RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 KRT1P04264 644 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 KRT3P12035 628 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ATF2P15336 505 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 GRM5P41594 1212 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 GABRB2P47870 512 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ITGA8P53708 1063 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 LMNB2Q03252 620 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 MKRN3Q13064 507 aaKnown RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 IRF5Q13568 498 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ZNF268Q14587 947 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 CNGA2Q16280 664 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 GPR162Q16538 588 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 TFDP3Q5H9I0 405 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 SPOCD1Q6ZMY3 1216 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 PLEKHH3Q7Z736 793 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 XYLT1Q86Y38 959 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ARFGAP1Q8N6T3 406 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 OR6J1Q8NGC5 347 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 NPLOC4Q8TAT6 608 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 CCDC114Q96M63 670 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ADAMTS10Q9H324 1103 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 CDC42EP4Q9H3Q1 356 aaKnown RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 BCCIPQ9P287 314 aaKnown RBP eCLIP9.55□□□□□ -0.88
TDP1-202ENST00000393452 TJP2Q9UDY2 1190 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 RSPH14Q9UHP6 348 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 EFR3BQ9Y2G0 817 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 SLC15A5A6NIM6 579 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 C3orf70A6NLC5 250 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 PI4K2BG5E9Z4 385 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 VDRP11473 427 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 KRT10P13645 584 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 HOXA11P31270 313 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 CHKAP35790 457 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 CDKN2BP42772 138 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 GPD2P43304 727 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 RBP5P82980 135 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 SLC25A11Q02978 314 aaKnown RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 TRIP13Q15645 432 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 C6orf118Q5T5N4 469 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 MFSD5Q6N075 450 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 SRLQ86TD4 932 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 RELL1Q8IUW5 271 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 TTC39CQ8N584 583 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 BBOF1Q8ND07 529 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 RAPGEF5Q92565 580 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 SCLT1Q96NL6 688 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 ROPN1BQ9BZX4 212 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 ROPN1Q9HAT0 212 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 KLHL11Q9NVR0 708 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 DPP3Q9NY33 737 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 BARX2Q9UMQ3 279 aaPredicted RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 AGAP1Q9UPQ3 857 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 DRG1Q9Y295 367 aaKnown RBP9.55□□□□□ -0.88
TDP1-202ENST00000393452 A6NJR5 290 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 LRCH4O75427 683 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 MICAL2O94851 1124 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 TTC4O95801 387 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 ERBB2P04626 1255 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 ADCY8P40145 1251 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 CCT5P48643 541 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 PSMC1P62191 440 aaKnown RBP9.54□□□□□ -0.88
TDP1-202ENST00000393452 CDC42EP1Q00587 391 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 TAZQ16635 292 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 DCAF4L1Q3SXM0 396 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 ZNF365Q70YC5 407 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 JOSD2Q8TAC2 188 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 NKD2Q969F2 451 aaPredicted RBP9.54□□□□□ -0.88
TDP1-202ENST00000393452 MCRS1Q96EZ8 462 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 FAM118BQ9BPY3 351 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 CNOT10Q9H9A5 744 aaKnown RBP9.54□□□□□ -0.88
TDP1-202ENST00000393452 PLEKHA5Q9HAU0 1116 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 SETD4Q9NVD3 440 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 DNPEPQ9ULA0 475 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 DERAQ9Y315 318 aa9.54□□□□□ -0.88
TDP1-202ENST00000393452 PDCD11Q14690 1871 aaKnown RBP9.54□□□□□ -0.88
TDP1-202ENST00000393452 MBLAC1A4D2B0 266 aaPredicted RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 GOLGA8SH3BPF8 625 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 TULP2O00295 520 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 NDUFAB1O14561 156 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 GPR32O75388 356 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 AGTP01019 485 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 KRT7P08729 469 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 ATF7P17544 494 aaPredicted RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 PSMA2P25787 234 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 MMP13P45452 471 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 ORC1Q13415 861 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 ACAP1Q15027 740 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 PCBP1Q15365 356 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-202ENST00000393452 OASLQ15646 514 aaKnown RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 HIBCHQ6NVY1 386 aaPredicted RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 CCDC25Q86WR0 208 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 MYCBPAPQ8TBZ2 947 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 CCHCR1Q8TD31 782 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 FOXP3Q9BZS1 431 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 ANAPC5Q9UJX4 755 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 KIAA1257Q9ULG3 409 aa9.53□□□□□ -0.88
TDP1-202ENST00000393452 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
TDP1-202ENST00000393452 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms