RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ART4Q93070 314 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 TRIM6Q9C030 488 aaPredicted RBP18.89■□□□□ 0.62
CTSA-204ENST00000372484 AP5M1Q9H0R1 490 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 ASIC3Q9UHC3 531 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 HES2Q9Y543 173 aa18.89■□□□□ 0.62
CTSA-204ENST00000372484 HMGB1P1B2RPK0 211 aaPredicted RBP18.89■□□□□ 0.61
CTSA-204ENST00000372484 HMGCRP04035 888 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 RGS2P41220 211 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 BEX3Q00994 111 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 CNGA2Q16280 664 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 CCNG2Q16589 344 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 SYDE1Q6ZW31 735 aaPredicted RBP18.89■□□□□ 0.61
CTSA-204ENST00000372484 TTC39CQ8N584 583 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 SNX27Q96L92 541 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 ZMAT2Q96NC0 199 aaKnown RBP18.89■□□□□ 0.61
CTSA-204ENST00000372484 SLITRK1Q96PX8 696 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 WDR35Q9P2L0 1181 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 DERAQ9Y315 318 aa18.89■□□□□ 0.61
CTSA-204ENST00000372484 ERBB2P04626 1255 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 ATF7P17544 494 aaPredicted RBP18.88■□□□□ 0.61
CTSA-204ENST00000372484 PSMA2P25787 234 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 KAZNQ674X7 775 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 XYLT1Q86Y38 959 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 FAM118BQ9BPY3 351 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 FAM129AQ9BZQ8 928 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 ZMYND15Q9H091 742 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 PABPC3Q9H361 631 aaKnown RBP18.88■□□□□ 0.61
CTSA-204ENST00000372484 FAM124BQ9H5Z6 455 aaPredicted RBP18.88■□□□□ 0.61
CTSA-204ENST00000372484 HAS3O00219 553 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 TREHO43280 583 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 ADAM17P78536 824 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 IFFO1Q0D2I5 559 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 TXNRD3NBQ6F5E7 133 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 IFNL1Q8IU54 200 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 JOSD2Q8TAC2 188 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 NT5C1AQ9BXI3 368 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 CAPS2Q9BXY5 557 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 NXF3Q9H4D5 531 aaKnown RBP18.88■□□□□ 0.61
CTSA-204ENST00000372484 WHRNQ9P202 907 aa18.88■□□□□ 0.61
CTSA-204ENST00000372484 SHOX2O60902 331 aaPredicted RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 KRT10P13645 584 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 GPD2P43304 727 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 CENPFP49454 3210 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 ZNF200P98182 395 aaPredicted RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 PDCLQ13371 301 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 PTK6Q13882 451 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 ZNF268Q14587 947 aaPredicted RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 TRIP13Q15645 432 aaPredicted RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 MFSD7Q6UXD7 560 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 UBA3Q8TBC4 463 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 APBA2Q99767 749 aa18.87■□□□□ 0.61
CTSA-204ENST00000372484 METTL5Q9NRN9 209 aaKnown RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 DDX56Q9NY93 547 aaKnown RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 PIN4Q9Y237 131 aaKnown RBP18.87■□□□□ 0.61
CTSA-204ENST00000372484 TJP3O95049 919 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 NR1D1P20393 614 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 EIF3BP55884 814 aaKnown RBP18.86■□□□□ 0.61
CTSA-204ENST00000372484 GSCP56915 257 aaPredicted RBP18.86■□□□□ 0.61
CTSA-204ENST00000372484 COPS2P61201 443 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SLMAPQ14BN4 828 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 ZSCAN26Q16670 478 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 CHADLQ6NUI6 762 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 RGMBQ6NW40 437 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 BEST2Q8NFU1 509 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 FNIP1Q8TF40 1166 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 TMEM40Q8WWA1 233 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 ACSF2Q96CM8 615 aaPredicted RBP18.86■□□□□ 0.61
CTSA-204ENST00000372484 SNF8Q96H20 258 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 APOL6Q9BWW8 343 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 TUBGCP4Q9UGJ1 667 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 KIAA1257Q9ULG3 409 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SNX9Q9Y5X1 595 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 LRRD1A4D1F6 860 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 TNPO2O14787 897 aaKnown RBP18.86■□□□□ 0.61
CTSA-204ENST00000372484 RECQL4O94761 1208 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 ITIH2P19823 946 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 AXLP30530 894 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 ATP1A2P50993 1020 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SKOR1P84550 965 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 ADCY2Q08462 1091 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SNX17Q15036 470 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 ZBTB6Q15916 424 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 KRT71Q3SY84 523 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 DENND2CQ68D51 928 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SPOCD1Q6ZMY3 1216 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SAPCD2Q86UD0 394 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 EMC1Q8N766 993 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 RAPGEF5Q92565 580 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 C18orf25Q96B23 403 aaPredicted RBP18.86■□□□□ 0.61
CTSA-204ENST00000372484 KATNAL1Q9BW62 490 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 EPB41L4BQ9H329 900 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 GJD2Q9UKL4 321 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 Q9Y3F1 56 aa18.86■□□□□ 0.61
CTSA-204ENST00000372484 PPEF2O14830 753 aa18.85■□□□□ 0.61
CTSA-204ENST00000372484 AKAP5P24588 427 aa18.85■□□□□ 0.61
CTSA-204ENST00000372484 GABRB2P47870 512 aa18.85■□□□□ 0.61
CTSA-204ENST00000372484 FSCN1Q16658 493 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms