RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 YGR050CP53231 118 aa1.81□□□□□ -2.12
snR43snR43 YIP3P53633 176 aa1.81□□□□□ -2.12
snR43snR43 FRQ1Q06389 190 aa1.81□□□□□ -2.12
snR43snR43 YPL162CQ12042 273 aa1.81□□□□□ -2.12
snR43snR43 YPR063CQ12160 140 aa1.81□□□□□ -2.12
snR43snR43 ATG5Q12380 294 aa1.81□□□□□ -2.12
snR43snR43 YOR011W-AQ3E807 68 aa1.81□□□□□ -2.12
snR43snR43 YBR126W-AQ8TGU7 68 aa1.81□□□□□ -2.12
snR43snR43 RPS11AP0CX47 156 aaKnown RBP1.8□□□□□ -2.12
snR43snR43 RPS11BP0CX48 156 aaKnown RBP1.8□□□□□ -2.12
snR43snR43 CMC1P36064 111 aa1.8□□□□□ -2.12
snR43snR43 GPX2P38143 162 aa1.8□□□□□ -2.12
snR43snR43 AVT5P38176 459 aa1.8□□□□□ -2.12
snR43snR43 POP8P38208 133 aa1.8□□□□□ -2.12
snR43snR43 MBA1P38300 278 aa1.8□□□□□ -2.12
snR43snR43 RTC3P38804 111 aaPredicted RBP1.8□□□□□ -2.12
snR43snR43 BFR1P38934 470 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
snR43snR43 MIG3P39943 394 aa1.8□□□□□ -2.12
snR43snR43 NSA2P40078 261 aaKnown RBP1.8□□□□□ -2.12
snR43snR43 YER135CP40082 130 aa1.8□□□□□ -2.12
snR43snR43 YNL200CP40165 246 aaKnown RBP1.8□□□□□ -2.12
snR43snR43 IMP2P46972 177 aa1.8□□□□□ -2.12
snR43snR43 GIM3P53900 129 aa1.8□□□□□ -2.12
snR43snR43 DYN2Q02647 92 aa1.8□□□□□ -2.12
snR43snR43 SPO19Q03029 223 aa1.8□□□□□ -2.12
snR43snR43 LOA1Q06508 300 aa1.8□□□□□ -2.12
snR43snR43 YPR195CQ06594 109 aa1.8□□□□□ -2.12
snR43snR43 YOR283WQ12040 230 aaKnown RBP1.8□□□□□ -2.12
snR43snR43 MSH5Q12175 901 aa1.8□□□□□ -2.12
snR43snR43 PRM7Q12459 698 aa1.8□□□□□ -2.12
snR43snR43 SUS1Q6WNK7 96 aa1.8□□□□□ -2.12
snR43snR43 ZRC1P20107 442 aa1.79□□□□□ -2.12
snR43snR43 RPL24BP24000 155 aaKnown RBP1.79□□□□□ -2.12
snR43snR43 YCR001WP25347 104 aa1.79□□□□□ -2.12
snR43snR43 YCR025CP25352 136 aa1.79□□□□□ -2.12
snR43snR43 MRP17P28778 131 aa1.79□□□□□ -2.12
snR43snR43 RNP1P32385 249 aa1.79□□□□□ -2.12
snR43snR43 ERV15P38312 142 aa1.79□□□□□ -2.12
snR43snR43 WSS1P38838 269 aa1.79□□□□□ -2.12
snR43snR43 VHS2P40463 436 aa1.79□□□□□ -2.12
snR43snR43 HXT14P42833 540 aa1.79□□□□□ -2.12
snR43snR43 LCB3P47013 409 aa1.79□□□□□ -2.12
snR43snR43 YJR015WP47090 510 aa1.79□□□□□ -2.12
snR43snR43 AIM24P47127 394 aa1.79□□□□□ -2.12
snR43snR43 YGR025WP53216 100 aa1.79□□□□□ -2.12
snR43snR43 HCH1P53834 153 aa1.79□□□□□ -2.12
snR43snR43 FMP41P53889 259 aaKnown RBP1.79□□□□□ -2.12
snR43snR43 DCS1Q06151 350 aa1.79□□□□□ -2.12
snR43snR43 PAA1Q12447 191 aaKnown RBP1.79□□□□□ -2.12
snR43snR43 PIS1P06197 220 aaKnown RBP1.78□□□□□ -2.12
snR43snR43 CDC7P06243 507 aa1.78□□□□□ -2.12
snR43snR43 URA5P13298 226 aaKnown RBP1.78□□□□□ -2.12
snR43snR43 PAN3P36102 679 aaPredicted RBP1.78□□□□□ -2.12
snR43snR43 COS8P38723 381 aa1.78□□□□□ -2.12
snR43snR43 YHR122WP38829 231 aa1.78□□□□□ -2.12
snR43snR43 UIP3P39547 235 aa1.78□□□□□ -2.12
snR43snR43 ATG27P46989 271 aa1.78□□□□□ -2.12
snR43snR43 RBL2P48606 106 aaKnown RBP1.78□□□□□ -2.12
snR43snR43 NIF3P53081 288 aa1.78□□□□□ -2.12
snR43snR43 LST7P53237 242 aa1.78□□□□□ -2.12
snR43snR43 HST4P53688 370 aa1.78□□□□□ -2.12
snR43snR43 SNO1Q03144 224 aa1.78□□□□□ -2.12
snR43snR43 SDH7Q04401 133 aa1.78□□□□□ -2.12
snR43snR43 LCL2Q08045 131 aa1.78□□□□□ -2.12
snR43snR43 YOL160WQ08321 113 aa1.78□□□□□ -2.12
snR43snR43 CCW12Q12127 133 aa1.78□□□□□ -2.12
snR43snR43 YCT1Q12235 531 aa1.78□□□□□ -2.12
snR43snR43 YPL229WQ99395 206 aa1.78□□□□□ -2.12
snR43snR43 ANB1P19211 157 aa1.77□□□□□ -2.13
snR43snR43 YCR016WP25617 290 aaKnown RBP1.77□□□□□ -2.13
snR43snR43 YKL162CP36052 402 aa1.77□□□□□ -2.13
snR43snR43 MRPL4P36517 319 aa1.77□□□□□ -2.13
snR43snR43 RPL32P38061 130 aaKnown RBP1.77□□□□□ -2.13
snR43snR43 IRC22P40006 225 aa1.77□□□□□ -2.13
snR43snR43 GVP36P40531 326 aaKnown RBP1.77□□□□□ -2.13
snR43snR43 YIR035CP40579 254 aa1.77□□□□□ -2.13
snR43snR43 AIM25P47140 327 aa1.77□□□□□ -2.13
snR43snR43 MCM22P47167 239 aa1.77□□□□□ -2.13
snR43snR43 UBC7Q02159 165 aa1.77□□□□□ -2.13
snR43snR43 VPS28Q02767 242 aa1.77□□□□□ -2.13
snR43snR43 PEX27Q08580 376 aa1.77□□□□□ -2.13
snR43snR43 YPL264CQ08980 353 aa1.77□□□□□ -2.13
snR43snR43 AYT1Q12226 474 aa1.77□□□□□ -2.13
snR43snR43 POC4Q12245 148 aaPredicted RBP1.77□□□□□ -2.13
snR43snR43 SCM3Q12334 223 aa1.77□□□□□ -2.13
snR43snR43 PRM4Q12498 284 aa1.77□□□□□ -2.13
snR43snR43 YMR230W-AQ3E7B5 62 aa1.77□□□□□ -2.13
snR43snR43 YCR075W-AQ3E830 75 aa1.77□□□□□ -2.13
snR43snR43 ARG80P07249 177 aa1.76□□□□□ -2.13
snR43snR43 KRE9P39005 276 aa1.76□□□□□ -2.13
snR43snR43 HPA3P39979 161 aa1.76□□□□□ -2.13
snR43snR43 JLP2P40206 208 aa1.76□□□□□ -2.13
snR43snR43 PRE5P40302 234 aaKnown RBP1.76□□□□□ -2.13
snR43snR43 YIF1P53845 314 aaKnown RBP1.76□□□□□ -2.13
snR43snR43 TMA20P89886 181 aaPredicted RBP1.76□□□□□ -2.13
snR43snR43 DDI2P0CH63 225 aa1.75□□□□□ -2.13
snR43snR43 DDI3P0CH64 225 aa1.75□□□□□ -2.13
snR43snR43 FCY2P17064 533 aa1.75□□□□□ -2.13
snR43snR43 SEC22P22214 214 aa1.75□□□□□ -2.13
snR43snR43 MRPL3P36516 390 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms