RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 EHBP1Q8NDI1 1231 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 LMO3Q8TAP4 145 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 ADAMTS19Q8TE59 1207 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 LPIN3Q9BQK8 851 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 FUCA2Q9BTY2 467 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 WDR6Q9NNW5 1121 aaKnown RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 ABI2Q9NYB9 513 aaPredicted RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 CEP72Q9P209 647 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 DNMT3BQ9UBC3 853 aaKnown RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 PRKAG3Q9UGI9 489 aa14.46□□□□□ -0.09
COL1A1-208ENST00000494334 MTCL1Q9Y4B5 1905 aaKnown RBP14.46□□□□□ -0.09
COL1A1-208ENST00000494334 VCANP13611 3396 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 SYCE3A1L190 88 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 HAPLN1P10915 354 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-208ENST00000494334 TUFMP49411 452 aaKnown RBP14.45□□□□□ -0.1
COL1A1-208ENST00000494334 NDST1P52848 882 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 NTHL1P78549 312 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 ZP2Q05996 745 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 INCA1Q0VD86 236 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 LRMPQ12912 555 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 NFKBIBQ15653 356 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 MAPRE1Q15691 268 aaKnown RBP14.45□□□□□ -0.1
COL1A1-208ENST00000494334 MGAT5BQ3V5L5 792 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 ANO6Q4KMQ2 910 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 UNC93AQ86WB7 457 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 ADHFE1Q8IWW8 467 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 MYCBPAPQ8TBZ2 947 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 PCED1BQ96HM7 432 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 NECAB3Q96P71 396 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-208ENST00000494334 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-208ENST00000494334 HCFC1R1Q9NWW0 138 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 MAGEC2Q9UBF1 373 aaPredicted RBP14.45□□□□□ -0.1
COL1A1-208ENST00000494334 HMGXB4Q9UGU5 601 aa14.45□□□□□ -0.1
COL1A1-208ENST00000494334 KCNJ18B7U540 433 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 PTPN2P17706 415 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 CD58P19256 250 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 CYP2F1P24903 491 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 MYL5Q02045 173 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 PLD1Q13393 1074 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 ORC1Q13415 861 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 KCNJ12Q14500 433 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 NCAPHQ15003 741 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 MAN2A1Q16706 1144 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 CFAP221Q4G0U5 840 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 TCP11X2Q5H9J9 407 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 MDH1BQ5I0G3 518 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 CDKAL1Q5VV42 579 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 C4orf50Q6ZRC1 276 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 SPATA2LQ8IUW3 424 aaPredicted RBP14.44□□□□□ -0.1
COL1A1-208ENST00000494334 CRYBG2Q8N1P7 616 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 B3GALNT2Q8NCR0 500 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 WHAMMQ8TF30 809 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 FUBP3Q96I24 572 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL1A1-208ENST00000494334 RPGRIP1Q96KN7 1286 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 TNIP3Q96KP6 325 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 ZNF512Q96ME7 567 aaPredicted RBP14.44□□□□□ -0.1
COL1A1-208ENST00000494334 TWNKQ96RR1 684 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 UHRF1Q96T88 793 aaPredicted RBP14.44□□□□□ -0.1
COL1A1-208ENST00000494334 ARID3AQ99856 593 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 TUBGCP2Q9BSJ2 902 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 ABCB6Q9NP58 842 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 FANCLQ9NW38 375 aa14.44□□□□□ -0.1
COL1A1-208ENST00000494334 CLUHO75153 1309 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 LOC730098B7Z3J9 87 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 CILPO75339 1184 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 RHOP08100 348 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-208ENST00000494334 ATF6P18850 670 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 SP100P23497 879 aaPredicted RBP14.43□□□□□ -0.1
COL1A1-208ENST00000494334 EEF1GP26641 437 aaKnown RBP14.43□□□□□ -0.1
COL1A1-208ENST00000494334 GPR15P49685 360 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 EPHB3P54753 998 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 CYP27A1Q02318 531 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 CUL2Q13617 745 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 VWA3BQ502W6 1294 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 MIIPQ5JXC2 388 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 IQCEQ6IPM2 695 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 ACOT1Q86TX2 421 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 NT5C1BQ96P26 610 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 CORO1BQ9BR76 489 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 NT5C1AQ9BXI3 368 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 NAT10Q9H0A0 1025 aaKnown RBP14.43□□□□□ -0.1
COL1A1-208ENST00000494334 NDST4Q9H3R1 872 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 CD320Q9NPF0 282 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 CISHQ9NSE2 258 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 USTQ9Y2C2 406 aa14.43□□□□□ -0.1
COL1A1-208ENST00000494334 TCF20Q9UGU0 1960 aaKnown RBP14.43□□□□□ -0.1
COL1A1-208ENST00000494334 C2CD4DB7Z1M9 353 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 BDNFP23560 247 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 FSHRP23945 695 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 DDR2Q16832 855 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 PABPC1LQ4VXU2 614 aaKnown RBP14.42□□□□□ -0.1
COL1A1-208ENST00000494334 ZNF394Q53GI3 561 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 SDHAF4Q5VUM1 108 aa14.42□□□□□ -0.1
COL1A1-208ENST00000494334 PAQR9Q6ZVX9 377 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms