RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FAM237BA0A1B0GVD1 139 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 E5RJQ4 531 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 POC1B-GALNT4F8VUJ3 575 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 H3BNX3 289 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 K7EPI3 171 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 FOXD2O60548 495 aaPredicted RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 ABHD2P08910 425 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 LMNB1P20700 586 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 CDK9P50750 372 aaKnown RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 NR1H2P55055 460 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 RAB15P59190 212 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 ARHGAP4P98171 946 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 ZYXQ15942 572 aaKnown RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 OGFRL1Q5TC84 451 aaPredicted RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 IYDQ6PHW0 289 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 LDHAL6AQ6ZMR3 332 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 POU5F2Q8N7G0 328 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 ATG4AQ8WYN0 398 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 TSSK1BQ9BXA7 367 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 ALG13Q9NP73 1137 aaKnown RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 TRNAU1APQ9NX07 287 aaKnown RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 A0A1W2PQ67 120 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 TNFAIP8O95379 198 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 HOXD13P35453 343 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 PRKD1Q15139 912 aaPredicted RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 GPR162Q16538 588 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 NANOGP8Q6NSW7 305 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 GPATCH1Q9BRR8 931 aaKnown RBP10.02□□□□□ -0.81
SF3A3-201ENST00000373019 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 INPP5FQ9Y2H2 1132 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 MAD1L1Q9Y6D9 718 aa10.02□□□□□ -0.81
SF3A3-201ENST00000373019 CLDN3O15551 220 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 PDE8BO95263 885 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 OCM2P0CE71 109 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 OCMP0CE72 109 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 STIP1P31948 543 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 MAGEA4P43358 317 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 KPNA1P52294 538 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 NOP9Q86U38 636 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 NLRP10Q86W26 655 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 SLC26A7Q8TE54 656 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 CCDC127Q96BQ5 260 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 NSMCE3Q96MG7 304 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 C1orf21Q9H246 121 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 SENP1Q9P0U3 644 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 C10orf71Q711Q0 1435 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 GOLGA8TH3BQL2 631 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 EEF2P13639 858 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 NR2F2P24468 414 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 SOX5P35711 763 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 STAT1P42224 750 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 EFHC1Q5JVL4 640 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 SYNE4Q8N205 404 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 CENPSQ8N2Z9 138 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 TCP10LQ8TDR4 215 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 FAM89AQ96GI7 184 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 MTMR9Q96QG7 549 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 HERPUD2Q9BSE4 406 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 TYW1Q9NV66 732 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 NIP7Q9Y221 180 aaKnown RBP eCLIP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 POTEMA6NI47 508 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 FSCN2O14926 492 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 CRTAMO95727 393 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 PABPC1P11940 636 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 HOXA7P31268 230 aaPredicted RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 RCVRNP35243 200 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 EIF2B2P49770 351 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 CCT8P50990 548 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 CAV1Q03135 178 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 FAM209AQ5JX71 171 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 SPOPLQ6IQ16 392 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 FASTKD5Q7L8L6 764 aaKnown RBP10.01□□□□□ -0.81
SF3A3-201ENST00000373019 ANKS1BQ7Z6G8 1248 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 FRMD5Q7Z6J6 570 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 AMIGO2Q86SJ2 522 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 USP33Q8TEY7 942 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 TRIM11Q96F44 468 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 VPS11Q9H270 941 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 MAN1C1Q9NR34 630 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 GCNT4Q9P109 453 aa10.01□□□□□ -0.81
SF3A3-201ENST00000373019 CYTH3O43739 400 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 UQCRFS1P1P0C7P4 283 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 RPS3AP61247 264 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 FASTKD3Q14CZ7 662 aaKnown RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 CYTH1Q15438 398 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 DNAL1Q4LDG9 190 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 PCNX4Q63HM2 1172 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 OGFOD2Q6N063 350 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 ANO5Q75V66 913 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 VASH1Q7L8A9 365 aaPredicted RBP10□□□□□ -0.81
SF3A3-201ENST00000373019 RHOT2Q8IXI1 618 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 CPNE9Q8IYJ1 553 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 RNF169Q8NCN4 708 aa10□□□□□ -0.81
SF3A3-201ENST00000373019 DDI1Q8WTU0 396 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms