RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 KIF11P52732 1056 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 GRIK3Q13003 919 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 SPOPLQ6IQ16 392 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 ANKRD54Q6NXT1 300 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 DGLUCYQ7Z3D6 616 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 KIAA2013Q8IYS2 634 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 CCAR2Q8N163 923 aaKnown RBP12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 TXLNBQ8N3L3 684 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 GSTCDQ8NEC7 633 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 FLCNQ8NFG4 579 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 KAT5Q92993 513 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 HPDLQ96IR7 371 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 SYT11Q9BT88 431 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 BCO2Q9BYV7 579 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 SPTLC3Q9NUV7 552 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 TMEM161AQ9NX61 479 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 AGAP1Q9UPQ3 857 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 SORCS3Q9UPU3 1222 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
AC009404.1-202ENST00000439955 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 AKR1B10O60218 316 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 OFD1O75665 1012 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 PLEKP08567 350 aaPredicted RBP12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 ACO1P21399 889 aaKnown RBP12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 CLCN1P35523 988 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 MLH1P40692 756 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 ARID5AQ03989 594 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 MTF1Q14872 753 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 SPA17Q15506 151 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 NAB2Q15742 525 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 SLC18A3Q16572 532 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 GLRA4Q5JXX5 417 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 PLPP4Q5VZY2 271 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 ZNF662Q6ZS27 426 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 UBALD2Q8IYN6 164 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 GAD1Q99259 594 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 CNTNAP3Q9BZ76 1288 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 PPP2R2CQ9Y2T4 447 aa12.51□□□□□ -0.41
AC009404.1-202ENST00000439955 MEIS3P2A8K0S8 358 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 HOXA2O43364 376 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 PI15O43692 258 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 FGF18O76093 207 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 CLSTN1O94985 981 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 WEE2P0C1S8 567 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 FAM163BP0C2L3 166 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 PNMA6AP0CW24 399 aaPredicted RBP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 PDE6CP51160 858 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 ZNF132P52740 706 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 TNNC1P63316 161 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 PTK2Q05397 1052 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 SOX4Q06945 474 aaPredicted RBP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 WDR72Q3MJ13 1102 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 SV2CQ496J9 727 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 C10orf76Q5T2E6 689 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 GLB1LQ6UWU2 654 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 ZNF571Q7Z3V5 609 aaPredicted RBP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 EPS8L1Q8TE68 723 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 LPPQ93052 612 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 UROC1Q96N76 676 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 ARID3AQ99856 593 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 GDAP2Q9NXN4 497 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 KANSL3Q9P2N6 904 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 LRFN2Q9ULH4 789 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 PCDHB12Q9Y5F1 795 aa12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 RIF1Q5UIP0 2472 aaKnown RBP12.5□□□□□ -0.41
AC009404.1-202ENST00000439955 KIAA1671Q9BY89 1806 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 HIDE1A8MVS5 230 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 CYP26A1O43174 497 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 SRGAP2BP0DMP2 458 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 KRT5P13647 590 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 CYP11B1P15538 503 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 USP8P40818 1118 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 TAF6P49848 677 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 SCNN1GP51170 649 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 INCA1Q0VD86 236 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 TUSC3Q13454 348 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 KCNC3Q14003 757 aa12.49□□□□□ -0.41
AC009404.1-202ENST00000439955 CWF19L1Q69YN2 538 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms