RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C MBF1O14467 151 aaKnown RBP1.77□□□□□ -2.13
RPC40YPR110C YCR090CP25654 182 aaKnown RBP1.77□□□□□ -2.13
RPC40YPR110C RPC19P28000 142 aaKnown RBP1.77□□□□□ -2.13
RPC40YPR110C OCH1P31755 480 aa1.77□□□□□ -2.13
RPC40YPR110C VTC1P40046 129 aaRIP-Chip data1.77□□□□□ -2.13not detected
RPC40YPR110C YER135CP40082 130 aa1.77□□□□□ -2.13
RPC40YPR110C SKI6P46948 246 aaPredicted RBP1.77□□□□□ -2.13
RPC40YPR110C UBC12P52491 188 aa1.77□□□□□ -2.13
RPC40YPR110C YNL184CP53876 108 aa1.77□□□□□ -2.13
RPC40YPR110C YNL140CP53910 189 aa1.77□□□□□ -2.13
RPC40YPR110C YLR460CP54007 376 aa1.77□□□□□ -2.13
RPC40YPR110C YDR274CP87283 123 aa1.77□□□□□ -2.13
RPC40YPR110C ODC2Q99297 307 aa1.77□□□□□ -2.13
RPC40YPR110C CPA1P07258 411 aaKnown RBP1.76□□□□□ -2.13
RPC40YPR110C FPR1P20081 114 aaKnown RBP1.76□□□□□ -2.13
RPC40YPR110C FES1P38260 290 aa1.76□□□□□ -2.13
RPC40YPR110C YBR209WP38311 105 aa1.76□□□□□ -2.13
RPC40YPR110C SHG1P38337 142 aa1.76□□□□□ -2.13
RPC40YPR110C CYC2P38909 366 aa1.76□□□□□ -2.13
RPC40YPR110C MTW1P39731 289 aa1.76□□□□□ -2.13
RPC40YPR110C TMA22P47089 198 aaPredicted RBP1.76□□□□□ -2.13
RPC40YPR110C ARP3P47117 449 aaKnown RBP1.76□□□□□ -2.13
RPC40YPR110C LSM3P57743 89 aaKnown RBP1.76□□□□□ -2.13
RPC40YPR110C NHP10Q03435 203 aa1.76□□□□□ -2.13
RPC40YPR110C YPL225WQ08971 146 aaKnown RBP1.76□□□□□ -2.13
RPC40YPR110C GTT2Q12390 233 aa1.76□□□□□ -2.13
RPC40YPR110C VPS13Q07878 3144 aa1.75□□□□□ -2.13
RPC40YPR110C BUB2P26448 306 aaPredicted RBP1.75□□□□□ -2.13
RPC40YPR110C PTC1P35182 281 aa1.75□□□□□ -2.13
RPC40YPR110C YKR041WP36134 250 aa1.75□□□□□ -2.13
RPC40YPR110C FMP23P38231 175 aa1.75□□□□□ -2.13
RPC40YPR110C AME1P38313 324 aa1.75□□□□□ -2.13
RPC40YPR110C PDS1P40316 373 aaPredicted RBP1.75□□□□□ -2.13
RPC40YPR110C BAT2P47176 376 aaKnown RBP1.75□□□□□ -2.13
RPC40YPR110C POP3P53833 195 aaPredicted RBP1.75□□□□□ -2.13
RPC40YPR110C NRK1P53915 240 aa1.75□□□□□ -2.13
RPC40YPR110C YDR476CQ03362 224 aa1.75□□□□□ -2.13
RPC40YPR110C FMN1Q03778 218 aa1.75□□□□□ -2.13
RPC40YPR110C SPC24Q04477 213 aa1.75□□□□□ -2.13
RPC40YPR110C YMR315WQ04869 349 aaKnown RBP1.75□□□□□ -2.13
RPC40YPR110C NOC4Q06512 552 aaPredicted RBP1.75□□□□□ -2.13
RPC40YPR110C ATG10Q07879 167 aa1.75□□□□□ -2.13
RPC40YPR110C YLR031WQ07978 186 aa1.75□□□□□ -2.13
RPC40YPR110C YDL085C-AQ3E7B7 68 aaKnown RBP1.75□□□□□ -2.13
RPC40YPR110C IGO2Q9P305 131 aa1.75□□□□□ -2.13
RPC40YPR110C YPR117WQ06116 2489 aa1.75□□□□□ -2.13
RPC40YPR110C SNF4P12904 322 aa1.74□□□□□ -2.13
RPC40YPR110C TRR1P29509 319 aaKnown RBP1.74□□□□□ -2.13
RPC40YPR110C TFC1P32367 649 aa1.74□□□□□ -2.13
RPC40YPR110C RPS1AP33442 255 aaKnown RBP1.74□□□□□ -2.13
RPC40YPR110C SRX1P36077 127 aa1.74□□□□□ -2.13
RPC40YPR110C CAF4P36130 643 aa1.74□□□□□ -2.13
RPC40YPR110C YEL073CP39974 107 aa1.74□□□□□ -2.13
RPC40YPR110C YEA4P40004 342 aa1.74□□□□□ -2.13
RPC40YPR110C YER076CP40049 302 aa1.74□□□□□ -2.13
RPC40YPR110C SER2P42941 309 aa1.74□□□□□ -2.13
RPC40YPR110C TDA4P47153 279 aa1.74□□□□□ -2.13
RPC40YPR110C ARO8P53090 500 aaKnown RBP1.74□□□□□ -2.13
RPC40YPR110C JAC1P53193 184 aa1.74□□□□□ -2.13
RPC40YPR110C SAY1P53324 424 aa1.74□□□□□ -2.13
RPC40YPR110C DYN3Q04949 312 aa1.74□□□□□ -2.13
RPC40YPR110C ANT1Q06497 328 aa1.74□□□□□ -2.13
RPC40YPR110C YOL024WQ08172 172 aa1.74□□□□□ -2.13
RPC40YPR110C YPR202WQ08993 238 aa1.74□□□□□ -2.13
RPC40YPR110C FAS1P07149 2051 aaKnown RBP1.74□□□□□ -2.13
RPC40YPR110C MSB2P32334 1306 aa1.73□□□□□ -2.13
RPC40YPR110C SLH1P53327 1967 aaKnown RBP1.73□□□□□ -2.13
RPC40YPR110C YLR236CA0A023PZG4 107 aa1.73□□□□□ -2.13
RPC40YPR110C QCR2P07257 368 aa1.73□□□□□ -2.13
RPC40YPR110C TAH1P25638 111 aaPredicted RBP1.73□□□□□ -2.13
RPC40YPR110C CLG1P35190 452 aa1.73□□□□□ -2.13
RPC40YPR110C FIG1P38224 298 aa1.73□□□□□ -2.13
RPC40YPR110C AIM2P39721 246 aa1.73□□□□□ -2.13
RPC40YPR110C GIM4P40005 111 aaKnown RBP1.73□□□□□ -2.13
RPC40YPR110C LSM4P40070 187 aaKnown RBP1.73□□□□□ -2.13
RPC40YPR110C HPM1P40481 377 aa1.73□□□□□ -2.13
RPC40YPR110C YFR054CP43622 192 aa1.73□□□□□ -2.13
RPC40YPR110C YJR111CP47148 283 aaKnown RBP1.73□□□□□ -2.13
RPC40YPR110C NUP49Q02199 472 aa1.73□□□□□ -2.13
RPC40YPR110C NSL1Q12143 216 aa1.73□□□□□ -2.13
RPC40YPR110C MDM35O60200 86 aa1.72□□□□□ -2.13
RPC40YPR110C TMA19P35691 167 aaKnown RBP1.72□□□□□ -2.13
RPC40YPR110C PAN3P36102 679 aaPredicted RBP1.72□□□□□ -2.13
RPC40YPR110C YER134CP40081 178 aa1.72□□□□□ -2.13
RPC40YPR110C FMP32P43557 207 aa1.72□□□□□ -2.13
RPC40YPR110C KNH1P50112 268 aa1.72□□□□□ -2.13
RPC40YPR110C MPC3P53311 146 aa1.72□□□□□ -2.13
RPC40YPR110C MET31Q03081 177 aa1.72□□□□□ -2.13
RPC40YPR110C RRP17Q04031 235 aaPredicted RBP1.72□□□□□ -2.13
RPC40YPR110C YLR162WQ06235 118 aa1.72□□□□□ -2.13
RPC40YPR110C BRX1Q08235 291 aaKnown RBP1.72□□□□□ -2.13
RPC40YPR110C DGA1Q08650 418 aa1.72□□□□□ -2.13
RPC40YPR110C YKL018C-AQ3E7A7 99 aa1.72□□□□□ -2.13
RPC40YPR110C CYR1P08678 2026 aaKnown RBP1.71□□□□□ -2.14
RPC40YPR110C POR1P04840 283 aaKnown RBP1.71□□□□□ -2.14
RPC40YPR110C TRX3P25372 127 aa1.71□□□□□ -2.14
RPC40YPR110C ARO7P32178 256 aa1.71□□□□□ -2.14
RPC40YPR110C DER1P38307 211 aa1.71□□□□□ -2.14
RPC40YPR110C YBR219CP38317 127 aa1.71□□□□□ -2.14
RPC40YPR110C VMA22P38784 181 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms