RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SURF1Q15526 300 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 INTS6LQ5JSJ4 861 aaKnown RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 LMBRD2Q68DH5 695 aaPredicted RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 MAMSTRQ6ZN01 415 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 RALGPS2Q86X27 583 aaPredicted RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 ADGRF2Q8IZF7 708 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 DCLK2Q8N568 766 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 CELF5Q8N6W0 485 aaKnown RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 LEO1Q8WVC0 666 aaPredicted RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 SNX21Q969T3 373 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 SLC46A2Q9BY10 475 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 SMG9Q9H0W8 520 aaKnown RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 INTS13Q9NVM9 706 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 GTSE1Q9NYZ3 720 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 NCDNQ9UBB6 729 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 SIX4Q9UIU6 781 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 MAGED2Q9UNF1 606 aaPredicted RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 TCHHQ07283 1943 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 FANCMQ8IYD8 2048 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 MYBPHLA2RUH7 354 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 SPECC1L-ADORA2AF8WAN1 911 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 EIF3DO15371 548 aaKnown RBP eCLIP22.59■■□□□ 1.21
VSX1-206ENST00000444511 HSP90AA1P07900 732 aaKnown RBP22.59■■□□□ 1.21
VSX1-206ENST00000444511 CSH1P0DML2 217 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 CSH2P0DML3 217 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 HMGA1P17096 107 aaKnown RBP22.59■■□□□ 1.21
VSX1-206ENST00000444511 AVPR1AP37288 418 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 LHX1P48742 406 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 GPR15P49685 360 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 NRLP54845 237 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 NLRP12P59046 1061 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 RPL10AP62906 217 aaKnown RBP22.59■■□□□ 1.21
VSX1-206ENST00000444511 FOXK2Q01167 660 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 SCARA3Q6AZY7 606 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 SHC4Q6S5L8 630 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 CBWD2Q8IUF1 395 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 CMTM8Q8IZV2 173 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 TOP6BLQ8N6T0 577 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 SPATA18Q8TC71 538 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 KIAA1586Q9HCI6 787 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 ABCB6Q9NP58 842 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 HSPBP1Q9NZL4 362 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 GTF3C4Q9UKN8 822 aa22.59■■□□□ 1.21
VSX1-206ENST00000444511 EP300Q09472 2414 aaPredicted RBP22.58■■□□□ 1.21
VSX1-206ENST00000444511 LILRB5O75023 590 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 F11P03951 625 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 DDX6P26196 483 aaKnown RBP eCLIP22.58■■□□□ 1.21
VSX1-206ENST00000444511 PCSK1P29120 753 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 CTHP32929 405 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 DDR2Q16832 855 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 DUOXA2Q1HG44 320 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 FOXD4L6Q3SYB3 417 aaPredicted RBP22.58■■□□□ 1.21
VSX1-206ENST00000444511 FAM26FQ5R3K3 315 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 SDHAF4Q5VUM1 108 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 FOXD4L3Q6VB84 417 aaPredicted RBP22.58■■□□□ 1.21
VSX1-206ENST00000444511 TMEM150AQ86TG1 271 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 HSCBQ8IWL3 235 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 MAB21L3Q8N8X9 362 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 STKLD1Q8NE28 680 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 OR5B17Q8NGF7 314 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 MRPS31Q92665 395 aaKnown RBP22.58■■□□□ 1.21
VSX1-206ENST00000444511 HPDLQ96IR7 371 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 EPC1Q9H2F5 836 aa22.58■■□□□ 1.21
VSX1-206ENST00000444511 SMG5Q9UPR3 1016 aaKnown RBP22.58■■□□□ 1.21
VSX1-206ENST00000444511 F5P12259 2224 aa22.58■■□□□ 1.2
VSX1-206ENST00000444511 PTPRJQ12913 1337 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 PDIA4P13667 645 aaKnown RBP22.57■■□□□ 1.2
VSX1-206ENST00000444511 CYP2F1P24903 491 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 HOXD13P35453 343 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 CXCL12P48061 93 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 TNK2Q07912 1038 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 SOWAHAQ2M3V2 549 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 CNNM4Q6P4Q7 775 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 TXNDC11Q6PKC3 985 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 OSTM1Q86WC4 334 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 SPATA2LQ8IUW3 424 aaPredicted RBP22.57■■□□□ 1.2
VSX1-206ENST00000444511 SECISBP2LQ93073 1101 aaKnown RBP22.57■■□□□ 1.2
VSX1-206ENST00000444511 MAGEF1Q9HAY2 307 aa22.57■■□□□ 1.2
VSX1-206ENST00000444511 RBM12Q9NTZ6 932 aaKnown RBP22.57■■□□□ 1.2
VSX1-206ENST00000444511 UXTQ9UBK9 157 aaPredicted RBP22.57■■□□□ 1.2
VSX1-206ENST00000444511 NUP210Q8TEM1 1887 aaPredicted RBP22.56■■□□□ 1.2
VSX1-206ENST00000444511 GABRDO14764 452 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 ZSCAN22P10073 491 aaPredicted RBP22.56■■□□□ 1.2
VSX1-206ENST00000444511 ITPRIPL2Q3MIP1 535 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 DGKKQ5KSL6 1271 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 TXNDC8Q6A555 127 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 EPM2AIP1Q7L775 607 aaPredicted RBP22.56■■□□□ 1.2
VSX1-206ENST00000444511 DPH6Q7L8W6 267 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 ERMP1Q7Z2K6 904 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 WDR49Q8IV35 697 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 SPEM1Q8N4L4 309 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 ZNF507Q8TCN5 953 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 PKMYT1Q99640 499 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 C7orf25Q9BPX7 421 aa22.56■■□□□ 1.2
VSX1-206ENST00000444511 SPTBN4Q9H254 2564 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 POLR2DO15514 142 aaKnown RBP22.55■■□□□ 1.2
VSX1-206ENST00000444511 HCRTO43612 131 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 TDGF1P13385 188 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 SATB1Q01826 763 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 GAS6Q14393 721 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms