1101 aaKnown RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 WNT8BQ93098 351 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 EIF2AQ9BY44 585 aaKnown RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 BCO2Q9BYV7 579 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 TRIM6Q9C030 488 aaPredicted RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.18□□□□□ -1.11e-9■■■■■ 28.6
CDC42-205ENST00000498236 ISCUQ9H1K1 167 aa8.18□□□□□ -1.1
CDC42-205ENST00000498236 NOC2LQ9Y3T9 749 aaKnown RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 TRIP12Q14669 1992 aaPredicted RBP8.18□□□□□ -1.1
CDC42-205ENST00000498236 FRMPD3Q5JV73 1810 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 HTTP42858 3142 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 CTAGE9A4FU28 777 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 ANKRD62A6NC57 917 aa8.17□□□□□ -1.1
CDC42-205ENST00000498236 KBTBD13C9JR72 458 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms