RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ATG2BQ96BY7 2078 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 TRDMT1O14717 391 aaKnown RBP14.86□□□□□ -0.03
CXCL12-202ENST00000374426 FOXD2O60548 495 aaPredicted RBP14.86□□□□□ -0.03
CXCL12-202ENST00000374426 KCNA1Q09470 495 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 GRSF1Q12849 480 aaKnown RBP eCLIP14.86□□□□□ -0.03
CXCL12-202ENST00000374426 BFSP1Q12934 665 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 PTPAQ15257 358 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 SF3A1Q15459 793 aaKnown RBP14.86□□□□□ -0.03
CXCL12-202ENST00000374426 SV2CQ496J9 727 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 LARP1BQ659C4 914 aaKnown RBP14.86□□□□□ -0.03
CXCL12-202ENST00000374426 TXNDC8Q6A555 127 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 USP49Q70CQ1 688 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 KRI1Q8N9T8 703 aaKnown RBP14.86□□□□□ -0.03
CXCL12-202ENST00000374426 GAB3Q8WWW8 586 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 EPSTI1Q96J88 318 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 PI4K2AQ9BTU6 479 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 STRA6Q9BX79 667 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 TDP1Q9NUW8 608 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 SMC3Q9UQE7 1217 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 DENND4CQ5VZ89 1909 aa14.86□□□□□ -0.03
CXCL12-202ENST00000374426 FRYQ5TBA9 3013 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 CCDC163A0A0D9SF12 145 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 AXIN1O15169 862 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 TADA3O75528 432 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 RPP40O75818 363 aaKnown RBP14.85□□□□□ -0.03
CXCL12-202ENST00000374426 IL18RAPO95256 599 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 ARSAP15289 507 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 DDX6P26196 483 aaKnown RBP eCLIP14.85□□□□□ -0.03
CXCL12-202ENST00000374426 TSPY1Q01534 308 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 POSTNQ15063 836 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 SDHAF4Q5VUM1 108 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 SCARA3Q6AZY7 606 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 DYMQ7RTS9 669 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 BRAPQ7Z569 592 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 MON1AQ86VX9 555 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 NT5DC4Q86YG4 428 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 PDCL2Q8N4E4 241 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 ZSWIM2Q8NEG5 633 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 HVCN1Q96D96 273 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 ZNF560Q96MR9 790 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 KIF9Q9HAQ2 790 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 FBRSL1Q9HCM7 1045 aaKnown RBP14.85□□□□□ -0.03
CXCL12-202ENST00000374426 POLR3BQ9NW08 1133 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-202ENST00000374426 MAGED2Q9UNF1 606 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-202ENST00000374426 TCHHQ07283 1943 aa14.85□□□□□ -0.03
CXCL12-202ENST00000374426 SOBPA7XYQ1 873 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 PRPF40AO75400 957 aaKnown RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 EGFP01133 1207 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 ITGB3P05106 788 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 CSH1P0DML2 217 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 CSH2P0DML3 217 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 POLR2BP30876 1174 aaKnown RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 PNPLA4P41247 253 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 RAP1GAPP47736 663 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 SF3A2Q15428 464 aaKnown RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 CCDC6Q16204 474 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 NFE2Q16621 373 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 DDR2Q16832 855 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 NAIF1Q69YI7 327 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 CACNA2D4Q7Z3S7 1137 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 KBTBD6Q86V97 674 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 C1orf127Q8N9H9 656 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 CXorf38Q8TB03 319 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 LEO1Q8WVC0 666 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 MRPS31Q92665 395 aaKnown RBP14.84□□□□□ -0.03
CXCL12-202ENST00000374426 SAAL1Q96ER3 474 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 LOXL4Q96JB6 756 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 FAM84AQ96KN4 292 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 PKMYT1Q99640 499 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 FAM213AQ9BRX8 229 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 ARRDC1-AS1Q9H2J1 176 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 RXFP3Q9NSD7 469 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 L1RE1Q9UN81 338 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 AGAP1Q9UPQ3 857 aa14.84□□□□□ -0.03
CXCL12-202ENST00000374426 OBSL1O75147 1896 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 MYMKA6NI61 221 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ATG13O75143 517 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 RNF40O75150 1001 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 NOL4O94818 638 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 EPN2O95208 641 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ZNF806P0C7X5 589 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ACAT1P24752 427 aaKnown RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 CYP2F1P24903 491 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 GALK1P51570 392 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ZNF268Q14587 947 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 CCDC142Q17RM4 750 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 AASDHQ4L235 1098 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 CC2D1AQ6P1N0 951 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 BRSK2Q8IWQ3 736 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 DNAJC19Q96DA6 116 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 TRMT2BQ96GJ1 504 aaKnown RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ACBD6Q9BR61 282 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 MRPL44Q9H9J2 332 aaKnown RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 ABCB6Q9NP58 842 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
CXCL12-202ENST00000374426 TBC1D7Q9P0N9 293 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 SEL1LQ9UBV2 794 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 STK17AQ9UEE5 414 aa14.83□□□□□ -0.04
CXCL12-202ENST00000374426 SLC8A2Q9UPR5 921 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms