RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 PLCL1Q15111 1095 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 HIF1AQ16665 826 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 CAPN11Q9UMQ6 739 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 KIF1AQ12756 1690 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 GALCP54803 685 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 ANKRD20A4Q4UJ75 823 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 ANKRD20A8PQ5CZ79 823 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 ANKRD20A2Q5SQ80 823 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 ANKRD20A1Q5TYW2 823 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 SLC27A1Q6PCB7 646 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 XPO6Q96QU8 1125 aaKnown RBP20.11■□□□□ 0.81
LSM11-201ENST00000286307 C20orf96Q9NUD7 363 aaPredicted RBP20.11■□□□□ 0.81
LSM11-201ENST00000286307 RNF19AQ9NV58 838 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 MZF1P28698 734 aaPredicted RBP20.11■□□□□ 0.81
LSM11-201ENST00000286307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.11■□□□□ 0.81
LSM11-201ENST00000286307 PPP1R36Q96LQ0 422 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.11■□□□□ 0.81
LSM11-201ENST00000286307 UVRAGQ9P2Y5 699 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 MIPOL1Q8TD10 442 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 BLOC1S5Q8TDH9 187 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 A0A1W2PQC6 194 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 CBX4O00257 560 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 TRIM68Q6AZZ1 485 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 ARHGEF26Q96DR7 871 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 OSGEPL1Q9H4B0 414 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
LSM11-201ENST00000286307 SUPT3HB4E1H0 165 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 SUPT3HO75486 399 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 PSMC6P62333 389 aa20.11■□□□□ 0.81
LSM11-201ENST00000286307 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
LSM11-201ENST00000286307 AGRPO00253 132 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 PMS2P54278 862 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 SLC39A12Q504Y0 691 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 CCDC33Q8N5R6 958 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 RNPC3Q96LT9 517 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 CBWD1Q9BRT8 395 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 TRAIPQ9BWF2 469 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 MRPL46Q9H2W6 279 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 XPO7Q9UIA9 1087 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 VDRP11473 427 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 GRK4P32298 578 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 BCAT1P54687 386 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 CGRRF1Q99675 332 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 DIAPH2O60879 1101 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 MOXD1Q6UVY6 613 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 SPATA18Q8TC71 538 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 TRIM15Q9C019 465 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 SFMBT1Q9UHJ3 866 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 APOBEC2Q9Y235 224 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 HNRNPCL2B2RXH8 293 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 STX7O15400 261 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 HNRNPCL1O60812 293 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 VCLP18206 1134 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 NCAPHQ15003 741 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 PREPLQ4J6C6 727 aaPredicted RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 PHACTR4Q8IZ21 702 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 CCDC124Q96CT7 223 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 SYT15Q9BQS2 421 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 SLC39A10Q9ULF5 831 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 FNDC3BQ53EP0 1204 aaKnown RBP20.1■□□□□ 0.81
LSM11-201ENST00000286307 SELENONQ9NZV5 590 aa20.1■□□□□ 0.81
LSM11-201ENST00000286307 E2F8A0AVK6 867 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 NPM3O75607 178 aaKnown RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 FAM133BQ5BKY9 247 aaKnown RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 CYP2W1Q8TAV3 490 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 FEZF2Q8TBJ5 459 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 FBXO10Q9UK96 956 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 TMEM150BA6NC51 233 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 SMIM10L2AP0DMW4 78 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 SMIM10L2BP0DMW5 78 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 RGS4P49798 205 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 GTF2A1P52655 376 aaPredicted RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 TREML2Q5T2D2 321 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 PPP1R2P1Q96PQ5 205 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 ZCWPW1Q9H0M4 648 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 IL17RBQ9NRM6 502 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 PPARGC1AQ9UBK2 798 aaKnown RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 SPAG7O75391 227 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 E2F6O75461 281 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 HOXC6P09630 235 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 RHOAP61586 193 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 FMR1Q06787 632 aaKnown RBP eCLIP20.09■□□□□ 0.81
LSM11-201ENST00000286307 RFWD2Q8NHY2 731 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 HDAC6Q9UBN7 1215 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 KIAA1210Q9ULL0 1709 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 TRAPPC11Q7Z392 1133 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 PDCD7Q8N8D1 485 aaKnown RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 EML4Q9HC35 981 aaKnown RBP20.09■□□□□ 0.81
LSM11-201ENST00000286307 KLK7P49862 253 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 TKTL1P51854 596 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 SGCGQ13326 291 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 SERPINI1Q99574 410 aa20.09■□□□□ 0.81
LSM11-201ENST00000286307 USP10Q14694 798 aaKnown RBP20.08■□□□□ 0.81
LSM11-201ENST00000286307 MKNK1Q9BUB5 465 aa20.08■□□□□ 0.81
LSM11-201ENST00000286307 TRIM55Q9BYV6 548 aa20.08■□□□□ 0.81
LSM11-201ENST00000286307 CNOT10Q9H9A5 744 aaKnown RBP20.08■□□□□ 0.81
LSM11-201ENST00000286307 RRAGDQ9NQL2 400 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms