RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 OR10T2Q8NGX3 314 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 DEPTORQ8TB45 409 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 CCDC43Q96MW1 224 aaKnown RBP16.57■□□□□ 0.24
U2AF1-211ENST00000486519 SLC22A12Q96S37 553 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 LINC00597Q9H2U6 94 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 PTPRHQ9HD43 1115 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 DUS2Q9NX74 493 aaKnown RBP16.57■□□□□ 0.24
U2AF1-211ENST00000486519 PCOLCE2Q9UKZ9 415 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 APOBEC2Q9Y235 224 aaKnown RBP16.57■□□□□ 0.24
U2AF1-211ENST00000486519 ABLIM1O14639 778 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 PPEF2O14830 753 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 TADA3O75528 432 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 KLF8O95600 359 aaPredicted RBP16.56■□□□□ 0.24
U2AF1-211ENST00000486519 FGF19O95750 216 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 ATXN1LP0C7T5 689 aaKnown RBP16.56■□□□□ 0.24
U2AF1-211ENST00000486519 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 HSPA4P34932 840 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 AVPR1AP37288 418 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 GUCY2FP51841 1108 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 YARSP54577 528 aaKnown RBP16.56■□□□□ 0.24
U2AF1-211ENST00000486519 NLRP12P59046 1061 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 AMPD2Q01433 879 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 ZNF77Q15935 545 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 CC2D1AQ6P1N0 951 aaPredicted RBP16.56■□□□□ 0.24
U2AF1-211ENST00000486519 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 GLRX5Q86SX6 157 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 ITIH5Q86UX2 942 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 IL17RCQ8NAC3 791 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 WHAMMQ8TF30 809 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 SPACA7Q96KW9 195 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 CCDC94Q9BW85 323 aaPredicted RBP16.56■□□□□ 0.24
U2AF1-211ENST00000486519 IL21RQ9HBE5 538 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 GJB4Q9NTQ9 266 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
U2AF1-211ENST00000486519 OR6C75A6NL08 312 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 WNT7AO00755 349 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 TLX3O43711 291 aaPredicted RBP16.55■□□□□ 0.24
U2AF1-211ENST00000486519 ADAM23O75077 832 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 SPATA31C1P0DKV0 1188 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 HMGA1P17096 107 aaKnown RBP16.55■□□□□ 0.24
U2AF1-211ENST00000486519 HOXD12P35452 270 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 TIE1P35590 1138 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 NAMPTP43490 491 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 GPR15P49685 360 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 RPL6Q02878 288 aaKnown RBP16.55■□□□□ 0.24
U2AF1-211ENST00000486519 SRSF1Q07955 248 aaKnown RBP eCLIP16.55■□□□□ 0.24
U2AF1-211ENST00000486519 MGAT5BQ3V5L5 792 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 ZNF568Q3ZCX4 644 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 CEP76Q8TAP6 659 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 OSCP1Q8WVF1 389 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 GCNAQ96QF7 691 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 CLMPQ9H6B4 373 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 CD93Q9NPY3 652 aa16.55■□□□□ 0.24
U2AF1-211ENST00000486519 TOPORSQ9NS56 1045 aaPredicted RBP16.55■□□□□ 0.24
U2AF1-211ENST00000486519 BCCIPQ9P287 314 aaKnown RBP eCLIP16.55■□□□□ 0.24
U2AF1-211ENST00000486519 GOLGA8CPA6NN73 597 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 DKK1O94907 266 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 HARSP12081 509 aaKnown RBP16.54■□□□□ 0.24
U2AF1-211ENST00000486519 AARSP49588 968 aaKnown RBP eCLIP16.54■□□□□ 0.24
U2AF1-211ENST00000486519 CFHR1Q03591 330 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 ZNF33AQ06730 810 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 USP4Q13107 963 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 ZC2HC1CQ53FD0 456 aaPredicted RBP16.54■□□□□ 0.24
U2AF1-211ENST00000486519 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 TAS1R3Q7RTX0 852 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 EFCAB13Q8IY85 973 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 SPRYD3Q8NCJ5 442 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 MCPH1Q8NEM0 835 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 ZBTB45Q96K62 511 aaPredicted RBP16.54■□□□□ 0.24
U2AF1-211ENST00000486519 FCRL3Q96P31 734 aaPredicted RBP16.54■□□□□ 0.24
U2AF1-211ENST00000486519 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 CYP2S1Q96SQ9 504 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
U2AF1-211ENST00000486519 TMEM131Q92545 1883 aa16.54■□□□□ 0.24
U2AF1-211ENST00000486519 SCN1AP35498 2009 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 COL6A6A6NMZ7 2263 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 TCRBV21S2A2A0A5A6 115 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 GCFC2P16383 781 aaKnown RBP16.53■□□□□ 0.24
U2AF1-211ENST00000486519 EIF2S3P41091 472 aaKnown RBP16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SLC6A11P48066 632 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SLC14A1Q13336 389 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SLC10A6Q3KNW5 377 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SLC39A12Q504Y0 691 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SPDYCQ5MJ68 293 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SDHAF4Q5VUM1 108 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 OVOS1Q6IE37 1185 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 BAHD1Q8TBE0 780 aaPredicted RBP16.53■□□□□ 0.24
U2AF1-211ENST00000486519 ERLEC1Q96DZ1 483 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 TARS2Q9BW92 718 aaKnown RBP16.53■□□□□ 0.24
U2AF1-211ENST00000486519 SEMA4CQ9C0C4 833 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 DNMT3LQ9UJW3 386 aa16.53■□□□□ 0.24
U2AF1-211ENST00000486519 MED24O75448 989 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 ALDH1A2O94788 518 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.24
U2AF1-211ENST00000486519 IFNAR2P48551 515 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 GRIK2Q13002 908 aa16.52■□□□□ 0.24
U2AF1-211ENST00000486519 DMP1Q13316 513 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms