RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 OR6B3Q8NGW1 331 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 PKMYT1Q99640 499 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 TSG101Q99816 390 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 LRRC3Q9BY71 257 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 GTPBP4Q9BZE4 634 aaKnown RBP25.71■■□□□ 1.71
CPNE1-223ENST00000475146 ZNF334Q9HCZ1 680 aaPredicted RBP25.71■■□□□ 1.71
CPNE1-223ENST00000475146 MYBPHLA2RUH7 354 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 ATP2C2O75185 946 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 TRIM49P0CI25 452 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 TRIM49CP0CI26 452 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 ZACNQ401N2 412 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 ZNF667Q5HYK9 610 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 POTEHQ6S545 545 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 ELOA2Q8IYF1 753 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-223ENST00000475146 GPR152Q8TDT2 470 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 ABCB6Q9NP58 842 aa25.7■■□□□ 1.7
CPNE1-223ENST00000475146 IKBKBO14920 756 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 TACC1O75410 805 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 VNN1O95497 513 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 FGF19O95750 216 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 CYP2F1P24903 491 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 GABRR2P28476 465 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 GNL1P36915 607 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-223ENST00000475146 PIK3CAP42336 1068 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 GPR15P49685 360 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 COBLL1Q53SF7 1204 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 FAM78AQ5JUQ0 283 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 ISM2Q6H9L7 571 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 SV2AQ7L0J3 742 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 SIX5Q8N196 739 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 EEF2KMTQ96G04 330 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 ATXN3LQ9H3M9 355 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 MMRN2Q9H8L6 949 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 VRTNQ9H8Y1 702 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 MAN1B1Q9UKM7 699 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 CA14Q9ULX7 337 aa25.69■■□□□ 1.7
CPNE1-223ENST00000475146 CETN3O15182 167 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 ECI2O75521 394 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 RPL10AP62906 217 aaKnown RBP25.68■■□□□ 1.7
CPNE1-223ENST00000475146 STIM1Q13586 685 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 MAPRE1Q15691 268 aaKnown RBP25.68■■□□□ 1.7
CPNE1-223ENST00000475146 C1orf220Q5T0J3 134 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 SDHAF4Q5VUM1 108 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 FAM171BQ6P995 826 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 SCARA5Q6ZMJ2 495 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 C4orf50Q6ZRC1 276 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 MYLPFQ96A32 169 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 ELMO3Q96BJ8 720 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 ZSWIM3Q96MP5 696 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 ASB16Q96NS5 453 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 GCNAQ96QF7 691 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 SMYD3Q9H7B4 428 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 ZFP14Q9HCL3 533 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 CRTAC1Q9NQ79 661 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 SLC2A4RGQ9NR83 387 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 WNT16Q9UBV4 365 aa25.68■■□□□ 1.7
CPNE1-223ENST00000475146 FAM163BP0C2L3 166 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 EPB41P11171 864 aaKnown RBP25.67■■□□□ 1.7
CPNE1-223ENST00000475146 GCLMP48507 274 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 VCPP55072 806 aaKnown RBP25.67■■□□□ 1.7
CPNE1-223ENST00000475146 UBE2HP62256 183 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 GPC5P78333 572 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 DDR2Q16832 855 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 TANGO2Q6ICL3 276 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 GAREM2Q75VX8 874 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 SCN4BQ8IWT1 228 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 ADSSL1Q8N142 457 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 STKLD1Q8NE28 680 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 FLCNQ8NFG4 579 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 ZSCAN18Q8TBC5 510 aaPredicted RBP25.67■■□□□ 1.7
CPNE1-223ENST00000475146 SMARCD2Q92925 531 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 ELSPBP1Q96BH3 223 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 FUBP3Q96I24 572 aaKnown RBP eCLIP25.67■■□□□ 1.7
CPNE1-223ENST00000475146 MKNK1Q9BUB5 465 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 GPR88Q9GZN0 384 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 NME7Q9Y5B8 376 aa25.67■■□□□ 1.7
CPNE1-223ENST00000475146 A8MXQ7 604 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 HLA-DRAP01903 254 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 P4HA1P13674 534 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 RFX1P22670 979 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 FCARP24071 287 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 CDC25CP30307 473 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 RAP1GAPP47736 663 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 CYP27A1Q02318 531 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 SGSM1Q2NKQ1 1148 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 CFAP221Q4G0U5 840 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 ARHGAP15Q53QZ3 475 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 MDH1BQ5I0G3 518 aa25.66■■□□□ 1.7
CPNE1-223ENST00000475146 MAGEC2Q9UBF1 373 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-223ENST00000475146 MAGED2Q9UNF1 606 aaPredicted RBP25.66■■□□□ 1.7
CPNE1-223ENST00000475146 PSMA7O14818 248 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 CSH1P0DML2 217 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 CSH2P0DML3 217 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 PMS1P54277 932 aaKnown RBP25.65■■□□□ 1.7
CPNE1-223ENST00000475146 ENPEPQ07075 957 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 PPP3CAQ08209 521 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 STXBP5Q5T5C0 1151 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 GPR158Q5T848 1215 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 ANKRD40Q6AI12 368 aa25.65■■□□□ 1.7
CPNE1-223ENST00000475146 PLA2G2FQ9BZM2 168 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms